RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 DRC7Q8IY82 874 aa17.03■□□□□ 0.32
CNOT3-210ENST00000618939 PLEKHH1Q9ULM0 1364 aa17.02■□□□□ 0.32
CNOT3-210ENST00000618939 PHF14O94880 888 aa17.02■□□□□ 0.32
CNOT3-210ENST00000618939 CSPP1Q1MSJ5 1256 aa17.02■□□□□ 0.32
CNOT3-210ENST00000618939 WAPLQ7Z5K2 1190 aa17.02■□□□□ 0.32
CNOT3-210ENST00000618939 THUMPD2Q9BTF0 503 aaKnown RBP17.02■□□□□ 0.32
CNOT3-210ENST00000618939 DIAPH3Q9NSV4 1193 aa17.02■□□□□ 0.32
CNOT3-210ENST00000618939 GAS2L2Q8NHY3 880 aa17.02■□□□□ 0.32
CNOT3-210ENST00000618939 CCDC61Q9Y6R9 512 aa17.02■□□□□ 0.32
CNOT3-210ENST00000618939 IGHDP01880 384 aa17.01■□□□□ 0.31
CNOT3-210ENST00000618939 HTATSF1O43719 755 aaKnown RBP17.01■□□□□ 0.31
CNOT3-210ENST00000618939 RNF123Q5XPI4 1314 aa17.01■□□□□ 0.31
CNOT3-210ENST00000618939 GNAI3P08754 354 aa17■□□□□ 0.31
CNOT3-210ENST00000618939 PSME1Q06323 249 aa17■□□□□ 0.31
CNOT3-210ENST00000618939 SLC4A2P04920 1241 aa17■□□□□ 0.31
CNOT3-210ENST00000618939 IL27Q8NEV9 243 aa17■□□□□ 0.31
CNOT3-210ENST00000618939 RSPH6AQ9H0K4 717 aa17■□□□□ 0.31
CNOT3-210ENST00000618939 PIK3C2GO75747 1445 aa17■□□□□ 0.31
CNOT3-210ENST00000618939 NUDT16Q96DE0 195 aaKnown RBP17■□□□□ 0.31
CNOT3-210ENST00000618939 NRDCO43847 1150 aa16.99■□□□□ 0.31
CNOT3-210ENST00000618939 RUFY2Q8WXA3 655 aa16.99■□□□□ 0.31
CNOT3-210ENST00000618939 UBTFL1P0CB47 393 aaPredicted RBP16.99■□□□□ 0.31
CNOT3-210ENST00000618939 TRIM27P14373 513 aa16.99■□□□□ 0.31
CNOT3-210ENST00000618939 MRE11P49959 708 aa16.99■□□□□ 0.31
CNOT3-210ENST00000618939 GORABQ5T7V8 394 aa16.99■□□□□ 0.31
CNOT3-210ENST00000618939 CCDC30Q5VVM6 783 aa16.99■□□□□ 0.31
CNOT3-210ENST00000618939 HSP90B1P14625 803 aaKnown RBP16.98■□□□□ 0.31
CNOT3-210ENST00000618939 ALDH1L2Q3SY69 923 aa16.98■□□□□ 0.31
CNOT3-210ENST00000618939 FBXO31Q5XUX0 539 aaPredicted RBP16.98■□□□□ 0.31
CNOT3-210ENST00000618939 MCTP1Q6DN14 999 aa16.98■□□□□ 0.31
CNOT3-210ENST00000618939 ATP6V1DQ9Y5K8 247 aa16.98■□□□□ 0.31
CNOT3-210ENST00000618939 RABEP1Q15276 862 aa16.98■□□□□ 0.31
CNOT3-210ENST00000618939 CEP170Q5SW79 1584 aa16.98■□□□□ 0.31
CNOT3-210ENST00000618939 POLR3AO14802 1390 aaPredicted RBP16.97■□□□□ 0.31
CNOT3-210ENST00000618939 NEXNQ0ZGT2 675 aa16.97■□□□□ 0.31
CNOT3-210ENST00000618939 CARD14Q9BXL6 1004 aa16.97■□□□□ 0.31
CNOT3-210ENST00000618939 IFIT2P09913 472 aaKnown RBP16.97■□□□□ 0.31
CNOT3-210ENST00000618939 HSP90AB4PQ58FF6 505 aa16.96■□□□□ 0.31
CNOT3-210ENST00000618939 DENND4BO75064 1496 aaPredicted RBP16.96■□□□□ 0.31
CNOT3-210ENST00000618939 ADGBQ8N7X0 1667 aa16.96■□□□□ 0.31
CNOT3-210ENST00000618939 ABTB2Q8N961 1025 aa16.95■□□□□ 0.3
CNOT3-210ENST00000618939 EMILIN1Q9Y6C2 1016 aa16.95■□□□□ 0.3
CNOT3-210ENST00000618939 GNAI2P04899 355 aa16.95■□□□□ 0.3
CNOT3-210ENST00000618939 ZKSCAN1P17029 563 aaPredicted RBP16.95■□□□□ 0.3
CNOT3-210ENST00000618939 NME9Q86XW9 330 aa16.95■□□□□ 0.3
CNOT3-210ENST00000618939 ABCC2Q92887 1545 aa16.95■□□□□ 0.3
CNOT3-210ENST00000618939 WDR7Q9Y4E6 1490 aa16.95■□□□□ 0.3
CNOT3-210ENST00000618939 SLC26A8Q96RN1 970 aa16.95■□□□□ 0.3
CNOT3-210ENST00000618939 ASXL2Q76L83 1435 aa16.94■□□□□ 0.3
CNOT3-210ENST00000618939 DDX58O95786 925 aaKnown RBP16.94■□□□□ 0.3
CNOT3-210ENST00000618939 IFT57Q9NWB7 429 aa16.94■□□□□ 0.3
CNOT3-210ENST00000618939 ANKRD36BQ8N2N9 1353 aa16.94■□□□□ 0.3
CNOT3-210ENST00000618939 MCM4P33991 863 aa16.94■□□□□ 0.3
CNOT3-210ENST00000618939 TAF7LQ5H9L4 462 aa16.94■□□□□ 0.3
CNOT3-210ENST00000618939 CCT4P50991 539 aaKnown RBP16.93■□□□□ 0.3
CNOT3-210ENST00000618939 ABCC10Q5T3U5 1492 aa16.93■□□□□ 0.3
CNOT3-210ENST00000618939 K7ELQ4 463 aaPredicted RBP16.93■□□□□ 0.3
CNOT3-210ENST00000618939 SURF6O75683 361 aaKnown RBP16.93■□□□□ 0.3
CNOT3-210ENST00000618939 GNL2Q13823 731 aaKnown RBP16.93■□□□□ 0.3
CNOT3-210ENST00000618939 PCDHB15Q9Y5E8 787 aa16.93■□□□□ 0.3
CNOT3-210ENST00000618939 NEK4P51957 841 aa16.92■□□□□ 0.3
CNOT3-210ENST00000618939 DCTN1Q14203 1278 aa16.92■□□□□ 0.3
CNOT3-210ENST00000618939 RPAP2Q8IXW5 612 aaPredicted RBP16.92■□□□□ 0.3
CNOT3-210ENST00000618939 G3BP1Q13283 466 aaKnown RBP eCLIP16.92■□□□□ 0.31e-5■■■■□ 21.3
CNOT3-210ENST00000618939 CCDC27Q2M243 656 aa16.91■□□□□ 0.3
CNOT3-210ENST00000618939 TTC5Q8N0Z6 440 aa16.91■□□□□ 0.3
CNOT3-210ENST00000618939 ERC2O15083 957 aa16.91■□□□□ 0.3
CNOT3-210ENST00000618939 ZNF518AQ6AHZ1 1483 aa16.91■□□□□ 0.3
CNOT3-210ENST00000618939 MBD5Q9P267 1494 aa16.91■□□□□ 0.3
CNOT3-210ENST00000618939 NPC1L1Q9UHC9 1359 aa16.91■□□□□ 0.3
CNOT3-210ENST00000618939 SPINK5Q9NQ38 1064 aaPredicted RBP16.91■□□□□ 0.3
CNOT3-210ENST00000618939 IL16Q14005 1332 aa16.91■□□□□ 0.3
CNOT3-210ENST00000618939 MAST1Q9Y2H9 1570 aa16.91■□□□□ 0.3
CNOT3-210ENST00000618939 WASLO00401 505 aaPredicted RBP16.91■□□□□ 0.3
CNOT3-210ENST00000618939 C8orf34Q49A92 452 aa16.91■□□□□ 0.3
CNOT3-210ENST00000618939 TBC1D2Q9BYX2 928 aa16.91■□□□□ 0.3
CNOT3-210ENST00000618939 CCDC9Q9Y3X0 531 aaKnown RBP16.91■□□□□ 0.3
CNOT3-210ENST00000618939 HDGFL1Q5TGJ6 251 aa16.9■□□□□ 0.3
CNOT3-210ENST00000618939 FYB1O15117 783 aa16.9■□□□□ 0.3
CNOT3-210ENST00000618939 KIF3AQ9Y496 699 aa16.9■□□□□ 0.3
CNOT3-210ENST00000618939 CIZ1Q9ULV3 898 aaPredicted RBP16.9■□□□□ 0.3
CNOT3-210ENST00000618939 ARHGEF5Q12774 1597 aa16.89■□□□□ 0.29
CNOT3-210ENST00000618939 SMC3Q9UQE7 1217 aa16.89■□□□□ 0.29
CNOT3-210ENST00000618939 INSRP06213 1382 aa16.89■□□□□ 0.29
CNOT3-210ENST00000618939 MCM10Q7L590 875 aa16.88■□□□□ 0.29
CNOT3-210ENST00000618939 NPHP1O15259 732 aa16.88■□□□□ 0.29
CNOT3-210ENST00000618939 NASPP49321 788 aaPredicted RBP16.88■□□□□ 0.29
CNOT3-210ENST00000618939 CLASRPQ8N2M8 674 aaKnown RBP16.88■□□□□ 0.29
CNOT3-210ENST00000618939 MCM2P49736 904 aa16.88■□□□□ 0.29
CNOT3-210ENST00000618939 PUS7Q96PZ0 661 aaKnown RBP16.88■□□□□ 0.29
CNOT3-210ENST00000618939 LRRCC1Q9C099 1032 aa16.88■□□□□ 0.29
CNOT3-210ENST00000618939 THEMISQ8N1K5 641 aaPredicted RBP16.87■□□□□ 0.29
CNOT3-210ENST00000618939 RAPGEF4Q8WZA2 1011 aa16.87■□□□□ 0.29
CNOT3-210ENST00000618939 BLMP54132 1417 aaPredicted RBP16.87■□□□□ 0.29
CNOT3-210ENST00000618939 ZMYM4Q5VZL5 1548 aa16.87■□□□□ 0.29
CNOT3-210ENST00000618939 H3BQV1 296 aa16.87■□□□□ 0.29
CNOT3-210ENST00000618939 IFFO2Q5TF58 517 aa16.87■□□□□ 0.29
CNOT3-210ENST00000618939 TBC1D32Q96NH3 1257 aa16.87■□□□□ 0.29
CNOT3-210ENST00000618939 RNF20Q5VTR2 975 aa16.87■□□□□ 0.29
CNOT3-210ENST00000618939 KDM5CP41229 1560 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms