RNA–Protein interactions for RNA: ENST00000617122.1

NDUFB1-207, Transcript of NADH:ubiquinone oxidoreductase subunit B1, humanhuman

TSL 1 (best) BASIC

Gene NDUFB1, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB1-207ENST00000617122 UPF1Q92900 1129 aaKnown RBP eCLIP22.08■■□□□ 1.13
NDUFB1-207ENST00000617122 CCDC9Q9Y3X0 531 aaKnown RBP22.08■■□□□ 1.13
NDUFB1-207ENST00000617122 NBPF8Q3BBV2 869 aa22.07■■□□□ 1.12
NDUFB1-207ENST00000617122 SLIT2O94813 1529 aa22.06■■□□□ 1.12
NDUFB1-207ENST00000617122 NUTM2GQ5VZR2 741 aa22.06■■□□□ 1.12
NDUFB1-207ENST00000617122 GJD4Q96KN9 370 aaPredicted RBP22.06■■□□□ 1.12
NDUFB1-207ENST00000617122 PPIP5K1Q6PFW1 1433 aa22.06■■□□□ 1.12
NDUFB1-207ENST00000617122 NWD2Q9ULI1 1742 aa22.05■■□□□ 1.12
NDUFB1-207ENST00000617122 FAM83GA6ND36 823 aa22.04■■□□□ 1.12
NDUFB1-207ENST00000617122 PLEKHG3A1L390 1219 aa22.03■■□□□ 1.12
NDUFB1-207ENST00000617122 EVC2Q86UK5 1308 aa22.03■■□□□ 1.12
NDUFB1-207ENST00000617122 POLR3AO14802 1390 aaPredicted RBP22.02■■□□□ 1.12
NDUFB1-207ENST00000617122 CARD11Q9BXL7 1154 aa22.02■■□□□ 1.12
NDUFB1-207ENST00000617122 RALGAPBQ86X10 1494 aa22.02■■□□□ 1.12
NDUFB1-207ENST00000617122 CRYBG1Q9Y4K1 1723 aa22.01■■□□□ 1.11
NDUFB1-207ENST00000617122 COL14A1Q05707 1796 aaKnown RBP22.01■■□□□ 1.11
NDUFB1-207ENST00000617122 GLI3P10071 1580 aa22■■□□□ 1.11
NDUFB1-207ENST00000617122 ABTB2Q8N961 1025 aa22■■□□□ 1.11
NDUFB1-207ENST00000617122 BTG4Q9NY30 223 aa22■■□□□ 1.11
NDUFB1-207ENST00000617122 ATAD2Q6PL18 1390 aa21.99■■□□□ 1.11
NDUFB1-207ENST00000617122 PRDM11Q9NQV5 511 aa21.99■■□□□ 1.11
NDUFB1-207ENST00000617122 CABP1Q9NZU7 370 aa21.99■■□□□ 1.11
NDUFB1-207ENST00000617122 PHRF1Q9P1Y6 1649 aaKnown RBP21.98■■□□□ 1.11
NDUFB1-207ENST00000617122 A0A0G2JS52 829 aa21.98■■□□□ 1.11
NDUFB1-207ENST00000617122 MYT1Q01538 1121 aa21.98■■□□□ 1.11
NDUFB1-207ENST00000617122 VPS72Q15906 364 aa21.98■■□□□ 1.11
NDUFB1-207ENST00000617122 BRWD3Q6RI45 1802 aa21.96■■□□□ 1.11
NDUFB1-207ENST00000617122 ZC3H6P61129 1189 aaKnown RBP21.96■■□□□ 1.11
NDUFB1-207ENST00000617122 NRAPQ86VF7 1730 aa21.96■■□□□ 1.11
NDUFB1-207ENST00000617122 CHRNA2Q15822 529 aa21.95■■□□□ 1.1
NDUFB1-207ENST00000617122 KIAA0232Q92628 1395 aa21.94■■□□□ 1.1
NDUFB1-207ENST00000617122 PCGF6Q9BYE7 350 aa21.93■■□□□ 1.1
NDUFB1-207ENST00000617122 ZBTB7CA1YPR0 619 aa21.92■■□□□ 1.1
NDUFB1-207ENST00000617122 SEPT12Q8IYM1 358 aa21.92■■□□□ 1.1
NDUFB1-207ENST00000617122 STRN4Q9NRL3 753 aa21.92■■□□□ 1.1
NDUFB1-207ENST00000617122 NLRP13Q86W25 1043 aa21.91■■□□□ 1.1
NDUFB1-207ENST00000617122 FAM98CQ17RN3 349 aaKnown RBP21.9■■□□□ 1.1
NDUFB1-207ENST00000617122 USP6P35125 1406 aa21.89■■□□□ 1.1
NDUFB1-207ENST00000617122 NRKQ7Z2Y5 1582 aa21.89■■□□□ 1.09
NDUFB1-207ENST00000617122 AKAP12Q02952 1782 aa21.89■■□□□ 1.09
NDUFB1-207ENST00000617122 NLRP6P59044 892 aa21.88■■□□□ 1.09
NDUFB1-207ENST00000617122 EVA1CP58658 441 aa21.87■■□□□ 1.09
NDUFB1-207ENST00000617122 TMC1Q8TDI8 760 aa21.87■■□□□ 1.09
NDUFB1-207ENST00000617122 BRD4O60885 1362 aaPredicted RBP21.87■■□□□ 1.09
NDUFB1-207ENST00000617122 USP19O94966 1318 aa21.84■■□□□ 1.09
NDUFB1-207ENST00000617122 SPATA31A5Q5VU36 1347 aa21.84■■□□□ 1.09
NDUFB1-207ENST00000617122 SPATA31A7Q8IWB4 1347 aa21.84■■□□□ 1.09
NDUFB1-207ENST00000617122 GCP02774 474 aa21.84■■□□□ 1.09
NDUFB1-207ENST00000617122 KRT27Q7Z3Y8 459 aa21.84■■□□□ 1.09
NDUFB1-207ENST00000617122 ZNF692Q9BU19 519 aaPredicted RBP21.84■■□□□ 1.09
NDUFB1-207ENST00000617122 PIK3C2AO00443 1686 aa21.83■■□□□ 1.09
NDUFB1-207ENST00000617122 USP35Q9P2H5 1018 aa21.83■■□□□ 1.09
NDUFB1-207ENST00000617122 KTN1Q86UP2 1357 aaKnown RBP21.83■■□□□ 1.08
NDUFB1-207ENST00000617122 SBNO2Q9Y2G9 1366 aa21.83■■□□□ 1.08
NDUFB1-207ENST00000617122 SOX12O15370 315 aa21.82■■□□□ 1.08
NDUFB1-207ENST00000617122 TTC21BQ7Z4L5 1316 aa21.81■■□□□ 1.08
NDUFB1-207ENST00000617122 ONECUT3O60422 494 aaPredicted RBP21.81■■□□□ 1.08
NDUFB1-207ENST00000617122 ST20-MTHFSA0A0A6YYL1 179 aa21.8■■□□□ 1.08
NDUFB1-207ENST00000617122 EP400Q96L91 3159 aa21.8■■□□□ 1.08
NDUFB1-207ENST00000617122 MON2Q7Z3U7 1717 aa21.8■■□□□ 1.08
NDUFB1-207ENST00000617122 CPDO75976 1380 aa21.79■■□□□ 1.08
NDUFB1-207ENST00000617122 CCDC125Q86Z20 511 aa21.79■■□□□ 1.08
NDUFB1-207ENST00000617122 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.79■■□□□ 1.08
NDUFB1-207ENST00000617122 SSH2Q76I76 1423 aa21.79■■□□□ 1.08
NDUFB1-207ENST00000617122 SPATA31A1Q5TZJ5 1347 aa21.79■■□□□ 1.08
NDUFB1-207ENST00000617122 CAMTA1Q9Y6Y1 1673 aa21.79■■□□□ 1.08
NDUFB1-207ENST00000617122 SF3B2Q13435 895 aaKnown RBP21.78■■□□□ 1.08
NDUFB1-207ENST00000617122 HDGFL2Q7Z4V5 671 aaPredicted RBP21.78■■□□□ 1.08
NDUFB1-207ENST00000617122 LMO7Q8WWI1 1683 aa21.77■■□□□ 1.08
NDUFB1-207ENST00000617122 LARP1Q6PKG0 1096 aaKnown RBP21.77■■□□□ 1.08
NDUFB1-207ENST00000617122 TTC21AQ8NDW8 1320 aa21.77■■□□□ 1.07
NDUFB1-207ENST00000617122 SLIT3O75094 1523 aa21.76■■□□□ 1.07
NDUFB1-207ENST00000617122 CPSF1Q10570 1443 aaKnown RBP21.76■■□□□ 1.07
NDUFB1-207ENST00000617122 FAM182BQ5T319 152 aa21.76■■□□□ 1.07
NDUFB1-207ENST00000617122 SLC12A5Q9H2X9 1139 aa21.76■■□□□ 1.07
NDUFB1-207ENST00000617122 BLMP54132 1417 aaPredicted RBP21.75■■□□□ 1.07
NDUFB1-207ENST00000617122 THSD7AQ9UPZ6 1657 aa21.74■■□□□ 1.07
NDUFB1-207ENST00000617122 RGPD5Q99666 1765 aa21.74■■□□□ 1.07
NDUFB1-207ENST00000617122 KCNH5Q8NCM2 988 aa21.73■■□□□ 1.07
NDUFB1-207ENST00000617122 TERF2IPQ9NYB0 399 aa21.73■■□□□ 1.07
NDUFB1-207ENST00000617122 CCER1Q8TC90 406 aaPredicted RBP21.72■■□□□ 1.07
NDUFB1-207ENST00000617122 ZRANB1Q9UGI0 708 aa21.72■■□□□ 1.07
NDUFB1-207ENST00000617122 USP47Q96K76 1375 aa21.72■■□□□ 1.07
NDUFB1-207ENST00000617122 COL5A2P05997 1499 aaPredicted RBP21.71■■□□□ 1.07
NDUFB1-207ENST00000617122 DEFB132Q7Z7B7 95 aa21.71■■□□□ 1.07
NDUFB1-207ENST00000617122 TESK2Q96S53 571 aa21.71■■□□□ 1.07
NDUFB1-207ENST00000617122 NME9Q86XW9 330 aa21.7■■□□□ 1.06
NDUFB1-207ENST00000617122 TCP11L2Q8N4U5 519 aa21.7■■□□□ 1.06
NDUFB1-207ENST00000617122 CD163L1Q9NR16 1453 aa21.7■■□□□ 1.06
NDUFB1-207ENST00000617122 SLC24A1O60721 1099 aa21.69■■□□□ 1.06
NDUFB1-207ENST00000617122 CLSPNQ9HAW4 1339 aa21.69■■□□□ 1.06
NDUFB1-207ENST00000617122 AATKQ6ZMQ8 1374 aa21.69■■□□□ 1.06
NDUFB1-207ENST00000617122 COL18A1P39060 1754 aa21.69■■□□□ 1.06
NDUFB1-207ENST00000617122 CSB-PGBD3P0DP91 1061 aa21.68■■□□□ 1.06
NDUFB1-207ENST00000617122 TMF1P82094 1093 aa21.68■■□□□ 1.06
NDUFB1-207ENST00000617122 PDE3BQ13370 1112 aa21.68■■□□□ 1.06
NDUFB1-207ENST00000617122 TOM1L2Q6ZVM7 507 aa21.68■■□□□ 1.06
NDUFB1-207ENST00000617122 A0A1W2PP64 1363 aa21.68■■□□□ 1.06
NDUFB1-207ENST00000617122 BARGINQ6ZT62 677 aa21.67■■□□□ 1.06
NDUFB1-207ENST00000617122 PUS7Q96PZ0 661 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms