RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 NKTRP30414 1462 aaKnown RBP33.43■■■□□ 2.94
VEGFC-202ENST00000618562 ANP32EQ9BTT0 268 aa33.43■■■□□ 2.94
VEGFC-202ENST00000618562 RRP1P56182 461 aaKnown RBP33.41■■■□□ 2.94
VEGFC-202ENST00000618562 ZNF692Q9BU19 519 aaPredicted RBP33.41■■■□□ 2.94
VEGFC-202ENST00000618562 PLEKHG3A1L390 1219 aa33.4■■■□□ 2.94
VEGFC-202ENST00000618562 CCDC136Q96JN2 1154 aa33.4■■■□□ 2.94
VEGFC-202ENST00000618562 RCAN3Q9UKA8 241 aa33.4■■■□□ 2.94
VEGFC-202ENST00000618562 RGPD8O14715 1765 aaPredicted RBP33.39■■■□□ 2.94
VEGFC-202ENST00000618562 NRKQ7Z2Y5 1582 aa33.39■■■□□ 2.94
VEGFC-202ENST00000618562 NME9Q86XW9 330 aa33.38■■■□□ 2.93
VEGFC-202ENST00000618562 CDCA7LQ96GN5 454 aa33.38■■■□□ 2.93
VEGFC-202ENST00000618562 COL3A1P02461 1466 aaPredicted RBP33.38■■■□□ 2.93
VEGFC-202ENST00000618562 ACEP12821 1306 aa33.37■■■□□ 2.93
VEGFC-202ENST00000618562 ZNF521Q96K83 1311 aa33.35■■■□□ 2.93
VEGFC-202ENST00000618562 APAF1O14727 1248 aa33.35■■■□□ 2.93
VEGFC-202ENST00000618562 NALCNQ8IZF0 1738 aa33.34■■■□□ 2.93
VEGFC-202ENST00000618562 FMN2Q9NZ56 1722 aa33.34■■■□□ 2.93
VEGFC-202ENST00000618562 ZRANB1Q9UGI0 708 aa33.32■■■□□ 2.92
VEGFC-202ENST00000618562 MAP2P11137 1827 aaKnown RBP33.32■■■□□ 2.92
VEGFC-202ENST00000618562 USP6P35125 1406 aa33.31■■■□□ 2.92
VEGFC-202ENST00000618562 PNPLA6Q8IY17 1366 aa33.3■■■□□ 2.92
VEGFC-202ENST00000618562 ANKARQ7Z5J8 1434 aa33.29■■■□□ 2.92
VEGFC-202ENST00000618562 FBLN1P23142 703 aa33.28■■■□□ 2.92
VEGFC-202ENST00000618562 TTC21BQ7Z4L5 1316 aa33.28■■■□□ 2.92
VEGFC-202ENST00000618562 POLKQ9UBT6 870 aa33.27■■■□□ 2.92
VEGFC-202ENST00000618562 SSH2Q76I76 1423 aa33.26■■■□□ 2.91
VEGFC-202ENST00000618562 IQSEC2Q5JU85 1478 aa33.25■■■□□ 2.91
VEGFC-202ENST00000618562 RUNDC1Q96C34 613 aa33.25■■■□□ 2.91
VEGFC-202ENST00000618562 COG3Q96JB2 828 aa33.25■■■□□ 2.91
VEGFC-202ENST00000618562 PMFBP1Q8TBY8 1022 aa33.25■■■□□ 2.91
VEGFC-202ENST00000618562 NWD1Q149M9 1564 aa33.24■■■□□ 2.91
VEGFC-202ENST00000618562 U2AF1L5P0DN76 240 aaPredicted RBP33.24■■■□□ 2.91
VEGFC-202ENST00000618562 U2AF1Q01081 240 aaKnown RBP eCLIP33.24■■■□□ 2.91
VEGFC-202ENST00000618562 AATKQ6ZMQ8 1374 aa33.23■■■□□ 2.91
VEGFC-202ENST00000618562 NGEFQ8N5V2 710 aa33.23■■■□□ 2.91
VEGFC-202ENST00000618562 RBM33Q96EV2 1170 aaKnown RBP33.22■■■□□ 2.91
VEGFC-202ENST00000618562 GOLGA2Q08379 1002 aa33.21■■■□□ 2.91
VEGFC-202ENST00000618562 ADGRL3Q9HAR2 1447 aa33.2■■■□□ 2.91
VEGFC-202ENST00000618562 OVOS2A0A0J9YW53 1432 aa33.19■■■□□ 2.9
VEGFC-202ENST00000618562 OVOS2Q6IE36 1432 aa33.19■■■□□ 2.9
VEGFC-202ENST00000618562 DIAPH1O60610 1272 aaKnown RBP33.19■■■□□ 2.9
VEGFC-202ENST00000618562 EMILIN1Q9Y6C2 1016 aa33.18■■■□□ 2.9
VEGFC-202ENST00000618562 U2SURPO15042 1029 aaKnown RBP33.17■■■□□ 2.9
VEGFC-202ENST00000618562 NGDNQ8NEJ9 315 aaKnown RBP33.17■■■□□ 2.9
VEGFC-202ENST00000618562 PPM1GO15355 546 aaPredicted RBP33.17■■■□□ 2.9
VEGFC-202ENST00000618562 TCP11L2Q8N4U5 519 aa33.17■■■□□ 2.9
VEGFC-202ENST00000618562 MSH5O43196 834 aa33.16■■■□□ 2.9
VEGFC-202ENST00000618562 DUSP27Q5VZP5 1158 aa33.16■■■□□ 2.9
VEGFC-202ENST00000618562 EXOC6Q8TAG9 804 aa33.16■■■□□ 2.9
VEGFC-202ENST00000618562 CDK12Q9NYV4 1490 aaPredicted RBP33.16■■■□□ 2.9
VEGFC-202ENST00000618562 TTC21AQ8NDW8 1320 aa33.14■■■□□ 2.9
VEGFC-202ENST00000618562 SLFN5Q08AF3 891 aa33.14■■■□□ 2.9
VEGFC-202ENST00000618562 KDM4FA0A1W2PPD8 638 aa33.12■■■□□ 2.89
VEGFC-202ENST00000618562 WWC1Q8IX03 1113 aa33.12■■■□□ 2.89
VEGFC-202ENST00000618562 RRP7AQ9Y3A4 280 aaKnown RBP33.12■■■□□ 2.89
VEGFC-202ENST00000618562 RRS1Q15050 365 aaKnown RBP33.11■■■□□ 2.89
VEGFC-202ENST00000618562 TRMT2AQ8IZ69 625 aaKnown RBP33.11■■■□□ 2.89
VEGFC-202ENST00000618562 PLEKHF1Q96S99 279 aa33.11■■■□□ 2.89
VEGFC-202ENST00000618562 SPINK5Q9NQ38 1064 aaPredicted RBP33.11■■■□□ 2.89
VEGFC-202ENST00000618562 DMRT2Q9Y5R5 561 aa33.11■■■□□ 2.89
VEGFC-202ENST00000618562 PHF23Q9BUL5 403 aaPredicted RBP33.1■■■□□ 2.89
VEGFC-202ENST00000618562 PIK3C2AO00443 1686 aa33.09■■■□□ 2.89
VEGFC-202ENST00000618562 NEUROD2Q15784 382 aa33.09■■■□□ 2.89
VEGFC-202ENST00000618562 USP31Q70CQ4 1352 aa33.08■■■□□ 2.89
VEGFC-202ENST00000618562 HSPA2P54652 639 aa33.05■■■□□ 2.88
VEGFC-202ENST00000618562 E9PSI1 815 aa33.05■■■□□ 2.88
VEGFC-202ENST00000618562 NCBP3Q53F19 620 aaKnown RBP33.05■■■□□ 2.88
VEGFC-202ENST00000618562 IL13P35225 146 aa33.04■■■□□ 2.88
VEGFC-202ENST00000618562 CCDC27Q2M243 656 aa33.04■■■□□ 2.88
VEGFC-202ENST00000618562 PHF8Q9UPP1 1060 aa33.04■■■□□ 2.88
VEGFC-202ENST00000618562 LRRC7Q96NW7 1537 aa33.04■■■□□ 2.88
VEGFC-202ENST00000618562 C14orf37Q86TY3 774 aa33.03■■■□□ 2.88
VEGFC-202ENST00000618562 PROSER2Q86WR7 435 aaPredicted RBP33.02■■■□□ 2.88
VEGFC-202ENST00000618562 STRCP1A6NGW2 1772 aa33.02■■■□□ 2.88
VEGFC-202ENST00000618562 PEAK1Q9H792 1746 aa33.01■■■□□ 2.87
VEGFC-202ENST00000618562 MARF1Q9Y4F3 1742 aaKnown RBP33■■■□□ 2.87
VEGFC-202ENST00000618562 FCHSD2O94868 740 aa33■■■□□ 2.87
VEGFC-202ENST00000618562 LMTK3Q96Q04 1460 aa32.99■■■□□ 2.87
VEGFC-202ENST00000618562 USP54Q70EL1 1684 aa32.99■■■□□ 2.87
VEGFC-202ENST00000618562 MAPK8IP3Q9UPT6 1336 aa32.99■■■□□ 2.87
VEGFC-202ENST00000618562 RSPH6AQ9H0K4 717 aa32.98■■■□□ 2.87
VEGFC-202ENST00000618562 PNNQ9H307 717 aaKnown RBP32.98■■■□□ 2.87
VEGFC-202ENST00000618562 WDR63Q8IWG1 891 aa32.97■■■□□ 2.87
VEGFC-202ENST00000618562 TMPOP42166 694 aaKnown RBP32.97■■■□□ 2.87
VEGFC-202ENST00000618562 PLIN1O60240 522 aa32.96■■■□□ 2.87
VEGFC-202ENST00000618562 ESCO1Q5FWF5 840 aa32.95■■■□□ 2.87
VEGFC-202ENST00000618562 TCERG1O14776 1098 aaKnown RBP32.93■■■□□ 2.86
VEGFC-202ENST00000618562 SOX12O15370 315 aa32.93■■■□□ 2.86
VEGFC-202ENST00000618562 PRKAR2BP31323 418 aa32.93■■■□□ 2.86
VEGFC-202ENST00000618562 HMOX1P09601 288 aa32.92■■■□□ 2.86
VEGFC-202ENST00000618562 NLRP6P59044 892 aa32.92■■■□□ 2.86
VEGFC-202ENST00000618562 ERICH6Q7L0X2 663 aa32.92■■■□□ 2.86
VEGFC-202ENST00000618562 CRBNQ96SW2 442 aa32.92■■■□□ 2.86
VEGFC-202ENST00000618562 STRCQ7RTU9 1775 aa32.9■■■□□ 2.86
VEGFC-202ENST00000618562 MAP3K19Q56UN5 1328 aa32.9■■■□□ 2.86
VEGFC-202ENST00000618562 TRIM35Q9UPQ4 493 aa32.9■■■□□ 2.86
VEGFC-202ENST00000618562 PAK3O75914 559 aaPredicted RBP32.89■■■□□ 2.86
VEGFC-202ENST00000618562 C19orf44Q9H6X5 657 aa32.89■■■□□ 2.86
VEGFC-202ENST00000618562 EIF4A2Q14240 407 aaKnown RBP32.89■■■□□ 2.86
VEGFC-202ENST00000618562 ABTB2Q8N961 1025 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms