RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.73□□□□□ -0.21
CDH4-202ENST00000611855 SMC5Q8IY18 1101 aa13.73□□□□□ -0.21
CDH4-202ENST00000611855 FBLN1P23142 703 aa13.73□□□□□ -0.21
CDH4-202ENST00000611855 CCDC173Q0VFZ6 552 aa13.73□□□□□ -0.21
CDH4-202ENST00000611855 PRDM4Q9UKN5 801 aa13.73□□□□□ -0.21
CDH4-202ENST00000611855 NOS1P29475 1434 aa13.73□□□□□ -0.21
CDH4-202ENST00000611855 ABCA6Q8N139 1617 aa13.73□□□□□ -0.21
CDH4-202ENST00000611855 KANK1Q14678 1352 aa13.73□□□□□ -0.21
CDH4-202ENST00000611855 OFD1O75665 1012 aa13.72□□□□□ -0.21
CDH4-202ENST00000611855 TRIM35Q9UPQ4 493 aa13.72□□□□□ -0.21
CDH4-202ENST00000611855 AK9Q5TCS8 1911 aa13.72□□□□□ -0.21
CDH4-202ENST00000611855 UQCRHLA0A096LP55 91 aa13.72□□□□□ -0.21
CDH4-202ENST00000611855 UQCRHP07919 91 aa13.72□□□□□ -0.21
CDH4-202ENST00000611855 CHD1LQ86WJ1 897 aa13.72□□□□□ -0.21
CDH4-202ENST00000611855 STK26Q9P289 416 aa13.72□□□□□ -0.21
CDH4-202ENST00000611855 GAS2L2Q8NHY3 880 aa13.72□□□□□ -0.21
CDH4-202ENST00000611855 THUMPD2Q9BTF0 503 aaKnown RBP13.72□□□□□ -0.21
CDH4-202ENST00000611855 ZBTB40Q9NUA8 1239 aa13.72□□□□□ -0.21
CDH4-202ENST00000611855 ISY1Q9ULR0 285 aaKnown RBP13.72□□□□□ -0.21
CDH4-202ENST00000611855 PLCH2O75038 1416 aa13.71□□□□□ -0.21
CDH4-202ENST00000611855 CCDC27Q2M243 656 aa13.71□□□□□ -0.21
CDH4-202ENST00000611855 ZNF518AQ6AHZ1 1483 aa13.71□□□□□ -0.22
CDH4-202ENST00000611855 DDIT3P35638 169 aa13.7□□□□□ -0.22
CDH4-202ENST00000611855 RAB3GAP1Q15042 981 aa13.7□□□□□ -0.22
CDH4-202ENST00000611855 KIF2CQ99661 725 aa13.7□□□□□ -0.22
CDH4-202ENST00000611855 NUCB1Q02818 461 aa13.7□□□□□ -0.22
CDH4-202ENST00000611855 GOLGA6L22H0YM25 854 aa13.7□□□□□ -0.22
CDH4-202ENST00000611855 RBM25P49756 843 aaKnown RBP13.7□□□□□ -0.22
CDH4-202ENST00000611855 CYB5RLQ6IPT4 315 aa13.7□□□□□ -0.22
CDH4-202ENST00000611855 CHAMP1Q96JM3 812 aa13.7□□□□□ -0.22
CDH4-202ENST00000611855 STAC3Q96MF2 364 aa13.69□□□□□ -0.22
CDH4-202ENST00000611855 SKOR2Q2VWA4 1001 aaPredicted RBP13.69□□□□□ -0.22
CDH4-202ENST00000611855 TBC1D9Q6ZT07 1266 aa13.69□□□□□ -0.22
CDH4-202ENST00000611855 CD109Q6YHK3 1445 aa13.69□□□□□ -0.22
CDH4-202ENST00000611855 APBB1O00213 710 aa13.68□□□□□ -0.22
CDH4-202ENST00000611855 ZMYM3Q14202 1370 aa13.68□□□□□ -0.22
CDH4-202ENST00000611855 FOXD4L5Q5VV16 416 aaPredicted RBP13.68□□□□□ -0.22
CDH4-202ENST00000611855 CAVIN1Q6NZI2 390 aaKnown RBP13.68□□□□□ -0.22
CDH4-202ENST00000611855 GGT6Q6P531 493 aa13.68□□□□□ -0.22
CDH4-202ENST00000611855 FOXD4L4Q8WXT5 416 aaPredicted RBP13.68□□□□□ -0.22
CDH4-202ENST00000611855 K7ELQ4 463 aaPredicted RBP13.67□□□□□ -0.22
CDH4-202ENST00000611855 SRPK2P78362 688 aaKnown RBP13.67□□□□□ -0.22
CDH4-202ENST00000611855 MCTP1Q6DN14 999 aa13.67□□□□□ -0.22
CDH4-202ENST00000611855 MAP3K4Q9Y6R4 1608 aa13.67□□□□□ -0.22
CDH4-202ENST00000611855 SNX21Q969T3 373 aa13.67□□□□□ -0.22
CDH4-202ENST00000611855 PKP1Q13835 747 aa13.67□□□□□ -0.22
CDH4-202ENST00000611855 MPNDQ8N594 471 aa13.66□□□□□ -0.22
CDH4-202ENST00000611855 ABCC1P33527 1531 aa13.66□□□□□ -0.22
CDH4-202ENST00000611855 NCOA3Q9Y6Q9 1424 aa13.66□□□□□ -0.22
CDH4-202ENST00000611855 ATAD2Q6PL18 1390 aa13.66□□□□□ -0.22
CDH4-202ENST00000611855 PLEKHF1Q96S99 279 aa13.66□□□□□ -0.22
CDH4-202ENST00000611855 IPO8O15397 1037 aaKnown RBP13.65□□□□□ -0.22
CDH4-202ENST00000611855 BAG4O95429 457 aaKnown RBP13.64□□□□□ -0.23
CDH4-202ENST00000611855 HMOX1P09601 288 aa13.64□□□□□ -0.23
CDH4-202ENST00000611855 DNTTIP2Q5QJE6 756 aaKnown RBP13.64□□□□□ -0.23
CDH4-202ENST00000611855 TSPYL6Q8N831 410 aa13.64□□□□□ -0.23
CDH4-202ENST00000611855 PPP1R9BQ96SB3 815 aa13.64□□□□□ -0.23
CDH4-202ENST00000611855 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
CDH4-202ENST00000611855 BMP2KLQ5H9B9 411 aa13.64□□□□□ -0.23
CDH4-202ENST00000611855 MAP7D2Q96T17 732 aa13.63□□□□□ -0.23
CDH4-202ENST00000611855 CIZ1Q9ULV3 898 aaPredicted RBP13.63□□□□□ -0.23
CDH4-202ENST00000611855 ZFYVE16Q7Z3T8 1539 aa13.63□□□□□ -0.23
CDH4-202ENST00000611855 JARID2Q92833 1246 aaPredicted RBP13.63□□□□□ -0.23
CDH4-202ENST00000611855 C14orf93Q9H972 538 aaKnown RBP13.63□□□□□ -0.23
CDH4-202ENST00000611855 MINK1Q8N4C8 1332 aaPredicted RBP13.63□□□□□ -0.23
CDH4-202ENST00000611855 KIF16BQ96L93 1317 aa13.63□□□□□ -0.23
CDH4-202ENST00000611855 C16orf71Q8IYS4 520 aaPredicted RBP13.62□□□□□ -0.23
CDH4-202ENST00000611855 EVC2Q86UK5 1308 aa13.62□□□□□ -0.23
CDH4-202ENST00000611855 TPRNQ4KMQ1 711 aa13.62□□□□□ -0.23
CDH4-202ENST00000611855 SIRT2Q8IXJ6 389 aa13.62□□□□□ -0.23
CDH4-202ENST00000611855 RNF214Q8ND24 703 aa13.62□□□□□ -0.23
CDH4-202ENST00000611855 TSC1Q92574 1164 aa13.62□□□□□ -0.23
CDH4-202ENST00000611855 MROH2AA6NES4 1674 aa13.62□□□□□ -0.23
CDH4-202ENST00000611855 PPIP5K1Q6PFW1 1433 aa13.62□□□□□ -0.23
CDH4-202ENST00000611855 PTMAP06454 111 aaKnown RBP13.62□□□□□ -0.23
CDH4-202ENST00000611855 NPM1P06748 294 aaKnown RBP eCLIP13.62□□□□□ -0.23
CDH4-202ENST00000611855 TET3O43151 1660 aa13.61□□□□□ -0.23
CDH4-202ENST00000611855 RBSNQ9H1K0 784 aa13.61□□□□□ -0.23
CDH4-202ENST00000611855 PRKAR2BP31323 418 aa13.61□□□□□ -0.23
CDH4-202ENST00000611855 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDH4-202ENST00000611855 CT47B1P0C2W7 299 aaPredicted RBP13.61□□□□□ -0.23
CDH4-202ENST00000611855 ZBTB7BO15156 539 aaPredicted RBP13.6□□□□□ -0.23
CDH4-202ENST00000611855 DIAPH1O60610 1272 aaKnown RBP13.6□□□□□ -0.23
CDH4-202ENST00000611855 OTUD7AQ8TE49 926 aaPredicted RBP13.6□□□□□ -0.23
CDH4-202ENST00000611855 SBNO2Q9Y2G9 1366 aa13.6□□□□□ -0.23
CDH4-202ENST00000611855 MYOM2P54296 1465 aa13.6□□□□□ -0.23
CDH4-202ENST00000611855 PRPF40AO75400 957 aaKnown RBP13.6□□□□□ -0.23
CDH4-202ENST00000611855 GSPT1P15170 499 aaKnown RBP13.6□□□□□ -0.23
CDH4-202ENST00000611855 FOXD4L6Q3SYB3 417 aaPredicted RBP13.6□□□□□ -0.23
CDH4-202ENST00000611855 FOXD4L3Q6VB84 417 aaPredicted RBP13.6□□□□□ -0.23
CDH4-202ENST00000611855 ZGPATQ8N5A5 531 aaKnown RBP13.6□□□□□ -0.23
CDH4-202ENST00000611855 A0A1W2PP64 1363 aa13.6□□□□□ -0.23
CDH4-202ENST00000611855 QRICH2Q9H0J4 1663 aa13.6□□□□□ -0.23
CDH4-202ENST00000611855 PRIM1P49642 420 aaKnown RBP13.59□□□□□ -0.23
CDH4-202ENST00000611855 KIF1BO60333 1816 aa13.59□□□□□ -0.23
CDH4-202ENST00000611855 KIAA1210Q9ULL0 1709 aa13.59□□□□□ -0.23
CDH4-202ENST00000611855 FAM177BA6PVY3 158 aa13.59□□□□□ -0.23
CDH4-202ENST00000611855 KLHL40Q2TBA0 621 aa13.59□□□□□ -0.23
CDH4-202ENST00000611855 PHACTR3Q96KR7 559 aa13.59□□□□□ -0.23
CDH4-202ENST00000611855 SHROOM2Q13796 1616 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms