RNA–Protein interactions for RNA: ENST00000613121.1

IGHV3-41-201, Transcript of immunoglobulin heavy variable 3-41 (pseudogene), humanhuman

BASIC

Gene IGHV3-41, Length 348 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-41-201ENST00000613121 FNBP4Q8N3X1 1017 aaPredicted RBP25.39■■□□□ 1.66
IGHV3-41-201ENST00000613121 ATAD2Q6PL18 1390 aa25.39■■□□□ 1.65
IGHV3-41-201ENST00000613121 SBNO2Q9Y2G9 1366 aa25.39■■□□□ 1.65
IGHV3-41-201ENST00000613121 ZNF692Q9BU19 519 aaPredicted RBP25.38■■□□□ 1.65
IGHV3-41-201ENST00000613121 TRPC5Q9UL62 973 aaPredicted RBP25.36■■□□□ 1.65
IGHV3-41-201ENST00000613121 USP47Q96K76 1375 aa25.35■■□□□ 1.65
IGHV3-41-201ENST00000613121 COL22A1Q8NFW1 1626 aaPredicted RBP25.35■■□□□ 1.65
IGHV3-41-201ENST00000613121 TESK2Q96S53 571 aa25.35■■□□□ 1.65
IGHV3-41-201ENST00000613121 TMF1P82094 1093 aa25.34■■□□□ 1.65
IGHV3-41-201ENST00000613121 NLRP13Q86W25 1043 aa25.33■■□□□ 1.65
IGHV3-41-201ENST00000613121 FAM83GA6ND36 823 aa25.32■■□□□ 1.64
IGHV3-41-201ENST00000613121 RBM6P78332 1123 aaKnown RBP25.32■■□□□ 1.64
IGHV3-41-201ENST00000613121 PUS7Q96PZ0 661 aaKnown RBP25.32■■□□□ 1.64
IGHV3-41-201ENST00000613121 ITSN1Q15811 1721 aa25.32■■□□□ 1.64
IGHV3-41-201ENST00000613121 UNC5CLQ8IV45 518 aa25.31■■□□□ 1.64
IGHV3-41-201ENST00000613121 SLC12A5Q9H2X9 1139 aa25.31■■□□□ 1.64
IGHV3-41-201ENST00000613121 NLRP6P59044 892 aa25.3■■□□□ 1.64
IGHV3-41-201ENST00000613121 HDGFL2Q7Z4V5 671 aaPredicted RBP25.3■■□□□ 1.64
IGHV3-41-201ENST00000613121 BRD4O60885 1362 aaPredicted RBP25.3■■□□□ 1.64
IGHV3-41-201ENST00000613121 ZC3H6P61129 1189 aaKnown RBP25.28■■□□□ 1.64
IGHV3-41-201ENST00000613121 PRDM11Q9NQV5 511 aa25.28■■□□□ 1.64
IGHV3-41-201ENST00000613121 USP6P35125 1406 aa25.28■■□□□ 1.64
IGHV3-41-201ENST00000613121 TERF2IPQ9NYB0 399 aa25.27■■□□□ 1.64
IGHV3-41-201ENST00000613121 KTN1Q86UP2 1357 aaKnown RBP25.27■■□□□ 1.64
IGHV3-41-201ENST00000613121 CDCA8Q53HL2 280 aa25.26■■□□□ 1.63
IGHV3-41-201ENST00000613121 CCDC9Q9Y3X0 531 aaKnown RBP25.26■■□□□ 1.63
IGHV3-41-201ENST00000613121 TTC21BQ7Z4L5 1316 aa25.26■■□□□ 1.63
IGHV3-41-201ENST00000613121 BTG4Q9NY30 223 aa25.25■■□□□ 1.63
IGHV3-41-201ENST00000613121 TOPAZ1Q8N9V7 1692 aa25.25■■□□□ 1.63
IGHV3-41-201ENST00000613121 TRPM3Q9HCF6 1732 aaPredicted RBP25.25■■□□□ 1.63
IGHV3-41-201ENST00000613121 BCL9LQ86UU0 1499 aa25.24■■□□□ 1.63
IGHV3-41-201ENST00000613121 EIF4G2P78344 907 aaKnown RBP eCLIP25.24■■□□□ 1.63
IGHV3-41-201ENST00000613121 GJD4Q96KN9 370 aaPredicted RBP25.24■■□□□ 1.63
IGHV3-41-201ENST00000613121 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.23■■□□□ 1.63
IGHV3-41-201ENST00000613121 ZBTB7CA1YPR0 619 aa25.22■■□□□ 1.63
IGHV3-41-201ENST00000613121 GCP02774 474 aa25.22■■□□□ 1.63
IGHV3-41-201ENST00000613121 CHRNA2Q15822 529 aa25.22■■□□□ 1.63
IGHV3-41-201ENST00000613121 TTC21AQ8NDW8 1320 aa25.21■■□□□ 1.63
IGHV3-41-201ENST00000613121 CPSF1Q10570 1443 aaKnown RBP25.2■■□□□ 1.63
IGHV3-41-201ENST00000613121 KIAA0232Q92628 1395 aa25.19■■□□□ 1.62
IGHV3-41-201ENST00000613121 SLIT2O94813 1529 aa25.19■■□□□ 1.62
IGHV3-41-201ENST00000613121 POLR3GLQ9BT43 218 aa25.19■■□□□ 1.62
IGHV3-41-201ENST00000613121 ALS2Q96Q42 1657 aa25.19■■□□□ 1.62
IGHV3-41-201ENST00000613121 ATRNO75882 1429 aa25.19■■□□□ 1.62
IGHV3-41-201ENST00000613121 EVA1CP58658 441 aa25.18■■□□□ 1.62
IGHV3-41-201ENST00000613121 VPS72Q15906 364 aa25.18■■□□□ 1.62
IGHV3-41-201ENST00000613121 SSH2Q76I76 1423 aa25.18■■□□□ 1.62
IGHV3-41-201ENST00000613121 USP19O94966 1318 aa25.17■■□□□ 1.62
IGHV3-41-201ENST00000613121 SOX12O15370 315 aa25.17■■□□□ 1.62
IGHV3-41-201ENST00000613121 HSPA5P11021 654 aaKnown RBP25.17■■□□□ 1.62
IGHV3-41-201ENST00000613121 STRN4Q9NRL3 753 aa25.16■■□□□ 1.62
IGHV3-41-201ENST00000613121 KCNH5Q8NCM2 988 aa25.15■■□□□ 1.62
IGHV3-41-201ENST00000613121 NINLQ9Y2I6 1382 aa25.15■■□□□ 1.62
IGHV3-41-201ENST00000613121 NME9Q86XW9 330 aa25.14■■□□□ 1.62
IGHV3-41-201ENST00000613121 ZRANB1Q9UGI0 708 aa25.13■■□□□ 1.61
IGHV3-41-201ENST00000613121 A0A1W2PP64 1363 aa25.13■■□□□ 1.61
IGHV3-41-201ENST00000613121 CDK12Q9NYV4 1490 aaPredicted RBP25.11■■□□□ 1.61
IGHV3-41-201ENST00000613121 A0A0G2JS52 829 aa25.11■■□□□ 1.61
IGHV3-41-201ENST00000613121 MYT1Q01538 1121 aa25.11■■□□□ 1.61
IGHV3-41-201ENST00000613121 CD163L1Q9NR16 1453 aa25.1■■□□□ 1.61
IGHV3-41-201ENST00000613121 RGS12O14924 1447 aa25.09■■□□□ 1.61
IGHV3-41-201ENST00000613121 CPDO75976 1380 aa25.08■■□□□ 1.61
IGHV3-41-201ENST00000613121 EDC4Q6P2E9 1401 aaKnown RBP25.08■■□□□ 1.61
IGHV3-41-201ENST00000613121 MARF1Q9Y4F3 1742 aaKnown RBP25.08■■□□□ 1.61
IGHV3-41-201ENST00000613121 FAM98CQ17RN3 349 aaKnown RBP25.06■■□□□ 1.6
IGHV3-41-201ENST00000613121 SEPT12Q8IYM1 358 aa25.06■■□□□ 1.6
IGHV3-41-201ENST00000613121 USP35Q9P2H5 1018 aa25.06■■□□□ 1.6
IGHV3-41-201ENST00000613121 ANKRD36BQ8N2N9 1353 aa25.05■■□□□ 1.6
IGHV3-41-201ENST00000613121 USP31Q70CQ4 1352 aa25.05■■□□□ 1.6
IGHV3-41-201ENST00000613121 ABCA3Q99758 1704 aa25.04■■□□□ 1.6
IGHV3-41-201ENST00000613121 ARHGEF25Q86VW2 580 aa25.04■■□□□ 1.6
IGHV3-41-201ENST00000613121 COG3Q96JB2 828 aa25.04■■□□□ 1.6
IGHV3-41-201ENST00000613121 COL14A1Q05707 1796 aaKnown RBP25.03■■□□□ 1.6
IGHV3-41-201ENST00000613121 SPATA31A5Q5VU36 1347 aa25.03■■□□□ 1.6
IGHV3-41-201ENST00000613121 SPATA31A7Q8IWB4 1347 aa25.03■■□□□ 1.6
IGHV3-41-201ENST00000613121 ONECUT3O60422 494 aaPredicted RBP25.02■■□□□ 1.6
IGHV3-41-201ENST00000613121 LARP1Q6PKG0 1096 aaKnown RBP25.02■■□□□ 1.6
IGHV3-41-201ENST00000613121 UPF1Q92900 1129 aaKnown RBP eCLIP25.01■■□□□ 1.59
IGHV3-41-201ENST00000613121 AATKQ6ZMQ8 1374 aa25.01■■□□□ 1.59
IGHV3-41-201ENST00000613121 PHRF1Q9P1Y6 1649 aaKnown RBP25■■□□□ 1.59
IGHV3-41-201ENST00000613121 SLIT3O75094 1523 aa24.99■■□□□ 1.59
IGHV3-41-201ENST00000613121 AKAP12Q02952 1782 aa24.99■■□□□ 1.59
IGHV3-41-201ENST00000613121 SPATA31A1Q5TZJ5 1347 aa24.99■■□□□ 1.59
IGHV3-41-201ENST00000613121 NRKQ7Z2Y5 1582 aa24.99■■□□□ 1.59
IGHV3-41-201ENST00000613121 GGNBP2Q9H3C7 697 aa24.99■■□□□ 1.59
IGHV3-41-201ENST00000613121 AXIN2Q9Y2T1 843 aa24.99■■□□□ 1.59
IGHV3-41-201ENST00000613121 PLCH1Q4KWH8 1693 aa24.98■■□□□ 1.59
IGHV3-41-201ENST00000613121 CSB-PGBD3P0DP91 1061 aa24.98■■□□□ 1.59
IGHV3-41-201ENST00000613121 TOM1L2Q6ZVM7 507 aa24.98■■□□□ 1.59
IGHV3-41-201ENST00000613121 CRYBG1Q9Y4K1 1723 aa24.98■■□□□ 1.59
IGHV3-41-201ENST00000613121 PIK3C2AO00443 1686 aa24.97■■□□□ 1.59
IGHV3-41-201ENST00000613121 FYB1O15117 783 aa24.97■■□□□ 1.59
IGHV3-41-201ENST00000613121 NWD2Q9ULI1 1742 aa24.97■■□□□ 1.59
IGHV3-41-201ENST00000613121 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.96■■□□□ 1.59
IGHV3-41-201ENST00000613121 KRT27Q7Z3Y8 459 aa24.96■■□□□ 1.59
IGHV3-41-201ENST00000613121 CARD14Q9BXL6 1004 aa24.96■■□□□ 1.59
IGHV3-41-201ENST00000613121 CAMTA1Q9Y6Y1 1673 aa24.95■■□□□ 1.58
IGHV3-41-201ENST00000613121 TCP11L2Q8N4U5 519 aa24.95■■□□□ 1.58
IGHV3-41-201ENST00000613121 GLI3P10071 1580 aa24.95■■□□□ 1.58
IGHV3-41-201ENST00000613121 C11orf95C9JLR9 678 aaPredicted RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms