RNA–Protein interactions for RNA: ENST00000612161.4

SLC38A1-211, Transcript of solute carrier family 38 member 1, humanhuman

TSL 5 BASIC

Gene SLC38A1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-211ENST00000612161 TBC1D9Q6ZT07 1266 aa8.67□□□□□ -1.02
SLC38A1-211ENST00000612161 PPARGC1BQ86YN6 1023 aaKnown RBP8.67□□□□□ -1.02
SLC38A1-211ENST00000612161 RBM46Q8TBY0 533 aaKnown RBP8.67□□□□□ -1.02
SLC38A1-211ENST00000612161 KCNH8Q96L42 1107 aa8.67□□□□□ -1.02
SLC38A1-211ENST00000612161 SMARCA5O60264 1052 aaPredicted RBP8.65□□□□□ -1.02
SLC38A1-211ENST00000612161 SLC34A2O95436 690 aa8.65□□□□□ -1.02
SLC38A1-211ENST00000612161 SSFA2P28290 1259 aa8.65□□□□□ -1.02
SLC38A1-211ENST00000612161 ZC3H6P61129 1189 aaKnown RBP8.65□□□□□ -1.02
SLC38A1-211ENST00000612161 NPAS4Q8IUM7 802 aa8.65□□□□□ -1.02
SLC38A1-211ENST00000612161 SULF1Q8IWU6 871 aa8.65□□□□□ -1.02
SLC38A1-211ENST00000612161 STK32AQ8WU08 396 aa8.65□□□□□ -1.02
SLC38A1-211ENST00000612161 ZBTB3Q9H5J0 574 aa8.65□□□□□ -1.02
SLC38A1-211ENST00000612161 BICRAQ9NZM4 1560 aa8.65□□□□□ -1.02
SLC38A1-211ENST00000612161 CADPSQ9ULU8 1353 aa8.65□□□□□ -1.02
SLC38A1-211ENST00000612161 UBXN4Q92575 508 aa8.64□□□□□ -1.03
SLC38A1-211ENST00000612161 SALL2Q9Y467 1007 aaPredicted RBP8.64□□□□□ -1.03
SLC38A1-211ENST00000612161 MARSP56192 900 aaKnown RBP8.63□□□□□ -1.03
SLC38A1-211ENST00000612161 CTDSPL2Q05D32 466 aa8.63□□□□□ -1.03
SLC38A1-211ENST00000612161 PSEN2P49810 448 aa8.62□□□□□ -1.03
SLC38A1-211ENST00000612161 SEMA3FQ13275 785 aa8.62□□□□□ -1.03
SLC38A1-211ENST00000612161 RCCD1A6NED2 376 aa8.62□□□□□ -1.03
SLC38A1-211ENST00000612161 THSD4Q6ZMP0 1018 aa8.62□□□□□ -1.03
SLC38A1-211ENST00000612161 NOVA2Q9UNW9 492 aaKnown RBP8.62□□□□□ -1.03
SLC38A1-211ENST00000612161 GOLGA8CPA6NN73 597 aa8.61□□□□□ -1.03
SLC38A1-211ENST00000612161 JPH4Q96JJ6 628 aa8.61□□□□□ -1.03
SLC38A1-211ENST00000612161 SLAIN2Q9P270 581 aa8.61□□□□□ -1.03
SLC38A1-211ENST00000612161 C6orf132Q5T0Z8 1188 aa8.6□□□□□ -1.03
SLC38A1-211ENST00000612161 ANKRD33BA6NCL7 494 aa8.59□□□□□ -1.03
SLC38A1-211ENST00000612161 SF3A1Q15459 793 aaKnown RBP8.59□□□□□ -1.03
SLC38A1-211ENST00000612161 PPP4R3BQ5MIZ7 849 aa8.59□□□□□ -1.03
SLC38A1-211ENST00000612161 LRRN4Q8WUT4 740 aa8.59□□□□□ -1.03
SLC38A1-211ENST00000612161 NCLP19338 710 aaKnown RBP8.58□□□□□ -1.04
SLC38A1-211ENST00000612161 PRSS12P56730 875 aa8.58□□□□□ -1.04
SLC38A1-211ENST00000612161 ZNF787Q6DD87 383 aa8.58□□□□□ -1.04
SLC38A1-211ENST00000612161 DHX37Q8IY37 1157 aaKnown RBP8.58□□□□□ -1.04
SLC38A1-211ENST00000612161 DDX11L8A8MPP1 907 aa8.58□□□□□ -1.04
SLC38A1-211ENST00000612161 RECKO95980 971 aa8.58□□□□□ -1.04
SLC38A1-211ENST00000612161 SERPINB4P48594 390 aa8.58□□□□□ -1.04
SLC38A1-211ENST00000612161 NAALADL2Q58DX5 795 aa8.58□□□□□ -1.04
SLC38A1-211ENST00000612161 NFATC2IPQ8NCF5 419 aa8.58□□□□□ -1.04
SLC38A1-211ENST00000612161 HELBQ8NG08 1087 aaPredicted RBP8.58□□□□□ -1.04
SLC38A1-211ENST00000612161 CLP1Q92989 425 aaKnown RBP8.58□□□□□ -1.04
SLC38A1-211ENST00000612161 EYA1Q99502 592 aa8.58□□□□□ -1.04
SLC38A1-211ENST00000612161 CECR2Q9BXF3 1484 aa8.57□□□□□ -1.04
SLC38A1-211ENST00000612161 CC2D2AQ9P2K1 1620 aa8.57□□□□□ -1.04
SLC38A1-211ENST00000612161 FAM196BA6NMK8 535 aa8.57□□□□□ -1.04
SLC38A1-211ENST00000612161 USP46P62068 366 aa8.57□□□□□ -1.04
SLC38A1-211ENST00000612161 FAM69CQ0P6D2 419 aa8.57□□□□□ -1.04
SLC38A1-211ENST00000612161 EPS8L1Q8TE68 723 aa8.57□□□□□ -1.04
SLC38A1-211ENST00000612161 GFRA3O60609 400 aa8.56□□□□□ -1.04
SLC38A1-211ENST00000612161 EIF4G2P78344 907 aaKnown RBP eCLIP8.56□□□□□ -1.041e-6■■■□□ 15
SLC38A1-211ENST00000612161 FBXO33Q7Z6M2 555 aa8.56□□□□□ -1.04
SLC38A1-211ENST00000612161 ANKRD13AQ8IZ07 590 aa8.56□□□□□ -1.04
SLC38A1-211ENST00000612161 NAP1L5Q96NT1 182 aaPredicted RBP8.56□□□□□ -1.04
SLC38A1-211ENST00000612161 HOXA2O43364 376 aa8.55□□□□□ -1.04
SLC38A1-211ENST00000612161 KDM4AO75164 1064 aa8.55□□□□□ -1.04
SLC38A1-211ENST00000612161 FDX1P10109 184 aa8.55□□□□□ -1.04
SLC38A1-211ENST00000612161 PLEKHM2Q8IWE5 1019 aa8.55□□□□□ -1.04
SLC38A1-211ENST00000612161 CDCA7LQ96GN5 454 aa8.55□□□□□ -1.04
SLC38A1-211ENST00000612161 PCDHGC3Q9UN70 934 aa8.54□□□□□ -1.04
SLC38A1-211ENST00000612161 USP17L3A6NCW0 530 aa8.54□□□□□ -1.04
SLC38A1-211ENST00000612161 USP17L4A6NCW7 530 aa8.54□□□□□ -1.04
SLC38A1-211ENST00000612161 FOSBP53539 338 aa8.54□□□□□ -1.04
SLC38A1-211ENST00000612161 RBM10P98175 930 aaKnown RBP8.54□□□□□ -1.04
SLC38A1-211ENST00000612161 USP17L2Q6R6M4 530 aa8.54□□□□□ -1.04
SLC38A1-211ENST00000612161 USP17L1Q7RTZ2 530 aa8.54□□□□□ -1.04
SLC38A1-211ENST00000612161 VPS9D1Q9Y2B5 631 aa8.54□□□□□ -1.04
SLC38A1-211ENST00000612161 KDM4FA0A1W2PPD8 638 aa8.53□□□□□ -1.04
SLC38A1-211ENST00000612161 USP17L15C9J2P7 530 aa8.53□□□□□ -1.04
SLC38A1-211ENST00000612161 USP17L10C9JJH3 530 aa8.53□□□□□ -1.04
SLC38A1-211ENST00000612161 USP17L13C9JLJ4 530 aa8.53□□□□□ -1.04
SLC38A1-211ENST00000612161 USP17L12C9JPN9 530 aa8.53□□□□□ -1.04
SLC38A1-211ENST00000612161 USP17L11C9JVI0 530 aa8.53□□□□□ -1.04
SLC38A1-211ENST00000612161 USP17L21D6R901 530 aa8.53□□□□□ -1.04
SLC38A1-211ENST00000612161 USP17L18D6R9N7 530 aa8.53□□□□□ -1.04
SLC38A1-211ENST00000612161 USP17L22D6RA61 530 aa8.53□□□□□ -1.04
SLC38A1-211ENST00000612161 USP17L17D6RBQ6 530 aa8.53□□□□□ -1.04
SLC38A1-211ENST00000612161 USP17L19D6RCP7 530 aa8.53□□□□□ -1.04
SLC38A1-211ENST00000612161 USP17L20D6RJB6 530 aa8.53□□□□□ -1.04
SLC38A1-211ENST00000612161 LCE2BO14633 110 aa8.53□□□□□ -1.04
SLC38A1-211ENST00000612161 USP17L24Q0WX57 530 aa8.53□□□□□ -1.04
SLC38A1-211ENST00000612161 WNT2BQ93097 391 aa8.53□□□□□ -1.04
SLC38A1-211ENST00000612161 ITGBL1O95965 494 aaPredicted RBP8.52□□□□□ -1.05
SLC38A1-211ENST00000612161 DNAJB2P25686 324 aa8.52□□□□□ -1.05
SLC38A1-211ENST00000612161 PNMA1Q8ND90 353 aa8.52□□□□□ -1.05
SLC38A1-211ENST00000612161 CWC22Q9HCG8 908 aaKnown RBP8.52□□□□□ -1.05
SLC38A1-211ENST00000612161 BIN2Q9UBW5 565 aaPredicted RBP8.52□□□□□ -1.05
SLC38A1-211ENST00000612161 FAM198AQ9UFP1 575 aa8.52□□□□□ -1.05
SLC38A1-211ENST00000612161 PIK3CDO00329 1044 aa8.51□□□□□ -1.05
SLC38A1-211ENST00000612161 MTMR2Q13614 643 aa8.51□□□□□ -1.05
SLC38A1-211ENST00000612161 CRTC2Q53ET0 693 aaPredicted RBP8.51□□□□□ -1.05
SLC38A1-211ENST00000612161 SLF2Q8IX21 1173 aa8.51□□□□□ -1.05
SLC38A1-211ENST00000612161 C1orf216Q8TAB5 229 aa8.51□□□□□ -1.05
SLC38A1-211ENST00000612161 TMEM134Q9H6X4 195 aa8.51□□□□□ -1.05
SLC38A1-211ENST00000612161 ZC3H4Q9UPT8 1303 aaKnown RBP8.51□□□□□ -1.05
SLC38A1-211ENST00000612161 ATP2B4P23634 1241 aa8.51□□□□□ -1.05
SLC38A1-211ENST00000612161 ZNF775Q96BV0 537 aaPredicted RBP8.51□□□□□ -1.05
SLC38A1-211ENST00000612161 MYO15BQ96JP2 1530 aa8.5□□□□□ -1.05
SLC38A1-211ENST00000612161 USP17L5A8MUK1 530 aa8.5□□□□□ -1.05
SLC38A1-211ENST00000612161 CFAP99D6REC4 459 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms