RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 CFAP43Q8NDM7 1665 aa16.99■□□□□ 0.31
TNFRSF11A-205ENST00000616710 RTF1Q92541 710 aaKnown RBP16.99■□□□□ 0.31
TNFRSF11A-205ENST00000616710 RIOK3O14730 519 aaKnown RBP16.98■□□□□ 0.31
TNFRSF11A-205ENST00000616710 TERF1P54274 439 aa16.98■□□□□ 0.31
TNFRSF11A-205ENST00000616710 PRG4Q92954 1404 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF11A-205ENST00000616710 GOLGA6L6A8MZA4 724 aa16.98■□□□□ 0.31
TNFRSF11A-205ENST00000616710 JPH4Q96JJ6 628 aa16.98■□□□□ 0.31
TNFRSF11A-205ENST00000616710 KIF20AO95235 890 aa16.98■□□□□ 0.31
TNFRSF11A-205ENST00000616710 ZNF445P59923 1031 aa16.98■□□□□ 0.31
TNFRSF11A-205ENST00000616710 RBM25P49756 843 aaKnown RBP16.97■□□□□ 0.31
TNFRSF11A-205ENST00000616710 TPD52L1Q16890 204 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF11A-205ENST00000616710 TSHZ3Q63HK5 1081 aa16.97■□□□□ 0.31
TNFRSF11A-205ENST00000616710 PLPPR3Q6T4P5 718 aa16.97■□□□□ 0.31
TNFRSF11A-205ENST00000616710 INTS3Q68E01 1043 aaKnown RBP16.97■□□□□ 0.31
TNFRSF11A-205ENST00000616710 STK26Q9P289 416 aa16.97■□□□□ 0.31
TNFRSF11A-205ENST00000616710 HS1BP3Q53T59 392 aa16.97■□□□□ 0.31
TNFRSF11A-205ENST00000616710 MCM5P33992 734 aa16.96■□□□□ 0.31
TNFRSF11A-205ENST00000616710 RALGAPBQ86X10 1494 aa16.96■□□□□ 0.31
TNFRSF11A-205ENST00000616710 GIMAP6Q6P9H5 292 aa16.96■□□□□ 0.31
TNFRSF11A-205ENST00000616710 PRIMPOLQ96LW4 560 aa16.96■□□□□ 0.31
TNFRSF11A-205ENST00000616710 VPS37CA5D8V6 355 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF11A-205ENST00000616710 MCCP23508 829 aa16.95■□□□□ 0.3
TNFRSF11A-205ENST00000616710 GGNBP2Q9H3C7 697 aa16.95■□□□□ 0.3
TNFRSF11A-205ENST00000616710 CCDC66A2RUB6 948 aa16.95■□□□□ 0.3
TNFRSF11A-205ENST00000616710 CAMK4Q16566 473 aa16.95■□□□□ 0.3
TNFRSF11A-205ENST00000616710 BMP2KLQ5H9B9 411 aa16.95■□□□□ 0.3
TNFRSF11A-205ENST00000616710 GORABQ5T7V8 394 aa16.95■□□□□ 0.3
TNFRSF11A-205ENST00000616710 CAMSAP2Q08AD1 1489 aa16.95■□□□□ 0.3
TNFRSF11A-205ENST00000616710 NUCB1Q02818 461 aa16.94■□□□□ 0.3
TNFRSF11A-205ENST00000616710 TRIM5Q9C035 493 aa16.94■□□□□ 0.3
TNFRSF11A-205ENST00000616710 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.94■□□□□ 0.3
TNFRSF11A-205ENST00000616710 HMOX1P09601 288 aa16.94■□□□□ 0.3
TNFRSF11A-205ENST00000616710 SRPK2P78362 688 aaKnown RBP16.94■□□□□ 0.3
TNFRSF11A-205ENST00000616710 CCDC112Q8NEF3 446 aa16.94■□□□□ 0.3
TNFRSF11A-205ENST00000616710 ROCK1Q13464 1354 aa16.94■□□□□ 0.3
TNFRSF11A-205ENST00000616710 PZPP20742 1482 aa16.93■□□□□ 0.3
TNFRSF11A-205ENST00000616710 REC8O95072 547 aa16.93■□□□□ 0.3
TNFRSF11A-205ENST00000616710 SKIDA1Q1XH10 827 aa16.93■□□□□ 0.3
TNFRSF11A-205ENST00000616710 GADD45BO75293 160 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF11A-205ENST00000616710 NAA30Q147X3 362 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF11A-205ENST00000616710 TRIM34Q9BYJ4 488 aa16.93■□□□□ 0.3
TNFRSF11A-205ENST00000616710 NINLQ9Y2I6 1382 aa16.93■□□□□ 0.3
TNFRSF11A-205ENST00000616710 SNAPC4Q5SXM2 1469 aa16.93■□□□□ 0.3
TNFRSF11A-205ENST00000616710 EPRSP07814 1512 aaKnown RBP16.92■□□□□ 0.3
TNFRSF11A-205ENST00000616710 HECW1Q76N89 1606 aa16.92■□□□□ 0.3
TNFRSF11A-205ENST00000616710 ZRSR1Q15695 479 aaKnown RBP16.92■□□□□ 0.3
TNFRSF11A-205ENST00000616710 TMX1Q9H3N1 280 aa16.92■□□□□ 0.3
TNFRSF11A-205ENST00000616710 WDR63Q8IWG1 891 aa16.92■□□□□ 0.3
TNFRSF11A-205ENST00000616710 TRMT2AQ8IZ69 625 aaKnown RBP16.92■□□□□ 0.3
TNFRSF11A-205ENST00000616710 TMEM132EQ6IEE7 984 aa16.92■□□□□ 0.3
TNFRSF11A-205ENST00000616710 SOX12O15370 315 aa16.91■□□□□ 0.3
TNFRSF11A-205ENST00000616710 GTF2F1P35269 517 aaKnown RBP eCLIP16.91■□□□□ 0.3
TNFRSF11A-205ENST00000616710 CWC22Q9HCG8 908 aaKnown RBP16.91■□□□□ 0.3
TNFRSF11A-205ENST00000616710 UGGT2Q9NYU1 1516 aa16.91■□□□□ 0.3
TNFRSF11A-205ENST00000616710 DDX54Q8TDD1 881 aaKnown RBP16.91■□□□□ 0.3
TNFRSF11A-205ENST00000616710 OTUD7AQ8TE49 926 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF11A-205ENST00000616710 UTP14CQ5TAP6 766 aaKnown RBP16.91■□□□□ 0.3
TNFRSF11A-205ENST00000616710 TRMT1Q9NXH9 659 aaKnown RBP16.91■□□□□ 0.3
TNFRSF11A-205ENST00000616710 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
TNFRSF11A-205ENST00000616710 POLR3GO15318 223 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF11A-205ENST00000616710 HDAC1Q13547 482 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF11A-205ENST00000616710 GPRASP1Q5JY77 1395 aa16.9■□□□□ 0.3
TNFRSF11A-205ENST00000616710 TNNT1P13805 278 aa16.89■□□□□ 0.29
TNFRSF11A-205ENST00000616710 ZNF710Q8N1W2 664 aa16.89■□□□□ 0.29
TNFRSF11A-205ENST00000616710 PIBF1Q8WXW3 757 aa16.89■□□□□ 0.29
TNFRSF11A-205ENST00000616710 CARD14Q9BXL6 1004 aa16.89■□□□□ 0.29
TNFRSF11A-205ENST00000616710 NGEFQ8N5V2 710 aa16.89■□□□□ 0.29
TNFRSF11A-205ENST00000616710 HMGXB3Q12766 1538 aa16.89■□□□□ 0.29
TNFRSF11A-205ENST00000616710 ERCC6Q03468 1493 aa16.88■□□□□ 0.29
TNFRSF11A-205ENST00000616710 ATAD2Q6PL18 1390 aa16.88■□□□□ 0.29
TNFRSF11A-205ENST00000616710 USP48Q86UV5 1035 aa16.88■□□□□ 0.29
TNFRSF11A-205ENST00000616710 FERMT3Q86UX7 667 aa16.88■□□□□ 0.29
TNFRSF11A-205ENST00000616710 CKAP2LQ8IYA6 745 aa16.88■□□□□ 0.29
TNFRSF11A-205ENST00000616710 CCAR2Q8N163 923 aaKnown RBP16.88■□□□□ 0.29
TNFRSF11A-205ENST00000616710 TMX3Q96JJ7 454 aa16.88■□□□□ 0.29
TNFRSF11A-205ENST00000616710 MAGI3Q5TCQ9 1506 aa16.87■□□□□ 0.29
TNFRSF11A-205ENST00000616710 FILIP1Q7Z7B0 1213 aa16.87■□□□□ 0.29
TNFRSF11A-205ENST00000616710 PTGS1P23219 599 aa16.87■□□□□ 0.29
TNFRSF11A-205ENST00000616710 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.87■□□□□ 0.29
TNFRSF11A-205ENST00000616710 GCC1Q96CN9 775 aa16.87■□□□□ 0.29
TNFRSF11A-205ENST00000616710 KDM5CP41229 1560 aa16.87■□□□□ 0.29
TNFRSF11A-205ENST00000616710 MAP4K4O95819 1239 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF11A-205ENST00000616710 TIGD1Q96MW7 591 aa16.87■□□□□ 0.29
TNFRSF11A-205ENST00000616710 ZBTB40Q9NUA8 1239 aa16.87■□□□□ 0.29
TNFRSF11A-205ENST00000616710 CNPY2Q9Y2B0 182 aa16.86■□□□□ 0.29
TNFRSF11A-205ENST00000616710 PYCARDQ9ULZ3 195 aa16.86■□□□□ 0.29
TNFRSF11A-205ENST00000616710 KIAA0586Q9BVV6 1533 aa16.86■□□□□ 0.29
TNFRSF11A-205ENST00000616710 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
TNFRSF11A-205ENST00000616710 FBLN1P23142 703 aa16.85■□□□□ 0.29
TNFRSF11A-205ENST00000616710 FOSBP53539 338 aa16.85■□□□□ 0.29
TNFRSF11A-205ENST00000616710 CCDC186Q7Z3E2 898 aa16.85■□□□□ 0.29
TNFRSF11A-205ENST00000616710 SYTL4Q96C24 671 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF11A-205ENST00000616710 PDLIM2Q96JY6 352 aa16.85■□□□□ 0.29
TNFRSF11A-205ENST00000616710 KIF2CQ99661 725 aa16.85■□□□□ 0.29
TNFRSF11A-205ENST00000616710 TMPOP42166 694 aaKnown RBP16.85■□□□□ 0.29
TNFRSF11A-205ENST00000616710 GNL2Q13823 731 aaKnown RBP16.85■□□□□ 0.29
TNFRSF11A-205ENST00000616710 GRIN2BQ13224 1484 aa16.84■□□□□ 0.29
TNFRSF11A-205ENST00000616710 TAF3Q5VWG9 929 aa16.84■□□□□ 0.29
TNFRSF11A-205ENST00000616710 NECTIN2Q92692 538 aa16.84■□□□□ 0.29
TNFRSF11A-205ENST00000616710 CC2D2AQ9P2K1 1620 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms