RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 CARD11Q9BXL7 1154 aa6.98□□□□□ -1.29
SYCP1-209ENST00000613524 PTPRTO14522 1441 aa6.97□□□□□ -1.29
SYCP1-209ENST00000613524 KIF1BO60333 1816 aa6.97□□□□□ -1.29
SYCP1-209ENST00000613524 POLR1AO95602 1720 aaPredicted RBP6.97□□□□□ -1.29
SYCP1-209ENST00000613524 FAM212AQ96EL1 285 aa6.97□□□□□ -1.29
SYCP1-209ENST00000613524 CABP2Q9NPB3 220 aa6.97□□□□□ -1.29
SYCP1-209ENST00000613524 ZBTB47Q9UFB7 747 aaPredicted RBP6.97□□□□□ -1.29
SYCP1-209ENST00000613524 ZFYVE9O95405 1425 aa6.97□□□□□ -1.29
SYCP1-209ENST00000613524 ADAMTS13Q76LX8 1427 aa6.97□□□□□ -1.29
SYCP1-209ENST00000613524 TRPM2O94759 1503 aa6.97□□□□□ -1.29
SYCP1-209ENST00000613524 A0A0G2JS52 829 aa6.96□□□□□ -1.29
SYCP1-209ENST00000613524 MYT1Q01538 1121 aa6.96□□□□□ -1.29
SYCP1-209ENST00000613524 C19orf44Q9H6X5 657 aa6.96□□□□□ -1.29
SYCP1-209ENST00000613524 ZNF142P52746 1687 aaPredicted RBP6.96□□□□□ -1.3
SYCP1-209ENST00000613524 PELP1Q8IZL8 1130 aaKnown RBP6.96□□□□□ -1.3
SYCP1-209ENST00000613524 LRRC7Q96NW7 1537 aa6.96□□□□□ -1.3
SYCP1-209ENST00000613524 EP400Q96L91 3159 aa6.95□□□□□ -1.3
SYCP1-209ENST00000613524 IGSF3O75054 1194 aa6.95□□□□□ -1.3
SYCP1-209ENST00000613524 NGDNQ8NEJ9 315 aaKnown RBP6.95□□□□□ -1.3
SYCP1-209ENST00000613524 ROCK2O75116 1388 aaKnown RBP6.95□□□□□ -1.3
SYCP1-209ENST00000613524 STRCP1A6NGW2 1772 aa6.95□□□□□ -1.3
SYCP1-209ENST00000613524 FOXD4L5Q5VV16 416 aaPredicted RBP6.95□□□□□ -1.3
SYCP1-209ENST00000613524 KRI1Q8N9T8 703 aaKnown RBP6.95□□□□□ -1.3
SYCP1-209ENST00000613524 FOXD4L4Q8WXT5 416 aaPredicted RBP6.95□□□□□ -1.3
SYCP1-209ENST00000613524 C8orf37Q96NL8 207 aa6.95□□□□□ -1.3
SYCP1-209ENST00000613524 TSPYL2Q9H2G4 693 aaPredicted RBP6.95□□□□□ -1.3
SYCP1-209ENST00000613524 CCDC9Q9Y3X0 531 aaKnown RBP6.95□□□□□ -1.3
SYCP1-209ENST00000613524 ARHGAP23Q9P227 1491 aa6.94□□□□□ -1.3
SYCP1-209ENST00000613524 SLIT1O75093 1534 aa6.94□□□□□ -1.3
SYCP1-209ENST00000613524 PSME1Q06323 249 aa6.94□□□□□ -1.3
SYCP1-209ENST00000613524 BRINP3Q76B58 766 aa6.94□□□□□ -1.3
SYCP1-209ENST00000613524 AEBP1Q8IUX7 1158 aa6.94□□□□□ -1.3
SYCP1-209ENST00000613524 USP35Q9P2H5 1018 aa6.94□□□□□ -1.3
SYCP1-209ENST00000613524 SPATA31E1Q6ZUB1 1445 aa6.94□□□□□ -1.3
SYCP1-209ENST00000613524 NEXMIFQ5QGS0 1516 aa6.94□□□□□ -1.3
SYCP1-209ENST00000613524 LTBP4Q8N2S1 1624 aa6.93□□□□□ -1.3
SYCP1-209ENST00000613524 C14orf93Q9H972 538 aaKnown RBP6.93□□□□□ -1.3
SYCP1-209ENST00000613524 ZBTB12Q9Y330 459 aaPredicted RBP6.93□□□□□ -1.3
SYCP1-209ENST00000613524 PLEKHG3A1L390 1219 aa6.93□□□□□ -1.3
SYCP1-209ENST00000613524 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.93□□□□□ -1.3
SYCP1-209ENST00000613524 LARP6Q9BRS8 491 aaKnown RBP6.93□□□□□ -1.3
SYCP1-209ENST00000613524 CREBZFQ9NS37 354 aa6.93□□□□□ -1.3
SYCP1-209ENST00000613524 RPGRIP1LQ68CZ1 1315 aa6.93□□□□□ -1.3
SYCP1-209ENST00000613524 PDE4DQ08499 809 aa6.92□□□□□ -1.3
SYCP1-209ENST00000613524 BARGINQ6ZT62 677 aa6.92□□□□□ -1.3
SYCP1-209ENST00000613524 ARHGEF1Q92888 912 aaKnown RBP6.92□□□□□ -1.3
SYCP1-209ENST00000613524 ACIN1Q9UKV3 1341 aaKnown RBP6.92□□□□□ -1.3
SYCP1-209ENST00000613524 ZNF316A6NFI3 1004 aaPredicted RBP6.92□□□□□ -1.3
SYCP1-209ENST00000613524 CDK19Q9BWU1 502 aa6.92□□□□□ -1.3
SYCP1-209ENST00000613524 YTHDC2Q9H6S0 1430 aaKnown RBP6.92□□□□□ -1.3
SYCP1-209ENST00000613524 ALKQ9UM73 1620 aa6.92□□□□□ -1.3
SYCP1-209ENST00000613524 ST20-MTHFSA0A0A6YYL1 179 aa6.91□□□□□ -1.3
SYCP1-209ENST00000613524 PHF8Q9UPP1 1060 aa6.91□□□□□ -1.3
SYCP1-209ENST00000613524 TNNT2P45379 298 aaPredicted RBP6.91□□□□□ -1.3
SYCP1-209ENST00000613524 MED14O60244 1454 aa6.91□□□□□ -1.3
SYCP1-209ENST00000613524 GOLGB1Q14789 3259 aaKnown RBP6.91□□□□□ -1.3
SYCP1-209ENST00000613524 TRIM66O15016 1216 aa6.9□□□□□ -1.3
SYCP1-209ENST00000613524 PDIA4P13667 645 aaKnown RBP6.9□□□□□ -1.3
SYCP1-209ENST00000613524 ZC3H6P61129 1189 aaKnown RBP6.9□□□□□ -1.3
SYCP1-209ENST00000613524 POM121Q96HA1 1249 aa6.9□□□□□ -1.3
SYCP1-209ENST00000613524 NGLY1Q96IV0 654 aa6.9□□□□□ -1.3
SYCP1-209ENST00000613524 CHRNA2Q15822 529 aa6.9□□□□□ -1.3
SYCP1-209ENST00000613524 ILDR2Q71H61 639 aa6.9□□□□□ -1.3
SYCP1-209ENST00000613524 CARNS1A5YM72 827 aa6.9□□□□□ -1.31
SYCP1-209ENST00000613524 KCTD17Q8N5Z5 321 aa6.9□□□□□ -1.31
SYCP1-209ENST00000613524 CABP1Q9NZU7 370 aa6.9□□□□□ -1.31
SYCP1-209ENST00000613524 CENPJQ9HC77 1338 aaPredicted RBP6.89□□□□□ -1.31
SYCP1-209ENST00000613524 FBLN1P23142 703 aa6.89□□□□□ -1.31
SYCP1-209ENST00000613524 KRT28Q7Z3Y7 464 aa6.89□□□□□ -1.31
SYCP1-209ENST00000613524 PLSCR2Q9NRY7 297 aa6.89□□□□□ -1.31
SYCP1-209ENST00000613524 FECHP22830 423 aa6.89□□□□□ -1.31
SYCP1-209ENST00000613524 DIEXFQ68CQ4 756 aaKnown RBP6.89□□□□□ -1.31
SYCP1-209ENST00000613524 EFCAB3Q8N7B9 438 aa6.89□□□□□ -1.31
SYCP1-209ENST00000613524 NUDT16Q96DE0 195 aaKnown RBP6.89□□□□□ -1.31
SYCP1-209ENST00000613524 STRN4Q9NRL3 753 aa6.89□□□□□ -1.31
SYCP1-209ENST00000613524 PIK3C2GO75747 1445 aa6.89□□□□□ -1.31
SYCP1-209ENST00000613524 PPM1GO15355 546 aaPredicted RBP6.88□□□□□ -1.31
SYCP1-209ENST00000613524 CHADLQ6NUI6 762 aa6.88□□□□□ -1.31
SYCP1-209ENST00000613524 CPS1P31327 1500 aa6.88□□□□□ -1.31
SYCP1-209ENST00000613524 WASLO00401 505 aaPredicted RBP6.87□□□□□ -1.31
SYCP1-209ENST00000613524 GPIHBP1Q8IV16 184 aa6.87□□□□□ -1.31
SYCP1-209ENST00000613524 SLC12A5Q9H2X9 1139 aa6.87□□□□□ -1.31
SYCP1-209ENST00000613524 ZRANB1Q9UGI0 708 aa6.87□□□□□ -1.31
SYCP1-209ENST00000613524 NRXN3Q9Y4C0 1643 aa6.87□□□□□ -1.31
SYCP1-209ENST00000613524 LRPPRCP42704 1394 aaKnown RBP6.87□□□□□ -1.31
SYCP1-209ENST00000613524 PRR36Q9H6K5 1346 aa6.87□□□□□ -1.31
SYCP1-209ENST00000613524 FAM182BQ5T319 152 aa6.87□□□□□ -1.31
SYCP1-209ENST00000613524 ABTB2Q8N961 1025 aa6.87□□□□□ -1.31
SYCP1-209ENST00000613524 LTV1Q96GA3 475 aaPredicted RBP6.87□□□□□ -1.31
SYCP1-209ENST00000613524 MTMR7Q9Y216 660 aa6.87□□□□□ -1.31
SYCP1-209ENST00000613524 PPLO60437 1756 aa6.87□□□□□ -1.31
SYCP1-209ENST00000613524 RAD21O60216 631 aa6.87□□□□□ -1.31
SYCP1-209ENST00000613524 UTRNP46939 3433 aa6.86□□□□□ -1.31
SYCP1-209ENST00000613524 PRAG1Q86YV5 1406 aa6.86□□□□□ -1.31
SYCP1-209ENST00000613524 AK7Q96M32 723 aa6.86□□□□□ -1.31
SYCP1-209ENST00000613524 ROBO1Q9Y6N7 1651 aa6.86□□□□□ -1.31
SYCP1-209ENST00000613524 ASXL1Q8IXJ9 1541 aa6.85□□□□□ -1.31
SYCP1-209ENST00000613524 ADGRL3Q9HAR2 1447 aa6.85□□□□□ -1.31
SYCP1-209ENST00000613524 CHD2O14647 1828 aaKnown RBP6.85□□□□□ -1.31
SYCP1-209ENST00000613524 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms