RNA–Protein interactions for RNA: ENST00000619186.4

TP53-224, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,271 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-224ENST00000619186 PTPRMP28827 1452 aa14.09□□□□□ -0.15
TP53-224ENST00000619186 FBLN1P23142 703 aa14.09□□□□□ -0.15
TP53-224ENST00000619186 DEKP35659 375 aaKnown RBP14.09□□□□□ -0.15
TP53-224ENST00000619186 TNRQ92752 1358 aa14.09□□□□□ -0.15
TP53-224ENST00000619186 U2AF1L5P0DN76 240 aaPredicted RBP14.08□□□□□ -0.15
TP53-224ENST00000619186 U2AF1Q01081 240 aaKnown RBP eCLIP14.08□□□□□ -0.155e-7■■■■□ 23
TP53-224ENST00000619186 WAPLQ7Z5K2 1190 aa14.08□□□□□ -0.15
TP53-224ENST00000619186 RARSP54136 660 aaKnown RBP14.08□□□□□ -0.16
TP53-224ENST00000619186 CD163L1Q9NR16 1453 aa14.08□□□□□ -0.16
TP53-224ENST00000619186 YTHDC2Q9H6S0 1430 aaKnown RBP14.07□□□□□ -0.16
TP53-224ENST00000619186 FYB1O15117 783 aa14.06□□□□□ -0.16
TP53-224ENST00000619186 LTKP29376 864 aa14.06□□□□□ -0.16
TP53-224ENST00000619186 TSR2Q969E8 191 aaKnown RBP14.06□□□□□ -0.16
TP53-224ENST00000619186 CLUAP1Q96AJ1 413 aa14.06□□□□□ -0.16
TP53-224ENST00000619186 METP08581 1390 aa14.05□□□□□ -0.16
TP53-224ENST00000619186 ABCC11Q96J66 1382 aa14.05□□□□□ -0.16
TP53-224ENST00000619186 CANXP27824 592 aaKnown RBP14.04□□□□□ -0.16
TP53-224ENST00000619186 POGKQ9P215 609 aa14.04□□□□□ -0.16
TP53-224ENST00000619186 NLRP1Q9C000 1473 aa14.04□□□□□ -0.16
TP53-224ENST00000619186 U2SURPO15042 1029 aaKnown RBP14.04□□□□□ -0.16
TP53-224ENST00000619186 CHMP4AQ9BY43 222 aa14.04□□□□□ -0.16
TP53-224ENST00000619186 PCDHB15Q9Y5E8 787 aa14.04□□□□□ -0.16
TP53-224ENST00000619186 NRXN3Q9Y4C0 1643 aa14.04□□□□□ -0.16
TP53-224ENST00000619186 C3P01024 1663 aa14.04□□□□□ -0.16
TP53-224ENST00000619186 PDE3AQ14432 1141 aa14.03□□□□□ -0.16
TP53-224ENST00000619186 FAM161AQ3B820 660 aa14.03□□□□□ -0.16
TP53-224ENST00000619186 NGEFQ8N5V2 710 aa14.03□□□□□ -0.16
TP53-224ENST00000619186 CFAP53Q96M91 514 aa14.03□□□□□ -0.16
TP53-224ENST00000619186 PLEKHF1Q96S99 279 aa14.03□□□□□ -0.16
TP53-224ENST00000619186 UBR1Q8IWV7 1749 aa14.03□□□□□ -0.16
TP53-224ENST00000619186 COL3A1P02461 1466 aaPredicted RBP14.03□□□□□ -0.16
TP53-224ENST00000619186 PUS7Q96PZ0 661 aaKnown RBP14.03□□□□□ -0.16
TP53-224ENST00000619186 SETD1AO15047 1707 aaKnown RBP14.03□□□□□ -0.16
TP53-224ENST00000619186 TXNDC2Q86VQ3 553 aa14.02□□□□□ -0.16
TP53-224ENST00000619186 WDR63Q8IWG1 891 aa14.02□□□□□ -0.16
TP53-224ENST00000619186 CABP1Q9NZU7 370 aa14.02□□□□□ -0.16
TP53-224ENST00000619186 ADGRB2O60241 1585 aa14.02□□□□□ -0.17
TP53-224ENST00000619186 CDK19Q9BWU1 502 aa14.02□□□□□ -0.17
TP53-224ENST00000619186 FER1L4A9Z1Z3 1794 aa14.01□□□□□ -0.17
TP53-224ENST00000619186 SEC24BO95487 1268 aa14.01□□□□□ -0.17
TP53-224ENST00000619186 TRIM35Q9UPQ4 493 aa14.01□□□□□ -0.17
TP53-224ENST00000619186 NSD2O96028 1365 aa14.01□□□□□ -0.17
TP53-224ENST00000619186 TMEM2Q9UHN6 1383 aa14.01□□□□□ -0.17
TP53-224ENST00000619186 CCDC27Q2M243 656 aa14.01□□□□□ -0.17
TP53-224ENST00000619186 SLC26A8Q96RN1 970 aa13.99□□□□□ -0.17
TP53-224ENST00000619186 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.99□□□□□ -0.17
TP53-224ENST00000619186 USP19O94966 1318 aa13.98□□□□□ -0.17
TP53-224ENST00000619186 NCKAP5LQ9HCH0 1330 aa13.98□□□□□ -0.17
TP53-224ENST00000619186 TMPOP42166 694 aaKnown RBP13.98□□□□□ -0.17
TP53-224ENST00000619186 EXOSC9Q06265 439 aaKnown RBP13.98□□□□□ -0.17
TP53-224ENST00000619186 NEFMP07197 916 aa13.97□□□□□ -0.17
TP53-224ENST00000619186 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.97□□□□□ -0.17
TP53-224ENST00000619186 ATAD2Q6PL18 1390 aa13.97□□□□□ -0.17
TP53-224ENST00000619186 UBE2Q2Q8WVN8 375 aa13.96□□□□□ -0.17
TP53-224ENST00000619186 TERF2IPQ9NYB0 399 aa13.96□□□□□ -0.17
TP53-224ENST00000619186 PPM1GO15355 546 aaPredicted RBP13.95□□□□□ -0.18
TP53-224ENST00000619186 ZRANB1Q9UGI0 708 aa13.95□□□□□ -0.18
TP53-224ENST00000619186 ANKRD26Q9UPS8 1709 aa13.95□□□□□ -0.18
TP53-224ENST00000619186 ADAMTS13Q76LX8 1427 aa13.95□□□□□ -0.18
TP53-224ENST00000619186 NPM3O75607 178 aaKnown RBP13.95□□□□□ -0.18
TP53-224ENST00000619186 RTL5Q5HYW3 569 aaPredicted RBP13.94□□□□□ -0.18
TP53-224ENST00000619186 SSH1Q8WYL5 1049 aa13.94□□□□□ -0.18
TP53-224ENST00000619186 MYH16Q9H6N6 1097 aa13.94□□□□□ -0.18
TP53-224ENST00000619186 NINLQ9Y2I6 1382 aa13.94□□□□□ -0.18
TP53-224ENST00000619186 RIPK4P57078 832 aa13.93□□□□□ -0.18
TP53-224ENST00000619186 SAMD1Q6SPF0 538 aaPredicted RBP13.93□□□□□ -0.18
TP53-224ENST00000619186 RIMS1Q86UR5 1692 aaKnown RBP13.93□□□□□ -0.18
TP53-224ENST00000619186 PNPLA6Q8IY17 1366 aa13.93□□□□□ -0.18
TP53-224ENST00000619186 TRIM27P14373 513 aa13.93□□□□□ -0.18
TP53-224ENST00000619186 POLKQ9UBT6 870 aa13.93□□□□□ -0.18
TP53-224ENST00000619186 PDZRN3Q9UPQ7 1066 aa13.93□□□□□ -0.18
TP53-224ENST00000619186 VIRMAQ69YN4 1812 aaKnown RBP13.92□□□□□ -0.18
TP53-224ENST00000619186 ROBO2Q9HCK4 1378 aa13.92□□□□□ -0.18
TP53-224ENST00000619186 NUTM2FA1L443 756 aa13.92□□□□□ -0.18
TP53-224ENST00000619186 DIAPH1O60610 1272 aaKnown RBP13.92□□□□□ -0.18
TP53-224ENST00000619186 CDK11BP21127 795 aaKnown RBP13.92□□□□□ -0.18
TP53-224ENST00000619186 DDRGK1Q96HY6 314 aa13.92□□□□□ -0.18
TP53-224ENST00000619186 PHACTR3Q96KR7 559 aa13.92□□□□□ -0.18
TP53-224ENST00000619186 THUMPD2Q9BTF0 503 aaKnown RBP13.92□□□□□ -0.18
TP53-224ENST00000619186 SMC4Q9NTJ3 1288 aa13.92□□□□□ -0.18
TP53-224ENST00000619186 KIF20BQ96Q89 1820 aa13.92□□□□□ -0.18
TP53-224ENST00000619186 HDGFP51858 240 aaKnown RBP13.92□□□□□ -0.18
TP53-224ENST00000619186 MVPQ14764 893 aaKnown RBP13.92□□□□□ -0.18
TP53-224ENST00000619186 HDGFL2Q7Z4V5 671 aaPredicted RBP13.92□□□□□ -0.18
TP53-224ENST00000619186 CNKSR2Q8WXI2 1034 aa13.92□□□□□ -0.18
TP53-224ENST00000619186 EMILIN1Q9Y6C2 1016 aa13.92□□□□□ -0.18
TP53-224ENST00000619186 MAPK8IP3Q9UPT6 1336 aa13.91□□□□□ -0.18
TP53-224ENST00000619186 MED14O60244 1454 aa13.91□□□□□ -0.18
TP53-224ENST00000619186 LRRC7Q96NW7 1537 aa13.91□□□□□ -0.18
TP53-224ENST00000619186 HMOX1P09601 288 aa13.91□□□□□ -0.18
TP53-224ENST00000619186 PTPRUQ92729 1446 aa13.91□□□□□ -0.18
TP53-224ENST00000619186 NME9Q86XW9 330 aa13.9□□□□□ -0.18
TP53-224ENST00000619186 ZKSCAN2Q63HK3 967 aa13.9□□□□□ -0.18
TP53-224ENST00000619186 DZIP1LQ8IYY4 767 aaKnown RBP13.9□□□□□ -0.18
TP53-224ENST00000619186 NOB1Q9ULX3 412 aaKnown RBP13.9□□□□□ -0.18
TP53-224ENST00000619186 MAP2P11137 1827 aaKnown RBP13.9□□□□□ -0.18
TP53-224ENST00000619186 PRKAR2BP31323 418 aa13.89□□□□□ -0.19
TP53-224ENST00000619186 RSPH6AQ9H0K4 717 aa13.89□□□□□ -0.19
TP53-224ENST00000619186 DLC1Q96QB1 1528 aa13.89□□□□□ -0.19
TP53-224ENST00000619186 WASLO00401 505 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms