RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 AMOTL2Q9Y2J4 779 aa16.37■□□□□ 0.21
PPP4R3B-206ENST00000616407 POLR3AO14802 1390 aaPredicted RBP16.37■□□□□ 0.21
PPP4R3B-206ENST00000616407 ADCY10Q96PN6 1610 aa16.37■□□□□ 0.21
PPP4R3B-206ENST00000616407 C22orf23Q9BZE7 217 aa16.36■□□□□ 0.21
PPP4R3B-206ENST00000616407 ABCC1P33527 1531 aa16.36■□□□□ 0.21
PPP4R3B-206ENST00000616407 RILPL2Q969X0 211 aa16.36■□□□□ 0.21
PPP4R3B-206ENST00000616407 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
PPP4R3B-206ENST00000616407 GBP4Q96PP9 640 aa16.36■□□□□ 0.21
PPP4R3B-206ENST00000616407 CFAP65Q6ZU64 1925 aaKnown RBP16.35■□□□□ 0.21
PPP4R3B-206ENST00000616407 PUS7Q96PZ0 661 aaKnown RBP16.35■□□□□ 0.21
PPP4R3B-206ENST00000616407 HDAC5Q9UQL6 1122 aa16.35■□□□□ 0.21
PPP4R3B-206ENST00000616407 SLC4A2P04920 1241 aa16.35■□□□□ 0.21
PPP4R3B-206ENST00000616407 NPATQ14207 1427 aa16.34■□□□□ 0.21
PPP4R3B-206ENST00000616407 FGD1P98174 961 aa16.34■□□□□ 0.21
PPP4R3B-206ENST00000616407 ANKLE2Q86XL3 938 aa16.34■□□□□ 0.21
PPP4R3B-206ENST00000616407 ZCCHC11Q5TAX3 1644 aaKnown RBP16.34■□□□□ 0.21
PPP4R3B-206ENST00000616407 ABCC11Q96J66 1382 aa16.33■□□□□ 0.21
PPP4R3B-206ENST00000616407 NPC1L1Q9UHC9 1359 aa16.33■□□□□ 0.2
PPP4R3B-206ENST00000616407 KDM5DQ9BY66 1539 aa16.33■□□□□ 0.2
PPP4R3B-206ENST00000616407 NOL8Q76FK4 1167 aaKnown RBP16.33■□□□□ 0.2
PPP4R3B-206ENST00000616407 MCM10Q7L590 875 aa16.33■□□□□ 0.2
PPP4R3B-206ENST00000616407 ZNF428Q96B54 188 aa16.32■□□□□ 0.2
PPP4R3B-206ENST00000616407 PROSER2Q86WR7 435 aaPredicted RBP16.32■□□□□ 0.2
PPP4R3B-206ENST00000616407 TNRQ92752 1358 aa16.32■□□□□ 0.2
PPP4R3B-206ENST00000616407 RIMS2Q9UQ26 1411 aa16.32■□□□□ 0.2
PPP4R3B-206ENST00000616407 RBM33Q96EV2 1170 aaKnown RBP16.31■□□□□ 0.2
PPP4R3B-206ENST00000616407 CHMP3Q9Y3E7 222 aa16.31■□□□□ 0.2
PPP4R3B-206ENST00000616407 IGHDP01880 384 aa16.31■□□□□ 0.2
PPP4R3B-206ENST00000616407 MIS18AQ9NYP9 233 aa16.31■□□□□ 0.2
PPP4R3B-206ENST00000616407 TRIM27P14373 513 aa16.31■□□□□ 0.2
PPP4R3B-206ENST00000616407 C9orf78Q9NZ63 289 aaPredicted RBP16.31■□□□□ 0.2
PPP4R3B-206ENST00000616407 A0A1W2PP64 1363 aa16.31■□□□□ 0.2
PPP4R3B-206ENST00000616407 ATF3P18847 181 aa16.31■□□□□ 0.2
PPP4R3B-206ENST00000616407 ZRANB1Q9UGI0 708 aa16.31■□□□□ 0.2
PPP4R3B-206ENST00000616407 L1TD1Q5T7N2 865 aaKnown RBP16.3■□□□□ 0.2
PPP4R3B-206ENST00000616407 NLRP2Q9NX02 1062 aa16.3■□□□□ 0.2
PPP4R3B-206ENST00000616407 NFKBIBQ15653 356 aa16.3■□□□□ 0.2
PPP4R3B-206ENST00000616407 MAGI2Q86UL8 1455 aa16.3■□□□□ 0.2
PPP4R3B-206ENST00000616407 ST18O60284 1047 aa16.29■□□□□ 0.2
PPP4R3B-206ENST00000616407 CCDC30Q5VVM6 783 aa16.29■□□□□ 0.2
PPP4R3B-206ENST00000616407 GCC1Q96CN9 775 aa16.29■□□□□ 0.2
PPP4R3B-206ENST00000616407 ACEP12821 1306 aa16.29■□□□□ 0.2
PPP4R3B-206ENST00000616407 UGGT1Q9NYU2 1555 aa16.29■□□□□ 0.2
PPP4R3B-206ENST00000616407 RAPGEF4Q8WZA2 1011 aa16.29■□□□□ 0.2
PPP4R3B-206ENST00000616407 POLKQ9UBT6 870 aa16.29■□□□□ 0.2
PPP4R3B-206ENST00000616407 RNF123Q5XPI4 1314 aa16.29■□□□□ 0.2
PPP4R3B-206ENST00000616407 GPATCH3Q96I76 525 aa16.29■□□□□ 0.2
PPP4R3B-206ENST00000616407 IFT57Q9NWB7 429 aa16.29■□□□□ 0.2
PPP4R3B-206ENST00000616407 NAP1L2Q9ULW6 460 aaPredicted RBP16.29■□□□□ 0.2
PPP4R3B-206ENST00000616407 XPCQ01831 940 aaPredicted RBP16.28■□□□□ 0.2
PPP4R3B-206ENST00000616407 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
PPP4R3B-206ENST00000616407 YTHDC2Q9H6S0 1430 aaKnown RBP16.28■□□□□ 0.2
PPP4R3B-206ENST00000616407 NCKAP5LQ9HCH0 1330 aa16.28■□□□□ 0.2
PPP4R3B-206ENST00000616407 FAM83GA6ND36 823 aa16.27■□□□□ 0.2
PPP4R3B-206ENST00000616407 GSE1Q14687 1217 aa16.27■□□□□ 0.2
PPP4R3B-206ENST00000616407 ALDH1L2Q3SY69 923 aa16.27■□□□□ 0.2
PPP4R3B-206ENST00000616407 CCDC27Q2M243 656 aa16.27■□□□□ 0.2
PPP4R3B-206ENST00000616407 PTPRTO14522 1441 aa16.27■□□□□ 0.19
PPP4R3B-206ENST00000616407 TNNQ9UQP3 1299 aa16.26■□□□□ 0.19
PPP4R3B-206ENST00000616407 YEATS2Q9ULM3 1422 aa16.26■□□□□ 0.19
PPP4R3B-206ENST00000616407 CHD1LQ86WJ1 897 aa16.26■□□□□ 0.19
PPP4R3B-206ENST00000616407 TTC5Q8N0Z6 440 aa16.26■□□□□ 0.19
PPP4R3B-206ENST00000616407 REC8O95072 547 aa16.26■□□□□ 0.19
PPP4R3B-206ENST00000616407 UBTFL1P0CB47 393 aaPredicted RBP16.26■□□□□ 0.19
PPP4R3B-206ENST00000616407 TAOK2Q9UL54 1235 aa16.26■□□□□ 0.19
PPP4R3B-206ENST00000616407 NEO1Q92859 1461 aa16.26■□□□□ 0.19
PPP4R3B-206ENST00000616407 ZMYM3Q14202 1370 aa16.25■□□□□ 0.19
PPP4R3B-206ENST00000616407 HDGFL1Q5TGJ6 251 aa16.25■□□□□ 0.19
PPP4R3B-206ENST00000616407 TRPM2O94759 1503 aa16.25■□□□□ 0.19
PPP4R3B-206ENST00000616407 CDC45O75419 566 aa16.25■□□□□ 0.19
PPP4R3B-206ENST00000616407 GNAI3P08754 354 aa16.25■□□□□ 0.19
PPP4R3B-206ENST00000616407 NEXNQ0ZGT2 675 aa16.24■□□□□ 0.19
PPP4R3B-206ENST00000616407 AIMP1Q12904 312 aaKnown RBP16.24■□□□□ 0.19
PPP4R3B-206ENST00000616407 PLEKHO1Q53GL0 409 aaPredicted RBP16.24■□□□□ 0.19
PPP4R3B-206ENST00000616407 PCDHB15Q9Y5E8 787 aa16.24■□□□□ 0.19
PPP4R3B-206ENST00000616407 PPIP5K1Q6PFW1 1433 aa16.24■□□□□ 0.19
PPP4R3B-206ENST00000616407 INTS3Q68E01 1043 aaKnown RBP16.24■□□□□ 0.19
PPP4R3B-206ENST00000616407 HSP90AB2PQ58FF8 381 aa16.24■□□□□ 0.19
PPP4R3B-206ENST00000616407 CHMP5Q9NZZ3 219 aa16.24■□□□□ 0.19
PPP4R3B-206ENST00000616407 IL16Q14005 1332 aa16.23■□□□□ 0.19
PPP4R3B-206ENST00000616407 FOXD4L5Q5VV16 416 aaPredicted RBP16.23■□□□□ 0.19
PPP4R3B-206ENST00000616407 FOXD4L4Q8WXT5 416 aaPredicted RBP16.23■□□□□ 0.19
PPP4R3B-206ENST00000616407 PTMAP06454 111 aaKnown RBP16.23■□□□□ 0.19
PPP4R3B-206ENST00000616407 ZNF530Q6P9A1 599 aaPredicted RBP16.23■□□□□ 0.19
PPP4R3B-206ENST00000616407 BLMP54132 1417 aaPredicted RBP16.23■□□□□ 0.19
PPP4R3B-206ENST00000616407 MBIPQ9NS73 344 aa16.23■□□□□ 0.19
PPP4R3B-206ENST00000616407 CDC42BPBQ9Y5S2 1711 aa16.23■□□□□ 0.19
PPP4R3B-206ENST00000616407 ZFYVE16Q7Z3T8 1539 aa16.22■□□□□ 0.19
PPP4R3B-206ENST00000616407 TTC21BQ7Z4L5 1316 aa16.22■□□□□ 0.19
PPP4R3B-206ENST00000616407 DDX58O95786 925 aaKnown RBP16.22■□□□□ 0.19
PPP4R3B-206ENST00000616407 RLBP1P12271 317 aa16.22■□□□□ 0.19
PPP4R3B-206ENST00000616407 ANO2Q9NQ90 1003 aa16.22■□□□□ 0.19
PPP4R3B-206ENST00000616407 EVA1CP58658 441 aa16.22■□□□□ 0.19
PPP4R3B-206ENST00000616407 BCORL1Q5H9F3 1711 aa16.22■□□□□ 0.19
PPP4R3B-206ENST00000616407 GOLGA6L3A6NEY3 463 aa16.22■□□□□ 0.19
PPP4R3B-206ENST00000616407 GNAI2P04899 355 aa16.22■□□□□ 0.19
PPP4R3B-206ENST00000616407 PLXNC1O60486 1568 aa16.21■□□□□ 0.19
PPP4R3B-206ENST00000616407 PLCB2Q00722 1185 aa16.21■□□□□ 0.19
PPP4R3B-206ENST00000616407 CCDC9Q9Y3X0 531 aaKnown RBP16.21■□□□□ 0.19
PPP4R3B-206ENST00000616407 PHACTR3Q96KR7 559 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms