RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 POLR3AO14802 1390 aaPredicted RBP25.14■■□□□ 1.62
SEMA6C-210ENST00000621728 ESCO1Q5FWF5 840 aa25.12■■□□□ 1.61
SEMA6C-210ENST00000621728 ORAI2Q96SN7 254 aa25.12■■□□□ 1.61
SEMA6C-210ENST00000621728 PHF8Q9UPP1 1060 aa25.12■■□□□ 1.61
SEMA6C-210ENST00000621728 NCOA3Q9Y6Q9 1424 aa25.12■■□□□ 1.61
SEMA6C-210ENST00000621728 TTC21BQ7Z4L5 1316 aa25.11■■□□□ 1.61
SEMA6C-210ENST00000621728 C1orf167Q5SNV9 1468 aa25.1■■□□□ 1.61
SEMA6C-210ENST00000621728 SSH2Q76I76 1423 aa25.1■■□□□ 1.61
SEMA6C-210ENST00000621728 PNISRQ8TF01 805 aaKnown RBP25.1■■□□□ 1.61
SEMA6C-210ENST00000621728 ATF3P18847 181 aa25.09■■□□□ 1.61
SEMA6C-210ENST00000621728 MST1RQ04912 1400 aa25.09■■□□□ 1.61
SEMA6C-210ENST00000621728 MSH6P52701 1360 aa25.08■■□□□ 1.6
SEMA6C-210ENST00000621728 DCCP43146 1447 aa25.07■■□□□ 1.6
SEMA6C-210ENST00000621728 FBLN1P23142 703 aa25.06■■□□□ 1.6
SEMA6C-210ENST00000621728 PIK3C2AO00443 1686 aa25.03■■□□□ 1.6
SEMA6C-210ENST00000621728 GTF3C3Q9Y5Q9 886 aa25.03■■□□□ 1.6
SEMA6C-210ENST00000621728 CADPS2Q86UW7 1296 aa25.02■■□□□ 1.6
SEMA6C-210ENST00000621728 MTHFSP49914 203 aa25.02■■□□□ 1.6
SEMA6C-210ENST00000621728 FOXO3O43524 673 aa25.01■■□□□ 1.59
SEMA6C-210ENST00000621728 XPCQ01831 940 aaPredicted RBP25.01■■□□□ 1.59
SEMA6C-210ENST00000621728 COG3Q96JB2 828 aa25■■□□□ 1.59
SEMA6C-210ENST00000621728 KIF1AQ12756 1690 aa25■■□□□ 1.59
SEMA6C-210ENST00000621728 OVOS2A0A0J9YW53 1432 aa24.99■■□□□ 1.59
SEMA6C-210ENST00000621728 OVOS2Q6IE36 1432 aa24.99■■□□□ 1.59
SEMA6C-210ENST00000621728 TTC21AQ8NDW8 1320 aa24.99■■□□□ 1.59
SEMA6C-210ENST00000621728 PAK3O75914 559 aaPredicted RBP24.99■■□□□ 1.59
SEMA6C-210ENST00000621728 SENP3-EIF4A1A0A087X0R7 540 aa24.98■■□□□ 1.59
SEMA6C-210ENST00000621728 PSME1Q06323 249 aa24.98■■□□□ 1.59
SEMA6C-210ENST00000621728 MAP2P11137 1827 aaKnown RBP24.98■■□□□ 1.59
SEMA6C-210ENST00000621728 NUTM2GQ5VZR2 741 aa24.98■■□□□ 1.59
SEMA6C-210ENST00000621728 AEBP2Q6ZN18 517 aaPredicted RBP24.98■■□□□ 1.59
SEMA6C-210ENST00000621728 LTBP4Q8N2S1 1624 aa24.98■■□□□ 1.59
SEMA6C-210ENST00000621728 HNRNPUQ00839 825 aaKnown RBP eCLIP24.97■■□□□ 1.59
SEMA6C-210ENST00000621728 DDX17Q92841 729 aaKnown RBP24.97■■□□□ 1.59
SEMA6C-210ENST00000621728 MARF1Q9Y4F3 1742 aaKnown RBP24.97■■□□□ 1.59
SEMA6C-210ENST00000621728 SHPRHQ149N8 1683 aa24.95■■□□□ 1.58
SEMA6C-210ENST00000621728 TRPM3Q9HCF6 1732 aaPredicted RBP24.93■■□□□ 1.58
SEMA6C-210ENST00000621728 SOX12O15370 315 aa24.93■■□□□ 1.58
SEMA6C-210ENST00000621728 POLKQ9UBT6 870 aa24.93■■□□□ 1.58
SEMA6C-210ENST00000621728 EMILIN1Q9Y6C2 1016 aa24.92■■□□□ 1.58
SEMA6C-210ENST00000621728 RRS1Q15050 365 aaKnown RBP24.92■■□□□ 1.58
SEMA6C-210ENST00000621728 ABTB2Q8N961 1025 aa24.92■■□□□ 1.58
SEMA6C-210ENST00000621728 ADAMTS8Q9UP79 889 aa24.92■■□□□ 1.58
SEMA6C-210ENST00000621728 USP31Q70CQ4 1352 aa24.91■■□□□ 1.58
SEMA6C-210ENST00000621728 NLRP6P59044 892 aa24.91■■□□□ 1.58
SEMA6C-210ENST00000621728 KRT28Q7Z3Y7 464 aa24.91■■□□□ 1.58
SEMA6C-210ENST00000621728 PPM1GO15355 546 aaPredicted RBP24.9■■□□□ 1.58
SEMA6C-210ENST00000621728 SLAIN2Q9P270 581 aa24.9■■□□□ 1.58
SEMA6C-210ENST00000621728 COL3A1P02461 1466 aaPredicted RBP24.9■■□□□ 1.58
SEMA6C-210ENST00000621728 WDR43Q15061 677 aaKnown RBP eCLIP24.9■■□□□ 1.58
SEMA6C-210ENST00000621728 BRINP3Q76B58 766 aa24.9■■□□□ 1.58
SEMA6C-210ENST00000621728 USP54Q70EL1 1684 aa24.89■■□□□ 1.58
SEMA6C-210ENST00000621728 AATKQ6ZMQ8 1374 aa24.89■■□□□ 1.57
SEMA6C-210ENST00000621728 CFAP53Q96M91 514 aa24.88■■□□□ 1.57
SEMA6C-210ENST00000621728 PLEKHG5O94827 1062 aa24.86■■□□□ 1.57
SEMA6C-210ENST00000621728 SMG6Q86US8 1419 aaKnown RBP24.85■■□□□ 1.57
SEMA6C-210ENST00000621728 PEAK1Q9H792 1746 aa24.85■■□□□ 1.57
SEMA6C-210ENST00000621728 LMOD2Q6P5Q4 547 aa24.84■■□□□ 1.57
SEMA6C-210ENST00000621728 BLMP54132 1417 aaPredicted RBP24.84■■□□□ 1.57
SEMA6C-210ENST00000621728 ALS2Q96Q42 1657 aa24.84■■□□□ 1.57
SEMA6C-210ENST00000621728 PNPLA6Q8IY17 1366 aa24.83■■□□□ 1.57
SEMA6C-210ENST00000621728 PXDNQ92626 1479 aa24.83■■□□□ 1.57
SEMA6C-210ENST00000621728 NPHP3Q7Z494 1330 aa24.82■■□□□ 1.56
SEMA6C-210ENST00000621728 CCDC146Q8IYE0 955 aa24.81■■□□□ 1.56
SEMA6C-210ENST00000621728 CDK12Q9NYV4 1490 aaPredicted RBP24.81■■□□□ 1.56
SEMA6C-210ENST00000621728 MYT1Q01538 1121 aa24.8■■□□□ 1.56
SEMA6C-210ENST00000621728 MAP3K19Q56UN5 1328 aa24.79■■□□□ 1.56
SEMA6C-210ENST00000621728 INSRP06213 1382 aa24.78■■□□□ 1.56
SEMA6C-210ENST00000621728 DIAPH1O60610 1272 aaKnown RBP24.78■■□□□ 1.56
SEMA6C-210ENST00000621728 SALL2Q9Y467 1007 aaPredicted RBP24.78■■□□□ 1.56
SEMA6C-210ENST00000621728 U2SURPO15042 1029 aaKnown RBP24.77■■□□□ 1.56
SEMA6C-210ENST00000621728 NFAT5O94916 1531 aa24.77■■□□□ 1.56
SEMA6C-210ENST00000621728 U2AF1L5P0DN76 240 aaPredicted RBP24.76■■□□□ 1.55
SEMA6C-210ENST00000621728 U2AF1Q01081 240 aaKnown RBP eCLIP24.76■■□□□ 1.55
SEMA6C-210ENST00000621728 SBNO1A3KN83 1393 aa24.76■■□□□ 1.55
SEMA6C-210ENST00000621728 ZBED9Q6R2W3 1325 aa24.75■■□□□ 1.55
SEMA6C-210ENST00000621728 LTN1O94822 1766 aa24.75■■□□□ 1.55
SEMA6C-210ENST00000621728 TNS3Q68CZ2 1445 aa24.75■■□□□ 1.55
SEMA6C-210ENST00000621728 NHSL1Q5SYE7 1610 aa24.75■■□□□ 1.55
SEMA6C-210ENST00000621728 SLIT3O75094 1523 aa24.74■■□□□ 1.55
SEMA6C-210ENST00000621728 ROBO1Q9Y6N7 1651 aa24.74■■□□□ 1.55
SEMA6C-210ENST00000621728 MED1Q15648 1581 aaPredicted RBP24.74■■□□□ 1.55
SEMA6C-210ENST00000621728 HSP90AB2PQ58FF8 381 aa24.74■■□□□ 1.55
SEMA6C-210ENST00000621728 IL13P35225 146 aa24.73■■□□□ 1.55
SEMA6C-210ENST00000621728 USP19O94966 1318 aa24.72■■□□□ 1.55
SEMA6C-210ENST00000621728 SPATA31A3Q5VYP0 1347 aa24.72■■□□□ 1.55
SEMA6C-210ENST00000621728 NUDCQ9Y266 331 aa24.72■■□□□ 1.55
SEMA6C-210ENST00000621728 SOS2Q07890 1332 aaPredicted RBP24.71■■□□□ 1.55
SEMA6C-210ENST00000621728 AMPHP49418 695 aa24.71■■□□□ 1.55
SEMA6C-210ENST00000621728 ZBTB7CA1YPR0 619 aa24.7■■□□□ 1.54
SEMA6C-210ENST00000621728 GCP02774 474 aa24.7■■□□□ 1.54
SEMA6C-210ENST00000621728 EIF4A2Q14240 407 aaKnown RBP24.7■■□□□ 1.54
SEMA6C-210ENST00000621728 CABLES1Q8TDN4 633 aa24.69■■□□□ 1.54
SEMA6C-210ENST00000621728 PHRF1Q9P1Y6 1649 aaKnown RBP24.69■■□□□ 1.54
SEMA6C-210ENST00000621728 FLT4P35916 1363 aa24.69■■□□□ 1.54
SEMA6C-210ENST00000621728 APAF1O14727 1248 aa24.68■■□□□ 1.54
SEMA6C-210ENST00000621728 CRYBG1Q9Y4K1 1723 aa24.68■■□□□ 1.54
SEMA6C-210ENST00000621728 HOXC9P31274 260 aa24.67■■□□□ 1.54
SEMA6C-210ENST00000621728 KCNH5Q8NCM2 988 aa24.67■■□□□ 1.54
SEMA6C-210ENST00000621728 HMOX1P09601 288 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms