RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 FAM161AQ3B820 660 aa4.21□□□□□ -1.74
U1.39-201ENST00000621562 NPM2Q86SE8 214 aaKnown RBP4.21□□□□□ -1.74
U1.39-201ENST00000621562 MORC1Q86VD1 984 aa4.21□□□□□ -1.74
U1.39-201ENST00000621562 WDR63Q8IWG1 891 aa4.21□□□□□ -1.74
U1.39-201ENST00000621562 TCP11L2Q8N4U5 519 aa4.21□□□□□ -1.74
U1.39-201ENST00000621562 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.21□□□□□ -1.74
U1.39-201ENST00000621562 PLEKHF1Q96S99 279 aa4.21□□□□□ -1.74
U1.39-201ENST00000621562 ZBTB47Q9UFB7 747 aaPredicted RBP4.21□□□□□ -1.74
U1.39-201ENST00000621562 SETD1BQ9UPS6 1966 aaKnown RBP4.21□□□□□ -1.74
U1.39-201ENST00000621562 TCHHQ07283 1943 aa4.21□□□□□ -1.74
U1.39-201ENST00000621562 PIK3R4Q99570 1358 aa4.2□□□□□ -1.74
U1.39-201ENST00000621562 VGFO15240 615 aaPredicted RBP4.2□□□□□ -1.74
U1.39-201ENST00000621562 CHGAP10645 457 aaKnown RBP4.2□□□□□ -1.74
U1.39-201ENST00000621562 MTHFSP49914 203 aa4.2□□□□□ -1.74
U1.39-201ENST00000621562 PANK1Q8TE04 598 aa4.2□□□□□ -1.74
U1.39-201ENST00000621562 CLUAP1Q96AJ1 413 aa4.2□□□□□ -1.74
U1.39-201ENST00000621562 CABP2Q9NPB3 220 aa4.2□□□□□ -1.74
U1.39-201ENST00000621562 SLC52A1Q9NWF4 448 aa4.2□□□□□ -1.74
U1.39-201ENST00000621562 TRIM35Q9UPQ4 493 aa4.2□□□□□ -1.74
U1.39-201ENST00000621562 RRP7AQ9Y3A4 280 aaKnown RBP4.2□□□□□ -1.74
U1.39-201ENST00000621562 CHD2O14647 1828 aaKnown RBP4.2□□□□□ -1.74
U1.39-201ENST00000621562 PTCH1Q13635 1447 aa4.2□□□□□ -1.74
U1.39-201ENST00000621562 EDC4Q6P2E9 1401 aaKnown RBP4.2□□□□□ -1.74
U1.39-201ENST00000621562 IL16Q14005 1332 aa4.2□□□□□ -1.74
U1.39-201ENST00000621562 KDM3BQ7LBC6 1761 aa4.19□□□□□ -1.74
U1.39-201ENST00000621562 ZNF142P52746 1687 aaPredicted RBP4.19□□□□□ -1.74
U1.39-201ENST00000621562 NPM1P06748 294 aaKnown RBP eCLIP4.19□□□□□ -1.74
U1.39-201ENST00000621562 NBR1Q14596 966 aa4.19□□□□□ -1.74
U1.39-201ENST00000621562 NUTM2DQ5VT03 806 aaPredicted RBP4.19□□□□□ -1.74
U1.39-201ENST00000621562 LAS1LQ9Y4W2 734 aaKnown RBP4.19□□□□□ -1.74
U1.39-201ENST00000621562 PCDHB15Q9Y5E8 787 aa4.19□□□□□ -1.74
U1.39-201ENST00000621562 PHRF1Q9P1Y6 1649 aaKnown RBP4.19□□□□□ -1.74
U1.39-201ENST00000621562 SIPA1L3O60292 1781 aaPredicted RBP4.19□□□□□ -1.74
U1.39-201ENST00000621562 OVOS2A0A0J9YW53 1432 aa4.19□□□□□ -1.74
U1.39-201ENST00000621562 OVOS2Q6IE36 1432 aa4.19□□□□□ -1.74
U1.39-201ENST00000621562 ADAMTS13Q76LX8 1427 aa4.19□□□□□ -1.74
U1.39-201ENST00000621562 DIP2AQ14689 1571 aa4.19□□□□□ -1.74
U1.39-201ENST00000621562 CRYBG1Q9Y4K1 1723 aa4.18□□□□□ -1.74
U1.39-201ENST00000621562 SLIT1O75093 1534 aa4.18□□□□□ -1.74
U1.39-201ENST00000621562 FYB1O15117 783 aa4.18□□□□□ -1.74
U1.39-201ENST00000621562 CT47B1P0C2W7 299 aaPredicted RBP4.18□□□□□ -1.74
U1.39-201ENST00000621562 TMPOP42166 694 aaKnown RBP4.18□□□□□ -1.74
U1.39-201ENST00000621562 TNNT2P45379 298 aaPredicted RBP4.18□□□□□ -1.74
U1.39-201ENST00000621562 AAMPQ13685 434 aa4.18□□□□□ -1.74
U1.39-201ENST00000621562 FBXO31Q5XUX0 539 aaPredicted RBP4.18□□□□□ -1.74
U1.39-201ENST00000621562 DDRGK1Q96HY6 314 aa4.18□□□□□ -1.74
U1.39-201ENST00000621562 COG6Q9Y2V7 657 aa4.18□□□□□ -1.74
U1.39-201ENST00000621562 NCOA3Q9Y6Q9 1424 aa4.18□□□□□ -1.74
U1.39-201ENST00000621562 NWD1Q149M9 1564 aa4.18□□□□□ -1.74
U1.39-201ENST00000621562 MINK1Q8N4C8 1332 aaPredicted RBP4.18□□□□□ -1.74
U1.39-201ENST00000621562 MAPK8IP3Q9UPT6 1336 aa4.18□□□□□ -1.74
U1.39-201ENST00000621562 ARHGAP23Q9P227 1491 aa4.18□□□□□ -1.74
U1.39-201ENST00000621562 METP08581 1390 aa4.17□□□□□ -1.74
U1.39-201ENST00000621562 AATKQ6ZMQ8 1374 aa4.17□□□□□ -1.74
U1.39-201ENST00000621562 LMO7Q8WWI1 1683 aa4.17□□□□□ -1.74
U1.39-201ENST00000621562 CAMTA1Q9Y6Y1 1673 aa4.17□□□□□ -1.74
U1.39-201ENST00000621562 PPM1GO15355 546 aaPredicted RBP4.17□□□□□ -1.74
U1.39-201ENST00000621562 SEC24BO95487 1268 aa4.17□□□□□ -1.74
U1.39-201ENST00000621562 RGS3P49796 1198 aa4.17□□□□□ -1.74
U1.39-201ENST00000621562 MVPQ14764 893 aaKnown RBP4.17□□□□□ -1.74
U1.39-201ENST00000621562 TSR2Q969E8 191 aaKnown RBP4.17□□□□□ -1.74
U1.39-201ENST00000621562 CFAP53Q96M91 514 aa4.17□□□□□ -1.74
U1.39-201ENST00000621562 PRAM1Q96QH2 718 aa4.17□□□□□ -1.74
U1.39-201ENST00000621562 RSPH6AQ9H0K4 717 aa4.17□□□□□ -1.74
U1.39-201ENST00000621562 GGNBP2Q9H3C7 697 aa4.17□□□□□ -1.74
U1.39-201ENST00000621562 USP35Q9P2H5 1018 aa4.17□□□□□ -1.74
U1.39-201ENST00000621562 PDZRN3Q9UPQ7 1066 aa4.17□□□□□ -1.74
U1.39-201ENST00000621562 RGS12O14924 1447 aa4.17□□□□□ -1.74
U1.39-201ENST00000621562 RGPD5Q99666 1765 aa4.17□□□□□ -1.74
U1.39-201ENST00000621562 MED1Q15648 1581 aaPredicted RBP4.16□□□□□ -1.74
U1.39-201ENST00000621562 SSH2Q76I76 1423 aa4.16□□□□□ -1.74
U1.39-201ENST00000621562 PTPRUQ92729 1446 aa4.16□□□□□ -1.74
U1.39-201ENST00000621562 TRIM27P14373 513 aa4.16□□□□□ -1.74
U1.39-201ENST00000621562 SLC4A3P48751 1232 aa4.16□□□□□ -1.74
U1.39-201ENST00000621562 BRPF1P55201 1214 aaPredicted RBP4.16□□□□□ -1.74
U1.39-201ENST00000621562 EXOSC9Q06265 439 aaKnown RBP4.16□□□□□ -1.74
U1.39-201ENST00000621562 SAFB2Q14151 953 aaKnown RBP eCLIP4.16□□□□□ -1.74
U1.39-201ENST00000621562 NFKBIBQ15653 356 aa4.16□□□□□ -1.74
U1.39-201ENST00000621562 NEUROD2Q15784 382 aa4.16□□□□□ -1.74
U1.39-201ENST00000621562 PMFBP1Q8TBY8 1022 aa4.16□□□□□ -1.74
U1.39-201ENST00000621562 SSH1Q8WYL5 1049 aa4.16□□□□□ -1.74
U1.39-201ENST00000621562 CDK19Q9BWU1 502 aa4.16□□□□□ -1.74
U1.39-201ENST00000621562 BCL2L13Q9BXK5 485 aa4.16□□□□□ -1.74
U1.39-201ENST00000621562 MYH16Q9H6N6 1097 aa4.16□□□□□ -1.74
U1.39-201ENST00000621562 PPP6R1Q9UPN7 881 aa4.16□□□□□ -1.74
U1.39-201ENST00000621562 PRR36Q9H6K5 1346 aa4.16□□□□□ -1.74
U1.39-201ENST00000621562 ATP10DQ9P241 1426 aa4.15□□□□□ -1.74
U1.39-201ENST00000621562 NEFMP07197 916 aa4.15□□□□□ -1.75
U1.39-201ENST00000621562 ZNF853P0CG23 659 aa4.15□□□□□ -1.75
U1.39-201ENST00000621562 U2AF1L5P0DN76 240 aaPredicted RBP4.15□□□□□ -1.75
U1.39-201ENST00000621562 SRPK2P78362 688 aaKnown RBP4.15□□□□□ -1.75
U1.39-201ENST00000621562 U2AF1Q01081 240 aaKnown RBP eCLIP4.15□□□□□ -1.75
U1.39-201ENST00000621562 HDAC1Q13547 482 aaPredicted RBP4.15□□□□□ -1.75
U1.39-201ENST00000621562 RTL5Q5HYW3 569 aaPredicted RBP4.15□□□□□ -1.75
U1.39-201ENST00000621562 ZKSCAN2Q63HK3 967 aa4.15□□□□□ -1.75
U1.39-201ENST00000621562 SMC5Q8IY18 1101 aa4.15□□□□□ -1.75
U1.39-201ENST00000621562 TBC1D32Q96NH3 1257 aa4.15□□□□□ -1.75
U1.39-201ENST00000621562 ANTXR1Q9H6X2 564 aa4.15□□□□□ -1.75
U1.39-201ENST00000621562 TERF2IPQ9NYB0 399 aa4.15□□□□□ -1.75
U1.39-201ENST00000621562 STK26Q9P289 416 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms