RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 SPINK5Q9NQ38 1064 aaPredicted RBP4.62□□□□□ -1.67
RNF38-210ENST00000611646 EMILIN1Q9Y6C2 1016 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 GPRASP1Q5JY77 1395 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 IQGAP2Q13576 1575 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 ZNF608Q9ULD9 1512 aaPredicted RBP4.62□□□□□ -1.67
RNF38-210ENST00000611646 FAM83GA6ND36 823 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 F6X3S4 739 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 TRIM27P14373 513 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 STK11IPQ8N1F8 1099 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 NEUROD6Q96NK8 337 aa4.62□□□□□ -1.67
RNF38-210ENST00000611646 BECN2A8MW95 431 aa4.61□□□□□ -1.67
RNF38-210ENST00000611646 K7ELQ4 463 aaPredicted RBP4.61□□□□□ -1.67
RNF38-210ENST00000611646 NUCB2P80303 420 aa4.61□□□□□ -1.67
RNF38-210ENST00000611646 XPCQ01831 940 aaPredicted RBP4.61□□□□□ -1.67
RNF38-210ENST00000611646 WDR63Q8IWG1 891 aa4.61□□□□□ -1.67
RNF38-210ENST00000611646 SLC26A8Q96RN1 970 aa4.61□□□□□ -1.67
RNF38-210ENST00000611646 MRC2Q9UBG0 1479 aa4.61□□□□□ -1.67
RNF38-210ENST00000611646 PES1O00541 588 aaKnown RBP4.61□□□□□ -1.67
RNF38-210ENST00000611646 ZKSCAN1P17029 563 aaPredicted RBP4.61□□□□□ -1.67
RNF38-210ENST00000611646 NUTM1Q86Y26 1132 aa4.61□□□□□ -1.67
RNF38-210ENST00000611646 PCDHB15Q9Y5E8 787 aa4.61□□□□□ -1.67
RNF38-210ENST00000611646 URB2Q14146 1524 aaKnown RBP4.61□□□□□ -1.67
RNF38-210ENST00000611646 GOLGA6L19H0YKK7 550 aa4.61□□□□□ -1.67
RNF38-210ENST00000611646 APPP05067 770 aa4.61□□□□□ -1.67
RNF38-210ENST00000611646 SYTL4Q96C24 671 aaPredicted RBP4.61□□□□□ -1.67
RNF38-210ENST00000611646 DNAJC2Q99543 621 aaKnown RBP4.61□□□□□ -1.67
RNF38-210ENST00000611646 PLEKHH2Q8IVE3 1493 aa4.61□□□□□ -1.67
RNF38-210ENST00000611646 MAGI1Q96QZ7 1491 aaPredicted RBP4.61□□□□□ -1.67
RNF38-210ENST00000611646 CLSTN1O94985 981 aa4.61□□□□□ -1.67
RNF38-210ENST00000611646 SSFA2P28290 1259 aa4.61□□□□□ -1.67
RNF38-210ENST00000611646 G3BP1Q13283 466 aaKnown RBP eCLIP4.61□□□□□ -1.67
RNF38-210ENST00000611646 CSPP1Q1MSJ5 1256 aa4.61□□□□□ -1.67
RNF38-210ENST00000611646 NME9Q86XW9 330 aa4.61□□□□□ -1.67
RNF38-210ENST00000611646 OSCARQ8IYS5 282 aa4.61□□□□□ -1.67
RNF38-210ENST00000611646 ABTB2Q8N961 1025 aa4.61□□□□□ -1.67
RNF38-210ENST00000611646 UPF3BQ9BZI7 483 aaKnown RBP4.61□□□□□ -1.67
RNF38-210ENST00000611646 NKTRP30414 1462 aaKnown RBP4.61□□□□□ -1.67
RNF38-210ENST00000611646 HTATSF1O43719 755 aaKnown RBP4.6□□□□□ -1.67
RNF38-210ENST00000611646 C8orf34Q49A92 452 aa4.6□□□□□ -1.67
RNF38-210ENST00000611646 USHBP1Q8N6Y0 703 aa4.6□□□□□ -1.67
RNF38-210ENST00000611646 RASSF8Q8NHQ8 419 aa4.6□□□□□ -1.67
RNF38-210ENST00000611646 IFT57Q9NWB7 429 aa4.6□□□□□ -1.67
RNF38-210ENST00000611646 RLBP1P12271 317 aa4.6□□□□□ -1.67
RNF38-210ENST00000611646 FBXO31Q5XUX0 539 aaPredicted RBP4.6□□□□□ -1.67
RNF38-210ENST00000611646 RIC3Q7Z5B4 369 aa4.6□□□□□ -1.67
RNF38-210ENST00000611646 PANK2Q9BZ23 570 aa4.6□□□□□ -1.67
RNF38-210ENST00000611646 SYCE3A1L190 88 aa4.6□□□□□ -1.67
RNF38-210ENST00000611646 FAM177BA6PVY3 158 aa4.6□□□□□ -1.67
RNF38-210ENST00000611646 CWC27Q6UX04 472 aaKnown RBP4.6□□□□□ -1.67
RNF38-210ENST00000611646 TTC5Q8N0Z6 440 aa4.6□□□□□ -1.67
RNF38-210ENST00000611646 GCC1Q96CN9 775 aa4.6□□□□□ -1.67
RNF38-210ENST00000611646 GDPD2Q9HCC8 539 aa4.6□□□□□ -1.67
RNF38-210ENST00000611646 LRPPRCP42704 1394 aaKnown RBP4.6□□□□□ -1.67
RNF38-210ENST00000611646 NEXNQ0ZGT2 675 aa4.6□□□□□ -1.67
RNF38-210ENST00000611646 RBM42Q9BTD8 480 aaKnown RBP4.6□□□□□ -1.67
RNF38-210ENST00000611646 FSD1Q9BTV5 496 aa4.6□□□□□ -1.67
RNF38-210ENST00000611646 NLRP2Q9NX02 1062 aa4.6□□□□□ -1.67
RNF38-210ENST00000611646 DMRT2Q9Y5R5 561 aa4.6□□□□□ -1.67
RNF38-210ENST00000611646 PLEKHH1Q9ULM0 1364 aa4.6□□□□□ -1.67
RNF38-210ENST00000611646 PPFIA3O75145 1194 aa4.59□□□□□ -1.67
RNF38-210ENST00000611646 MYL6BP14649 208 aa4.59□□□□□ -1.67
RNF38-210ENST00000611646 FMNL2Q96PY5 1086 aa4.59□□□□□ -1.67
RNF38-210ENST00000611646 ATP6V1DQ9Y5K8 247 aa4.59□□□□□ -1.67
RNF38-210ENST00000611646 IFT140Q96RY7 1462 aa4.59□□□□□ -1.67
RNF38-210ENST00000611646 KIAA0586Q9BVV6 1533 aa4.59□□□□□ -1.67
RNF38-210ENST00000611646 GNAI2P04899 355 aa4.59□□□□□ -1.67
RNF38-210ENST00000611646 RUFY2Q8WXA3 655 aa4.59□□□□□ -1.67
RNF38-210ENST00000611646 TNPO1Q92973 898 aaKnown RBP4.59□□□□□ -1.67
RNF38-210ENST00000611646 TPM4P67936 248 aa4.59□□□□□ -1.67
RNF38-210ENST00000611646 RABEP1Q15276 862 aa4.59□□□□□ -1.67
RNF38-210ENST00000611646 HDGFL1Q5TGJ6 251 aa4.59□□□□□ -1.67
RNF38-210ENST00000611646 RBM27Q9P2N5 1060 aaKnown RBP4.59□□□□□ -1.67
RNF38-210ENST00000611646 CCDC141Q6ZP82 1450 aa4.59□□□□□ -1.67
RNF38-210ENST00000611646 ERC2O15083 957 aa4.59□□□□□ -1.68
RNF38-210ENST00000611646 ESCO1Q5FWF5 840 aa4.59□□□□□ -1.68
RNF38-210ENST00000611646 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.59□□□□□ -1.68
RNF38-210ENST00000611646 DHX29Q7Z478 1369 aaKnown RBP4.59□□□□□ -1.68
RNF38-210ENST00000611646 DTNBO60941 627 aa4.59□□□□□ -1.68
RNF38-210ENST00000611646 CAMK4Q16566 473 aa4.59□□□□□ -1.68
RNF38-210ENST00000611646 WASHC4Q2M389 1173 aa4.59□□□□□ -1.68
RNF38-210ENST00000611646 CCDC30Q5VVM6 783 aa4.59□□□□□ -1.68
RNF38-210ENST00000611646 CHMP4CQ96CF2 233 aa4.59□□□□□ -1.68
RNF38-210ENST00000611646 CCDC85AQ96PX6 553 aaPredicted RBP4.59□□□□□ -1.68
RNF38-210ENST00000611646 LRRCC1Q9C099 1032 aa4.59□□□□□ -1.68
RNF38-210ENST00000611646 TSPY26PQ9H489 355 aa4.59□□□□□ -1.68
RNF38-210ENST00000611646 MTMR7Q9Y216 660 aa4.59□□□□□ -1.68
RNF38-210ENST00000611646 ESPNB1AK53 854 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 FYB1O15117 783 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 ZNF771Q7L3S4 317 aaPredicted RBP4.58□□□□□ -1.68
RNF38-210ENST00000611646 FERMT3Q86UX7 667 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 C16orf71Q8IYS4 520 aaPredicted RBP4.58□□□□□ -1.68
RNF38-210ENST00000611646 CNTROBQ8N137 903 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 CPLX1O14810 134 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 SRGAP3O43295 1099 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 ATP2B1P20020 1258 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 NFE2L2Q16236 605 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 SASS6Q6UVJ0 657 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 ZRANB1Q9UGI0 708 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 UTRNP46939 3433 aa4.58□□□□□ -1.68
RNF38-210ENST00000611646 GPATCH8Q9UKJ3 1502 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms