RNA–Protein interactions for RNA: ENST00000620578.4

COPS7B-224, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2 BASIC

Gene COPS7B, Length 2,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-224ENST00000620578 FOXO3O43524 673 aa20.37■□□□□ 0.85
COPS7B-224ENST00000620578 PAK3O75914 559 aaPredicted RBP20.37■□□□□ 0.85
COPS7B-224ENST00000620578 EDC4Q6P2E9 1401 aaKnown RBP20.37■□□□□ 0.85
COPS7B-224ENST00000620578 PHF8Q9UPP1 1060 aa20.36■□□□□ 0.85
COPS7B-224ENST00000620578 EMILIN1Q9Y6C2 1016 aa20.36■□□□□ 0.85
COPS7B-224ENST00000620578 WDR43Q15061 677 aaKnown RBP eCLIP20.35■□□□□ 0.85
COPS7B-224ENST00000620578 C19orf44Q9H6X5 657 aa20.35■□□□□ 0.85
COPS7B-224ENST00000620578 USP6P35125 1406 aa20.35■□□□□ 0.85
COPS7B-224ENST00000620578 TOPAZ1Q8N9V7 1692 aa20.34■□□□□ 0.85
COPS7B-224ENST00000620578 POLKQ9UBT6 870 aa20.33■□□□□ 0.85
COPS7B-224ENST00000620578 FMN2Q9NZ56 1722 aa20.33■□□□□ 0.85
COPS7B-224ENST00000620578 NWD1Q149M9 1564 aa20.33■□□□□ 0.85
COPS7B-224ENST00000620578 COG3Q96JB2 828 aa20.33■□□□□ 0.84
COPS7B-224ENST00000620578 NSD2O96028 1365 aa20.33■□□□□ 0.84
COPS7B-224ENST00000620578 AKAP12Q02952 1782 aa20.32■□□□□ 0.84
COPS7B-224ENST00000620578 ITSN1Q15811 1721 aa20.31■□□□□ 0.84
COPS7B-224ENST00000620578 MON2Q7Z3U7 1717 aa20.31■□□□□ 0.84
COPS7B-224ENST00000620578 POLR3AO14802 1390 aaPredicted RBP20.31■□□□□ 0.84
COPS7B-224ENST00000620578 ATF3P18847 181 aa20.3■□□□□ 0.84
COPS7B-224ENST00000620578 PSME1Q06323 249 aa20.3■□□□□ 0.84
COPS7B-224ENST00000620578 KIF20BQ96Q89 1820 aa20.29■□□□□ 0.84
COPS7B-224ENST00000620578 SSH2Q76I76 1423 aa20.29■□□□□ 0.84
COPS7B-224ENST00000620578 NLRP6P59044 892 aa20.29■□□□□ 0.84
COPS7B-224ENST00000620578 GTF3C3Q9Y5Q9 886 aa20.29■□□□□ 0.84
COPS7B-224ENST00000620578 ANKARQ7Z5J8 1434 aa20.29■□□□□ 0.84
COPS7B-224ENST00000620578 ABTB2Q8N961 1025 aa20.28■□□□□ 0.84
COPS7B-224ENST00000620578 LMOD2Q6P5Q4 547 aa20.28■□□□□ 0.84
COPS7B-224ENST00000620578 SCAF1Q9H7N4 1312 aaKnown RBP20.28■□□□□ 0.84
COPS7B-224ENST00000620578 U2SURPO15042 1029 aaKnown RBP20.27■□□□□ 0.84
COPS7B-224ENST00000620578 ZBED9Q6R2W3 1325 aa20.27■□□□□ 0.83
COPS7B-224ENST00000620578 U2AF1L5P0DN76 240 aaPredicted RBP20.25■□□□□ 0.83
COPS7B-224ENST00000620578 U2AF1Q01081 240 aaKnown RBP eCLIP20.25■□□□□ 0.83
COPS7B-224ENST00000620578 MAP2P11137 1827 aaKnown RBP20.25■□□□□ 0.83
COPS7B-224ENST00000620578 APAF1O14727 1248 aa20.25■□□□□ 0.83
COPS7B-224ENST00000620578 CDCA7LQ96GN5 454 aa20.25■□□□□ 0.83
COPS7B-224ENST00000620578 C1orf167Q5SNV9 1468 aa20.25■□□□□ 0.83
COPS7B-224ENST00000620578 NEUROD2Q15784 382 aa20.24■□□□□ 0.83
COPS7B-224ENST00000620578 RRP7AQ9Y3A4 280 aaKnown RBP20.24■□□□□ 0.83
COPS7B-224ENST00000620578 CFAP53Q96M91 514 aa20.24■□□□□ 0.83
COPS7B-224ENST00000620578 LRRC7Q96NW7 1537 aa20.23■□□□□ 0.83
COPS7B-224ENST00000620578 NRKQ7Z2Y5 1582 aa20.23■□□□□ 0.83
COPS7B-224ENST00000620578 ANKRD26Q9UPS8 1709 aa20.23■□□□□ 0.83
COPS7B-224ENST00000620578 XIRP1Q702N8 1843 aaKnown RBP20.22■□□□□ 0.83
COPS7B-224ENST00000620578 MST1RQ04912 1400 aa20.21■□□□□ 0.83
COPS7B-224ENST00000620578 HSP90AB2PQ58FF8 381 aa20.21■□□□□ 0.83
COPS7B-224ENST00000620578 OVOS2A0A0J9YW53 1432 aa20.21■□□□□ 0.83
COPS7B-224ENST00000620578 OVOS2Q6IE36 1432 aa20.21■□□□□ 0.83
COPS7B-224ENST00000620578 MSH6P52701 1360 aa20.2■□□□□ 0.82
COPS7B-224ENST00000620578 MYT1Q01538 1121 aa20.2■□□□□ 0.82
COPS7B-224ENST00000620578 KRT28Q7Z3Y7 464 aa20.2■□□□□ 0.82
COPS7B-224ENST00000620578 SHPRHQ149N8 1683 aa20.2■□□□□ 0.82
COPS7B-224ENST00000620578 BLMP54132 1417 aaPredicted RBP20.2■□□□□ 0.82
COPS7B-224ENST00000620578 ZBTB7CA1YPR0 619 aa20.2■□□□□ 0.82
COPS7B-224ENST00000620578 HMOX1P09601 288 aa20.2■□□□□ 0.82
COPS7B-224ENST00000620578 CADPS2Q86UW7 1296 aa20.2■□□□□ 0.82
COPS7B-224ENST00000620578 DIAPH1O60610 1272 aaKnown RBP20.19■□□□□ 0.82
COPS7B-224ENST00000620578 TTC21AQ8NDW8 1320 aa20.19■□□□□ 0.82
COPS7B-224ENST00000620578 PIK3C2AO00443 1686 aa20.18■□□□□ 0.82
COPS7B-224ENST00000620578 MAP3K19Q56UN5 1328 aa20.18■□□□□ 0.82
COPS7B-224ENST00000620578 COL3A1P02461 1466 aaPredicted RBP20.17■□□□□ 0.82
COPS7B-224ENST00000620578 DMRT2Q9Y5R5 561 aa20.17■□□□□ 0.82
COPS7B-224ENST00000620578 SLAIN2Q9P270 581 aa20.16■□□□□ 0.82
COPS7B-224ENST00000620578 PNPLA6Q8IY17 1366 aa20.16■□□□□ 0.82
COPS7B-224ENST00000620578 BRINP3Q76B58 766 aa20.15■□□□□ 0.82
COPS7B-224ENST00000620578 CABLES1Q8TDN4 633 aa20.15■□□□□ 0.82
COPS7B-224ENST00000620578 SUPT16HQ9Y5B9 1047 aaKnown RBP20.15■□□□□ 0.82
COPS7B-224ENST00000620578 IL13P35225 146 aa20.14■□□□□ 0.82
COPS7B-224ENST00000620578 TCP11L2Q8N4U5 519 aa20.14■□□□□ 0.82
COPS7B-224ENST00000620578 AATKQ6ZMQ8 1374 aa20.14■□□□□ 0.81
COPS7B-224ENST00000620578 SPINK5Q9NQ38 1064 aaPredicted RBP20.14■□□□□ 0.81
COPS7B-224ENST00000620578 IRX6P78412 446 aaPredicted RBP20.13■□□□□ 0.81
COPS7B-224ENST00000620578 LTV1Q96GA3 475 aaPredicted RBP20.13■□□□□ 0.81
COPS7B-224ENST00000620578 NUDCQ9Y266 331 aa20.13■□□□□ 0.81
COPS7B-224ENST00000620578 USP31Q70CQ4 1352 aa20.12■□□□□ 0.81
COPS7B-224ENST00000620578 EIF4A2Q14240 407 aaKnown RBP20.12■□□□□ 0.81
COPS7B-224ENST00000620578 AEBP1Q8IUX7 1158 aa20.12■□□□□ 0.81
COPS7B-224ENST00000620578 AMPHP49418 695 aa20.11■□□□□ 0.81
COPS7B-224ENST00000620578 RUNDC1Q96C34 613 aa20.11■□□□□ 0.81
COPS7B-224ENST00000620578 PHACTR3Q96KR7 559 aa20.11■□□□□ 0.81
COPS7B-224ENST00000620578 PLEKHF1Q96S99 279 aa20.1■□□□□ 0.81
COPS7B-224ENST00000620578 PEAK1Q9H792 1746 aa20.1■□□□□ 0.81
COPS7B-224ENST00000620578 PRKAR2BP31323 418 aa20.09■□□□□ 0.81
COPS7B-224ENST00000620578 NCOA3Q9Y6Q9 1424 aa20.09■□□□□ 0.81
COPS7B-224ENST00000620578 MARF1Q9Y4F3 1742 aaKnown RBP20.09■□□□□ 0.81
COPS7B-224ENST00000620578 ZC3H6P61129 1189 aaKnown RBP20.08■□□□□ 0.81
COPS7B-224ENST00000620578 DCCP43146 1447 aa20.08■□□□□ 0.8
COPS7B-224ENST00000620578 GCP02774 474 aa20.08■□□□□ 0.8
COPS7B-224ENST00000620578 RSPH6AQ9H0K4 717 aa20.06■□□□□ 0.8
COPS7B-224ENST00000620578 SULT6B1Q6IMI4 303 aa20.06■□□□□ 0.8
COPS7B-224ENST00000620578 SMG6Q86US8 1419 aaKnown RBP20.06■□□□□ 0.8
COPS7B-224ENST00000620578 INSRP06213 1382 aa20.05■□□□□ 0.8
COPS7B-224ENST00000620578 HOXC9P31274 260 aa20.05■□□□□ 0.8
COPS7B-224ENST00000620578 ZNF521Q96K83 1311 aa20.05■□□□□ 0.8
COPS7B-224ENST00000620578 CDK12Q9NYV4 1490 aaPredicted RBP20.05■□□□□ 0.8
COPS7B-224ENST00000620578 WWC1Q8IX03 1113 aa20.05■□□□□ 0.8
COPS7B-224ENST00000620578 USHBP1Q8N6Y0 703 aa20.04■□□□□ 0.8
COPS7B-224ENST00000620578 NPHP3Q7Z494 1330 aa20.04■□□□□ 0.8
COPS7B-224ENST00000620578 AEBP2Q6ZN18 517 aaPredicted RBP20.03■□□□□ 0.8
COPS7B-224ENST00000620578 AXIN2Q9Y2T1 843 aa20.03■□□□□ 0.8
COPS7B-224ENST00000620578 FKBP8Q14318 412 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms