RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-218	ENST00000617172	RALGAPB	Q86X10	1494 aa		13.84	□□□□□ -0.19
TARDBP-218	ENST00000617172	SEPT12	Q8IYM1	358 aa		13.83	□□□□□ -0.2
TARDBP-218	ENST00000617172	CABP2	Q9NPB3	220 aa		13.83	□□□□□ -0.2
TARDBP-218	ENST00000617172	PRDM11	Q9NQV5	511 aa		13.83	□□□□□ -0.2
TARDBP-218	ENST00000617172	EVC2	Q86UK5	1308 aa		13.83	□□□□□ -0.2
TARDBP-218	ENST00000617172	BRD4	O60885	1362 aa	Predicted RBP	13.83	□□□□□ -0.2
TARDBP-218	ENST00000617172	ROCK2	O75116	1388 aa	Known RBP	13.83	□□□□□ -0.2
TARDBP-218	ENST00000617172	TRIM26	Q12899	539 aa	Predicted RBP	13.82	□□□□□ -0.2
TARDBP-218	ENST00000617172	ABTB2	Q8N961	1025 aa		13.82	□□□□□ -0.2
TARDBP-218	ENST00000617172	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.81	□□□□□ -0.2
TARDBP-218	ENST00000617172	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.81	□□□□□ -0.2
TARDBP-218	ENST00000617172	NLRP13	Q86W25	1043 aa		13.81	□□□□□ -0.2
TARDBP-218	ENST00000617172	CABP1	Q9NZU7	370 aa		13.8	□□□□□ -0.2
TARDBP-218	ENST00000617172	ITSN1	Q15811	1721 aa		13.8	□□□□□ -0.2
TARDBP-218	ENST00000617172	PPIP5K1	Q6PFW1	1433 aa		13.8	□□□□□ -0.2
TARDBP-218	ENST00000617172	ALS2	Q96Q42	1657 aa		13.79	□□□□□ -0.2
TARDBP-218	ENST00000617172	NUTM2G	Q5VZR2	741 aa		13.79	□□□□□ -0.2
TARDBP-218	ENST00000617172	KRT27	Q7Z3Y8	459 aa		13.79	□□□□□ -0.2
TARDBP-218	ENST00000617172	ZNF692	Q9BU19	519 aa	Predicted RBP	13.79	□□□□□ -0.2
TARDBP-218	ENST00000617172	NWD2	Q9ULI1	1742 aa		13.78	□□□□□ -0.2
TARDBP-218	ENST00000617172	ZC3H6	P61129	1189 aa	Known RBP	13.78	□□□□□ -0.2
TARDBP-218	ENST00000617172	KIAA0232	Q92628	1395 aa		13.78	□□□□□ -0.2
TARDBP-218	ENST00000617172	GLI3	P10071	1580 aa		13.78	□□□□□ -0.2
TARDBP-218	ENST00000617172		A0A0G2JS52	829 aa		13.77	□□□□□ -0.21
TARDBP-218	ENST00000617172	MYT1	Q01538	1121 aa		13.77	□□□□□ -0.21
TARDBP-218	ENST00000617172	SF3B2	Q13435	895 aa	Known RBP	13.77	□□□□□ -0.21
TARDBP-218	ENST00000617172	FAM98C	Q17RN3	349 aa	Known RBP	13.77	□□□□□ -0.21
TARDBP-218	ENST00000617172	SPATA31A5	Q5VU36	1347 aa		13.77	□□□□□ -0.21
TARDBP-218	ENST00000617172	SPATA31A7	Q8IWB4	1347 aa		13.77	□□□□□ -0.21
TARDBP-218	ENST00000617172	TONSL	Q96HA7	1378 aa		13.77	□□□□□ -0.21
TARDBP-218	ENST00000617172	GC	P02774	474 aa		13.76	□□□□□ -0.21
TARDBP-218	ENST00000617172	EVA1C	P58658	441 aa		13.76	□□□□□ -0.21
TARDBP-218	ENST00000617172	CARD11	Q9BXL7	1154 aa		13.76	□□□□□ -0.21
TARDBP-218	ENST00000617172	EP400	Q96L91	3159 aa		13.76	□□□□□ -0.21
TARDBP-218	ENST00000617172	COL14A1	Q05707	1796 aa	Known RBP	13.76	□□□□□ -0.21
TARDBP-218	ENST00000617172	BLM	P54132	1417 aa	Predicted RBP	13.75	□□□□□ -0.21
TARDBP-218	ENST00000617172	USP19	O94966	1318 aa		13.75	□□□□□ -0.21
TARDBP-218	ENST00000617172	CHRNA2	Q15822	529 aa		13.75	□□□□□ -0.21
TARDBP-218	ENST00000617172	ZRANB1	Q9UGI0	708 aa		13.75	□□□□□ -0.21
TARDBP-218	ENST00000617172	ABCA3	Q99758	1704 aa		13.75	□□□□□ -0.21
TARDBP-218	ENST00000617172	CPD	O75976	1380 aa		13.74	□□□□□ -0.21
TARDBP-218	ENST00000617172	NLRP6	P59044	892 aa		13.74	□□□□□ -0.21
TARDBP-218	ENST00000617172	PLCH1	Q4KWH8	1693 aa		13.74	□□□□□ -0.21
TARDBP-218	ENST00000617172	TRPM1	Q7Z4N2	1603 aa		13.74	□□□□□ -0.21
TARDBP-218	ENST00000617172	TOPAZ1	Q8N9V7	1692 aa		13.73	□□□□□ -0.21
TARDBP-218	ENST00000617172	SPATA31A1	Q5TZJ5	1347 aa		13.73	□□□□□ -0.21
TARDBP-218	ENST00000617172	SLC24A1	O60721	1099 aa		13.73	□□□□□ -0.21
TARDBP-218	ENST00000617172	STRN4	Q9NRL3	753 aa		13.73	□□□□□ -0.21
TARDBP-218	ENST00000617172	USP6	P35125	1406 aa		13.73	□□□□□ -0.21
TARDBP-218	ENST00000617172	SBNO2	Q9Y2G9	1366 aa		13.72	□□□□□ -0.21
TARDBP-218	ENST00000617172	BARGIN	Q6ZT62	677 aa		13.71	□□□□□ -0.21
TARDBP-218	ENST00000617172	QRICH2	Q9H0J4	1663 aa		13.71	□□□□□ -0.21
TARDBP-218	ENST00000617172	TTC21A	Q8NDW8	1320 aa		13.7	□□□□□ -0.22
TARDBP-218	ENST00000617172	PUS7	Q96PZ0	661 aa	Known RBP	13.7	□□□□□ -0.22
TARDBP-218	ENST00000617172	THRAP3	Q9Y2W1	955 aa	Known RBP	13.7	□□□□□ -0.22
TARDBP-218	ENST00000617172	SSH2	Q76I76	1423 aa		13.7	□□□□□ -0.22
TARDBP-218	ENST00000617172	TTC21B	Q7Z4L5	1316 aa		13.69	□□□□□ -0.22
TARDBP-218	ENST00000617172	BAG6	P46379	1132 aa		13.69	□□□□□ -0.22
TARDBP-218	ENST00000617172	TCP11L2	Q8N4U5	519 aa		13.69	□□□□□ -0.22
TARDBP-218	ENST00000617172	KCNH5	Q8NCM2	988 aa		13.69	□□□□□ -0.22
TARDBP-218	ENST00000617172	NRAP	Q86VF7	1730 aa		13.69	□□□□□ -0.22
TARDBP-218	ENST00000617172	CRYBG1	Q9Y4K1	1723 aa		13.69	□□□□□ -0.22
TARDBP-218	ENST00000617172	LARP1	Q6PKG0	1096 aa	Known RBP	13.68	□□□□□ -0.22
TARDBP-218	ENST00000617172	FAM196A	Q6ZSG2	479 aa		13.68	□□□□□ -0.22
TARDBP-218	ENST00000617172	USP35	Q9P2H5	1018 aa		13.68	□□□□□ -0.22
TARDBP-218	ENST00000617172	AATK	Q6ZMQ8	1374 aa		13.68	□□□□□ -0.22
TARDBP-218	ENST00000617172	CPSF1	Q10570	1443 aa	Known RBP	13.67	□□□□□ -0.22
TARDBP-218	ENST00000617172	PDE3B	Q13370	1112 aa		13.67	□□□□□ -0.22
TARDBP-218	ENST00000617172	DEFB132	Q7Z7B7	95 aa		13.67	□□□□□ -0.22
TARDBP-218	ENST00000617172	KTN1	Q86UP2	1357 aa	Known RBP	13.67	□□□□□ -0.22
TARDBP-218	ENST00000617172	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.66	□□□□□ -0.22
TARDBP-218	ENST00000617172	C11orf95	C9JLR9	678 aa	Predicted RBP	13.66	□□□□□ -0.22
TARDBP-218	ENST00000617172	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.66	□□□□□ -0.22
TARDBP-218	ENST00000617172	CAMTA1	Q9Y6Y1	1673 aa		13.66	□□□□□ -0.22
TARDBP-218	ENST00000617172	ZBTB7C	A1YPR0	619 aa		13.65	□□□□□ -0.22
TARDBP-218	ENST00000617172	ARHGEF25	Q86VW2	580 aa		13.65	□□□□□ -0.22
TARDBP-218	ENST00000617172	TMC1	Q8TDI8	760 aa		13.65	□□□□□ -0.22
TARDBP-218	ENST00000617172	TERF2IP	Q9NYB0	399 aa		13.65	□□□□□ -0.22
TARDBP-218	ENST00000617172	NRK	Q7Z2Y5	1582 aa		13.65	□□□□□ -0.22
TARDBP-218	ENST00000617172	BRWD3	Q6RI45	1802 aa		13.64	□□□□□ -0.23
TARDBP-218	ENST00000617172	FAM182B	Q5T319	152 aa		13.64	□□□□□ -0.23
TARDBP-218	ENST00000617172	TIMELESS	Q9UNS1	1208 aa		13.64	□□□□□ -0.23
TARDBP-218	ENST00000617172	SRCAP	Q6ZRS2	3230 aa		13.63	□□□□□ -0.23
TARDBP-218	ENST00000617172	CRB1	P82279	1406 aa		13.63	□□□□□ -0.23
TARDBP-218	ENST00000617172	COL5A2	P05997	1499 aa	Predicted RBP	13.62	□□□□□ -0.23
TARDBP-218	ENST00000617172	ST20-MTHFS	A0A0A6YYL1	179 aa		13.62	□□□□□ -0.23
TARDBP-218	ENST00000617172	TOM1L2	Q6ZVM7	507 aa		13.62	□□□□□ -0.23
TARDBP-218	ENST00000617172	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
TARDBP-218	ENST00000617172	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.62	□□□□□ -0.23
TARDBP-218	ENST00000617172	SLC12A5	Q9H2X9	1139 aa		13.62	□□□□□ -0.23
TARDBP-218	ENST00000617172	SLIT3	O75094	1523 aa		13.62	□□□□□ -0.23
TARDBP-218	ENST00000617172	THSD7A	Q9UPZ6	1657 aa		13.62	□□□□□ -0.23
TARDBP-218	ENST00000617172	TRIM37	O94972	964 aa		13.61	□□□□□ -0.23
TARDBP-218	ENST00000617172	TESK2	Q96S53	571 aa		13.61	□□□□□ -0.23
TARDBP-218	ENST00000617172	AXIN2	Q9Y2T1	843 aa		13.61	□□□□□ -0.23
TARDBP-218	ENST00000617172	WDR17	Q8IZU2	1322 aa		13.61	□□□□□ -0.23
TARDBP-218	ENST00000617172	CLSPN	Q9HAW4	1339 aa		13.61	□□□□□ -0.23
TARDBP-218	ENST00000617172	USP31	Q70CQ4	1352 aa		13.6	□□□□□ -0.23
TARDBP-218	ENST00000617172	NINL	Q9Y2I6	1382 aa		13.6	□□□□□ -0.23
TARDBP-218	ENST00000617172	LMO7	Q8WWI1	1683 aa		13.6	□□□□□ -0.23

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