RNA–Protein interactions for RNA: ENST00000619352.4

HMGN2-210, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN2, Length 1,148 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-210ENST00000619352 HRCP23327 699 aa9.74□□□□□ -0.85
HMGN2-210ENST00000619352 NPM2Q86SE8 214 aaKnown RBP9.74□□□□□ -0.85
HMGN2-210ENST00000619352 RNF225M0QZC1 329 aaPredicted RBP9.73□□□□□ -0.85
HMGN2-210ENST00000619352 CD46P15529 392 aa9.73□□□□□ -0.85
HMGN2-210ENST00000619352 KDM4AO75164 1064 aa9.72□□□□□ -0.85
HMGN2-210ENST00000619352 MRPL14Q6P1L8 145 aaKnown RBP9.72□□□□□ -0.85
HMGN2-210ENST00000619352 MPNDQ8N594 471 aa9.72□□□□□ -0.85
HMGN2-210ENST00000619352 JUNDP17535 347 aa9.71□□□□□ -0.86
HMGN2-210ENST00000619352 HLA-CQ95604 372 aa9.71□□□□□ -0.86
HMGN2-210ENST00000619352 USP46P62068 366 aa9.7□□□□□ -0.86
HMGN2-210ENST00000619352 SCARF1Q14162 830 aa9.7□□□□□ -0.86
HMGN2-210ENST00000619352 MINK1Q8N4C8 1332 aaPredicted RBP9.68□□□□□ -0.86
HMGN2-210ENST00000619352 IGHA1P01876 353 aa9.68□□□□□ -0.86
HMGN2-210ENST00000619352 PTCRAQ6ISU1 281 aaPredicted RBP9.68□□□□□ -0.86
HMGN2-210ENST00000619352 SH3BP2P78314 561 aa9.67□□□□□ -0.86
HMGN2-210ENST00000619352 FAM117AQ9C073 453 aa9.67□□□□□ -0.86
HMGN2-210ENST00000619352 PLEKHG3A1L390 1219 aa9.66□□□□□ -0.86
HMGN2-210ENST00000619352 HOXA2O43364 376 aa9.66□□□□□ -0.86
HMGN2-210ENST00000619352 MAP2K5Q13163 448 aa9.66□□□□□ -0.86
HMGN2-210ENST00000619352 NUDT12Q9BQG2 462 aa9.66□□□□□ -0.86
HMGN2-210ENST00000619352 ADAMTS8Q9UP79 889 aa9.66□□□□□ -0.86
HMGN2-210ENST00000619352 PURBQ96QR8 312 aaKnown RBP9.65□□□□□ -0.86
HMGN2-210ENST00000619352 TIMP2P16035 220 aa9.64□□□□□ -0.87
HMGN2-210ENST00000619352 GUCA2AQ02747 115 aa9.64□□□□□ -0.87
HMGN2-210ENST00000619352 AMHR2Q16671 573 aa9.64□□□□□ -0.87
HMGN2-210ENST00000619352 CCDC102AQ96A19 550 aa9.64□□□□□ -0.87
HMGN2-210ENST00000619352 SOBPA7XYQ1 873 aa9.63□□□□□ -0.87
HMGN2-210ENST00000619352 IRF6O14896 467 aa9.63□□□□□ -0.87
HMGN2-210ENST00000619352 PPFIA3O75145 1194 aa9.63□□□□□ -0.87
HMGN2-210ENST00000619352 NNTQ13423 1086 aa9.63□□□□□ -0.87
HMGN2-210ENST00000619352 DDRGK1Q96HY6 314 aa9.63□□□□□ -0.87
HMGN2-210ENST00000619352 KLF16Q9BXK1 252 aaPredicted RBP9.63□□□□□ -0.87
HMGN2-210ENST00000619352 C1orf115Q9H7X2 142 aa9.63□□□□□ -0.87
HMGN2-210ENST00000619352 DNMT3AQ9Y6K1 912 aaPredicted RBP9.63□□□□□ -0.87
HMGN2-210ENST00000619352 ADH1CP00326 375 aa9.62□□□□□ -0.87
HMGN2-210ENST00000619352 TLL2Q9Y6L7 1015 aa9.62□□□□□ -0.87
HMGN2-210ENST00000619352 FOXK2Q01167 660 aa9.61□□□□□ -0.87
HMGN2-210ENST00000619352 PARP9Q8IXQ6 854 aa9.61□□□□□ -0.87
HMGN2-210ENST00000619352 SYMPKQ92797 1274 aaKnown RBP9.61□□□□□ -0.87
HMGN2-210ENST00000619352 ARID3AQ99856 593 aa9.61□□□□□ -0.87
HMGN2-210ENST00000619352 VARSP26640 1264 aaKnown RBP9.6□□□□□ -0.87
HMGN2-210ENST00000619352 XP32Q5T750 250 aa9.6□□□□□ -0.87
HMGN2-210ENST00000619352 RETREG3Q86VR2 466 aa9.6□□□□□ -0.87
HMGN2-210ENST00000619352 RB1CC1Q8TDY2 1594 aa9.59□□□□□ -0.87
HMGN2-210ENST00000619352 WDR4P57081 412 aaKnown RBP9.59□□□□□ -0.87
HMGN2-210ENST00000619352 MAN1A2O60476 641 aa9.58□□□□□ -0.88
HMGN2-210ENST00000619352 KRT76Q01546 638 aa9.58□□□□□ -0.88
HMGN2-210ENST00000619352 CCNYL3P0C7X3 344 aa9.57□□□□□ -0.88
HMGN2-210ENST00000619352 MDM2Q00987 491 aaPredicted RBP9.57□□□□□ -0.88
HMGN2-210ENST00000619352 FLIIQ13045 1269 aa9.57□□□□□ -0.88
HMGN2-210ENST00000619352 ZBTB7CA1YPR0 619 aa9.56□□□□□ -0.88
HMGN2-210ENST00000619352 LINC01559Q495D7 138 aa9.56□□□□□ -0.88
HMGN2-210ENST00000619352 GPAT2Q6NUI2 795 aa9.56□□□□□ -0.88
HMGN2-210ENST00000619352 CCDC9Q9Y3X0 531 aaKnown RBP9.56□□□□□ -0.88
HMGN2-210ENST00000619352 PDIA4P13667 645 aaKnown RBP9.55□□□□□ -0.88
HMGN2-210ENST00000619352 UNC93B1Q9H1C4 597 aa9.55□□□□□ -0.88
HMGN2-210ENST00000619352 GOPCQ9HD26 462 aa9.55□□□□□ -0.88
HMGN2-210ENST00000619352 EVA1BQ9NVM1 165 aa9.55□□□□□ -0.88
HMGN2-210ENST00000619352 APBB1O00213 710 aa9.54□□□□□ -0.88
HMGN2-210ENST00000619352 MS4A1P11836 297 aa9.54□□□□□ -0.88
HMGN2-210ENST00000619352 KANK3Q6NY19 840 aa9.54□□□□□ -0.88
HMGN2-210ENST00000619352 PTPRNQ16849 979 aa9.53□□□□□ -0.88
HMGN2-210ENST00000619352 ZNF385CQ66K41 422 aaPredicted RBP9.53□□□□□ -0.88
HMGN2-210ENST00000619352 GPR161Q8N6U8 529 aaKnown RBP9.53□□□□□ -0.88
HMGN2-210ENST00000619352 ZNF511Q8NB15 262 aa9.53□□□□□ -0.88
HMGN2-210ENST00000619352 BAP1Q92560 729 aa9.53□□□□□ -0.88
HMGN2-210ENST00000619352 CNTNAP3BQ96NU0 1288 aa9.53□□□□□ -0.88
HMGN2-210ENST00000619352 CNTNAP3Q9BZ76 1288 aa9.53□□□□□ -0.88
HMGN2-210ENST00000619352 CDK15Q96Q40 435 aa9.52□□□□□ -0.89
HMGN2-210ENST00000619352 TTLL12Q14166 644 aaPredicted RBP9.51□□□□□ -0.89
HMGN2-210ENST00000619352 KRTAP4-8Q9BYQ9 185 aa9.51□□□□□ -0.89
HMGN2-210ENST00000619352 C6orf229H3BNL8 230 aa9.5□□□□□ -0.89
HMGN2-210ENST00000619352 ARHGEF15O94989 841 aa9.5□□□□□ -0.89
HMGN2-210ENST00000619352 KCNH2Q12809 1159 aa9.5□□□□□ -0.89
HMGN2-210ENST00000619352 NANOS1Q8WY41 292 aaKnown RBP9.5□□□□□ -0.89
HMGN2-210ENST00000619352 ARID3CA6NKF2 412 aa9.49□□□□□ -0.89
HMGN2-210ENST00000619352 SLURP2P0DP57 97 aa9.49□□□□□ -0.89
HMGN2-210ENST00000619352 FDX1P10109 184 aa9.49□□□□□ -0.89
HMGN2-210ENST00000619352 IRS1P35568 1242 aa9.49□□□□□ -0.89
HMGN2-210ENST00000619352 NUTM1Q86Y26 1132 aa9.49□□□□□ -0.89
HMGN2-210ENST00000619352 SOS2Q07890 1332 aaPredicted RBP9.49□□□□□ -0.89
HMGN2-210ENST00000619352 NACADO15069 1562 aa9.49□□□□□ -0.89
HMGN2-210ENST00000619352 ZIC2O95409 532 aaPredicted RBP9.48□□□□□ -0.89
HMGN2-210ENST00000619352 GIGYF2Q6Y7W6 1299 aaKnown RBP9.48□□□□□ -0.89
HMGN2-210ENST00000619352 SVOPQ8N4V2 548 aa9.48□□□□□ -0.89
HMGN2-210ENST00000619352 FAM217BQ9NTX9 383 aaPredicted RBP9.48□□□□□ -0.89
HMGN2-210ENST00000619352 PCDHGC3Q9UN70 934 aa9.48□□□□□ -0.89
HMGN2-210ENST00000619352 C6orf118Q5T5N4 469 aa9.47□□□□□ -0.89
HMGN2-210ENST00000619352 FAM174AQ8TBP5 190 aa9.47□□□□□ -0.89
HMGN2-210ENST00000619352 ITPKCQ96DU7 683 aa9.47□□□□□ -0.89
HMGN2-210ENST00000619352 COL25A1Q9BXS0 654 aaPredicted RBP9.47□□□□□ -0.89
HMGN2-210ENST00000619352 ZFAND3Q9H8U3 227 aa9.47□□□□□ -0.89
HMGN2-210ENST00000619352 GPCPD1Q9NPB8 672 aa9.47□□□□□ -0.89
HMGN2-210ENST00000619352 DNMT3LQ9UJW3 386 aa9.47□□□□□ -0.89
HMGN2-210ENST00000619352 UNC13AQ9UPW8 1703 aa9.47□□□□□ -0.89
HMGN2-210ENST00000619352 A6NJR5 290 aa9.46□□□□□ -0.9
HMGN2-210ENST00000619352 UPP2O95045 317 aa9.46□□□□□ -0.9
HMGN2-210ENST00000619352 NR5A1Q13285 461 aa9.46□□□□□ -0.9
HMGN2-210ENST00000619352 ADAM23O75077 832 aa9.45□□□□□ -0.9
HMGN2-210ENST00000619352 LINC00528Q8N1L1 170 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms