RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 PLEKHG5O94827 1062 aa31.36■■■□□ 2.61
TRAF4-217ENST00000618771 CABLES1Q8TDN4 633 aa31.36■■■□□ 2.61
TRAF4-217ENST00000618771 ROCK2O75116 1388 aaKnown RBP31.35■■■□□ 2.61
TRAF4-217ENST00000618771 CCDC61Q9Y6R9 512 aa31.32■■■□□ 2.6
TRAF4-217ENST00000618771 PLCH1Q4KWH8 1693 aa31.32■■■□□ 2.6
TRAF4-217ENST00000618771 TONSLQ96HA7 1378 aa31.3■■■□□ 2.6
TRAF4-217ENST00000618771 CRYBG1Q9Y4K1 1723 aa31.29■■■□□ 2.6
TRAF4-217ENST00000618771 SRPK2P78362 688 aaKnown RBP31.29■■■□□ 2.6
TRAF4-217ENST00000618771 NWD2Q9ULI1 1742 aa31.29■■■□□ 2.6
TRAF4-217ENST00000618771 BRWD3Q6RI45 1802 aa31.28■■■□□ 2.6
TRAF4-217ENST00000618771 PAK3O75914 559 aaPredicted RBP31.28■■■□□ 2.6
TRAF4-217ENST00000618771 NBPF8Q3BBV2 869 aa31.28■■■□□ 2.6
TRAF4-217ENST00000618771 POLR3AO14802 1390 aaPredicted RBP31.28■■■□□ 2.6
TRAF4-217ENST00000618771 VPS72Q15906 364 aa31.26■■■□□ 2.59
TRAF4-217ENST00000618771 ACEP12821 1306 aa31.25■■■□□ 2.59
TRAF4-217ENST00000618771 BLMP54132 1417 aaPredicted RBP31.25■■■□□ 2.59
TRAF4-217ENST00000618771 PLEKHG3A1L390 1219 aa31.25■■■□□ 2.59
TRAF4-217ENST00000618771 SEPT12Q8IYM1 358 aa31.25■■■□□ 2.59
TRAF4-217ENST00000618771 CCDC9Q9Y3X0 531 aaKnown RBP31.25■■■□□ 2.59
TRAF4-217ENST00000618771 CABP2Q9NPB3 220 aa31.24■■■□□ 2.59
TRAF4-217ENST00000618771 PPIP5K1Q6PFW1 1433 aa31.24■■■□□ 2.59
TRAF4-217ENST00000618771 DEFB132Q7Z7B7 95 aa31.2■■■□□ 2.59
TRAF4-217ENST00000618771 COL14A1Q05707 1796 aaKnown RBP31.19■■■□□ 2.58
TRAF4-217ENST00000618771 PHRF1Q9P1Y6 1649 aaKnown RBP31.19■■■□□ 2.58
TRAF4-217ENST00000618771 EVC2Q86UK5 1308 aa31.19■■■□□ 2.58
TRAF4-217ENST00000618771 FAM83GA6ND36 823 aa31.18■■■□□ 2.58
TRAF4-217ENST00000618771 SF3B2Q13435 895 aaKnown RBP31.18■■■□□ 2.58
TRAF4-217ENST00000618771 ONECUT3O60422 494 aaPredicted RBP31.17■■■□□ 2.58
TRAF4-217ENST00000618771 NRAPQ86VF7 1730 aa31.17■■■□□ 2.58
TRAF4-217ENST00000618771 KRT27Q7Z3Y8 459 aa31.14■■■□□ 2.58
TRAF4-217ENST00000618771 CARD11Q9BXL7 1154 aa31.14■■■□□ 2.58
TRAF4-217ENST00000618771 A0A0G2JS52 829 aa31.12■■■□□ 2.57
TRAF4-217ENST00000618771 MYT1Q01538 1121 aa31.12■■■□□ 2.57
TRAF4-217ENST00000618771 NUTM2GQ5VZR2 741 aa31.11■■■□□ 2.57
TRAF4-217ENST00000618771 CABP1Q9NZU7 370 aa31.11■■■□□ 2.57
TRAF4-217ENST00000618771 BTG4Q9NY30 223 aa31.09■■■□□ 2.57
TRAF4-217ENST00000618771 SBNO2Q9Y2G9 1366 aa31.08■■■□□ 2.57
TRAF4-217ENST00000618771 ABTB2Q8N961 1025 aa31.08■■■□□ 2.57
TRAF4-217ENST00000618771 USP6P35125 1406 aa31.07■■■□□ 2.57
TRAF4-217ENST00000618771 AKAP12Q02952 1782 aa31.07■■■□□ 2.56
TRAF4-217ENST00000618771 BRD4O60885 1362 aaPredicted RBP31.07■■■□□ 2.56
TRAF4-217ENST00000618771 FAM98CQ17RN3 349 aaKnown RBP31.07■■■□□ 2.56
TRAF4-217ENST00000618771 PRDM11Q9NQV5 511 aa31.07■■■□□ 2.56
TRAF4-217ENST00000618771 NRKQ7Z2Y5 1582 aa31.06■■■□□ 2.56
TRAF4-217ENST00000618771 KIAA0232Q92628 1395 aa31.05■■■□□ 2.56
TRAF4-217ENST00000618771 USP19O94966 1318 aa31.01■■■□□ 2.56
TRAF4-217ENST00000618771 NLRP13Q86W25 1043 aa31■■■□□ 2.55
TRAF4-217ENST00000618771 BAG6P46379 1132 aa30.99■■■□□ 2.55
TRAF4-217ENST00000618771 ZC3H6P61129 1189 aaKnown RBP30.99■■■□□ 2.55
TRAF4-217ENST00000618771 PIK3C2AO00443 1686 aa30.99■■■□□ 2.55
TRAF4-217ENST00000618771 SSH2Q76I76 1423 aa30.98■■■□□ 2.55
TRAF4-217ENST00000618771 CHRNA2Q15822 529 aa30.98■■■□□ 2.55
TRAF4-217ENST00000618771 MON2Q7Z3U7 1717 aa30.96■■■□□ 2.55
TRAF4-217ENST00000618771 SPATA31A5Q5VU36 1347 aa30.96■■■□□ 2.55
TRAF4-217ENST00000618771 SPATA31A7Q8IWB4 1347 aa30.96■■■□□ 2.55
TRAF4-217ENST00000618771 FAM182BQ5T319 152 aa30.95■■■□□ 2.55
TRAF4-217ENST00000618771 ZNF692Q9BU19 519 aaPredicted RBP30.95■■■□□ 2.55
TRAF4-217ENST00000618771 PCGF6Q9BYE7 350 aa30.95■■■□□ 2.55
TRAF4-217ENST00000618771 CPDO75976 1380 aa30.94■■■□□ 2.54
TRAF4-217ENST00000618771 PSDA5PKW4 1024 aaPredicted RBP30.93■■■□□ 2.54
TRAF4-217ENST00000618771 LMO7Q8WWI1 1683 aa30.93■■■□□ 2.54
TRAF4-217ENST00000618771 CPSF1Q10570 1443 aaKnown RBP30.92■■■□□ 2.54
TRAF4-217ENST00000618771 NLRP6P59044 892 aa30.92■■■□□ 2.54
TRAF4-217ENST00000618771 SLIT3O75094 1523 aa30.92■■■□□ 2.54
TRAF4-217ENST00000618771 GCP02774 474 aa30.91■■■□□ 2.54
TRAF4-217ENST00000618771 CLSPNQ9HAW4 1339 aa30.9■■■□□ 2.54
TRAF4-217ENST00000618771 EN1Q05925 392 aaPredicted RBP30.89■■■□□ 2.54
TRAF4-217ENST00000618771 STRN4Q9NRL3 753 aa30.89■■■□□ 2.54
TRAF4-217ENST00000618771 CAMTA1Q9Y6Y1 1673 aa30.89■■■□□ 2.54
TRAF4-217ENST00000618771 TTC21BQ7Z4L5 1316 aa30.89■■■□□ 2.54
TRAF4-217ENST00000618771 KTN1Q86UP2 1357 aaKnown RBP30.89■■■□□ 2.54
TRAF4-217ENST00000618771 LRP5O75197 1615 aa30.87■■■□□ 2.53
TRAF4-217ENST00000618771 RGPD1P0DJD0 1748 aa30.87■■■□□ 2.53
TRAF4-217ENST00000618771 THSD7AQ9UPZ6 1657 aa30.87■■■□□ 2.53
TRAF4-217ENST00000618771 ST20-MTHFSA0A0A6YYL1 179 aa30.86■■■□□ 2.53
TRAF4-217ENST00000618771 TTC21AQ8NDW8 1320 aa30.86■■■□□ 2.53
TRAF4-217ENST00000618771 SPATA31A1Q5TZJ5 1347 aa30.85■■■□□ 2.53
TRAF4-217ENST00000618771 TESK2Q96S53 571 aa30.85■■■□□ 2.53
TRAF4-217ENST00000618771 CD163L1Q9NR16 1453 aa30.84■■■□□ 2.53
TRAF4-217ENST00000618771 TMC1Q8TDI8 760 aa30.84■■■□□ 2.53
TRAF4-217ENST00000618771 EVA1CP58658 441 aa30.83■■■□□ 2.53
TRAF4-217ENST00000618771 PUS7Q96PZ0 661 aaKnown RBP30.83■■■□□ 2.53
TRAF4-217ENST00000618771 TIMELESSQ9UNS1 1208 aa30.83■■■□□ 2.53
TRAF4-217ENST00000618771 USP47Q96K76 1375 aa30.8■■■□□ 2.52
TRAF4-217ENST00000618771 SLC12A5Q9H2X9 1139 aa30.8■■■□□ 2.52
TRAF4-217ENST00000618771 COL18A1P39060 1754 aa30.79■■■□□ 2.52
TRAF4-217ENST00000618771 USP54Q70EL1 1684 aa30.79■■■□□ 2.52
TRAF4-217ENST00000618771 COL5A2P05997 1499 aaPredicted RBP30.79■■■□□ 2.52
TRAF4-217ENST00000618771 ZBTB7CA1YPR0 619 aa30.79■■■□□ 2.52
TRAF4-217ENST00000618771 SLC24A1O60721 1099 aa30.78■■■□□ 2.52
TRAF4-217ENST00000618771 HDGFL2Q7Z4V5 671 aaPredicted RBP30.78■■■□□ 2.52
TRAF4-217ENST00000618771 TNS1Q9HBL0 1735 aaKnown RBP30.78■■■□□ 2.52
TRAF4-217ENST00000618771 AATKQ6ZMQ8 1374 aa30.78■■■□□ 2.52
TRAF4-217ENST00000618771 LARP1Q6PKG0 1096 aaKnown RBP30.77■■■□□ 2.52
TRAF4-217ENST00000618771 USP35Q9P2H5 1018 aa30.77■■■□□ 2.52
TRAF4-217ENST00000618771 DISP2A7MBM2 1401 aa30.76■■■□□ 2.51
TRAF4-217ENST00000618771 R3HDM1Q15032 1099 aaKnown RBP30.76■■■□□ 2.51
TRAF4-217ENST00000618771 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.76■■■□□ 2.51
TRAF4-217ENST00000618771 KCNH5Q8NCM2 988 aa30.76■■■□□ 2.51
TRAF4-217ENST00000618771 RGPD5Q99666 1765 aa30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms