RNA–Protein interactions for RNA: ENST00000611428.5

CD99-210, Transcript of CD99 molecule (Xg blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD99, Length 1,243 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-210ENST00000611428 CABP1Q9NZU7 370 aa28.46■■■□□ 2.15
CD99-210ENST00000611428 USP21Q9UK80 565 aa28.46■■■□□ 2.15
CD99-210ENST00000611428 RXRBP28702 533 aa28.45■■■□□ 2.14
CD99-210ENST00000611428 CABLES1Q8TDN4 633 aa28.44■■■□□ 2.14
CD99-210ENST00000611428 PLEKHG5O94827 1062 aa28.43■■■□□ 2.14
CD99-210ENST00000611428 QTRT2Q9H974 415 aaKnown RBP28.43■■■□□ 2.14
CD99-210ENST00000611428 ST20-MTHFSA0A0A6YYL1 179 aa28.41■■■□□ 2.14
CD99-210ENST00000611428 TRPC5Q9UL62 973 aaPredicted RBP28.41■■■□□ 2.14
CD99-210ENST00000611428 ABCA3Q99758 1704 aa28.4■■■□□ 2.14
CD99-210ENST00000611428 ZNF692Q9BU19 519 aaPredicted RBP28.4■■■□□ 2.14
CD99-210ENST00000611428 USP47Q96K76 1375 aa28.39■■■□□ 2.14
CD99-210ENST00000611428 RBM6P78332 1123 aaKnown RBP28.39■■■□□ 2.14
CD99-210ENST00000611428 PUS7Q96PZ0 661 aaKnown RBP28.39■■■□□ 2.14
CD99-210ENST00000611428 USP6P35125 1406 aa28.38■■■□□ 2.13
CD99-210ENST00000611428 ABTB2Q8N961 1025 aa28.38■■■□□ 2.13
CD99-210ENST00000611428 CDK12Q9NYV4 1490 aaPredicted RBP28.36■■■□□ 2.13
CD99-210ENST00000611428 SLIT2O94813 1529 aa28.36■■■□□ 2.13
CD99-210ENST00000611428 TESK2Q96S53 571 aa28.35■■■□□ 2.13
CD99-210ENST00000611428 BCL9LQ86UU0 1499 aa28.34■■■□□ 2.13
CD99-210ENST00000611428 UNC5CLQ8IV45 518 aa28.34■■■□□ 2.13
CD99-210ENST00000611428 ATRNO75882 1429 aa28.34■■■□□ 2.13
CD99-210ENST00000611428 NLRP13Q86W25 1043 aa28.33■■■□□ 2.13
CD99-210ENST00000611428 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.32■■■□□ 2.12
CD99-210ENST00000611428 NUTM2GQ5VZR2 741 aa28.31■■■□□ 2.12
CD99-210ENST00000611428 CRYBG1Q9Y4K1 1723 aa28.3■■■□□ 2.12
CD99-210ENST00000611428 CPSF1Q10570 1443 aaKnown RBP28.3■■■□□ 2.12
CD99-210ENST00000611428 TMF1P82094 1093 aa28.3■■■□□ 2.12
CD99-210ENST00000611428 TMC1Q8TDI8 760 aa28.3■■■□□ 2.12
CD99-210ENST00000611428 NWD2Q9ULI1 1742 aa28.29■■■□□ 2.12
CD99-210ENST00000611428 NINLQ9Y2I6 1382 aa28.29■■■□□ 2.12
CD99-210ENST00000611428 FAM83GA6ND36 823 aa28.29■■■□□ 2.12
CD99-210ENST00000611428 SSH2Q76I76 1423 aa28.28■■■□□ 2.12
CD99-210ENST00000611428 KTN1Q86UP2 1357 aaKnown RBP28.28■■■□□ 2.12
CD99-210ENST00000611428 HDGFL2Q7Z4V5 671 aaPredicted RBP28.28■■■□□ 2.12
CD99-210ENST00000611428 PRDM11Q9NQV5 511 aa28.28■■■□□ 2.12
CD99-210ENST00000611428 AKAP12Q02952 1782 aa28.28■■■□□ 2.12
CD99-210ENST00000611428 COL14A1Q05707 1796 aaKnown RBP28.27■■■□□ 2.12
CD99-210ENST00000611428 USP19O94966 1318 aa28.27■■■□□ 2.12
CD99-210ENST00000611428 TTC21AQ8NDW8 1320 aa28.27■■■□□ 2.12
CD99-210ENST00000611428 CDCA8Q53HL2 280 aa28.27■■■□□ 2.12
CD99-210ENST00000611428 PHRF1Q9P1Y6 1649 aaKnown RBP28.27■■■□□ 2.12
CD99-210ENST00000611428 PLCH1Q4KWH8 1693 aa28.26■■■□□ 2.12
CD99-210ENST00000611428 TERF2IPQ9NYB0 399 aa28.26■■■□□ 2.11
CD99-210ENST00000611428 TTC21BQ7Z4L5 1316 aa28.25■■■□□ 2.11
CD99-210ENST00000611428 NLRP6P59044 892 aa28.25■■■□□ 2.11
CD99-210ENST00000611428 GJD4Q96KN9 370 aaPredicted RBP28.25■■■□□ 2.11
CD99-210ENST00000611428 BTG4Q9NY30 223 aa28.23■■■□□ 2.11
CD99-210ENST00000611428 KIAA0232Q92628 1395 aa28.23■■■□□ 2.11
CD99-210ENST00000611428 RGS12O14924 1447 aa28.22■■■□□ 2.11
CD99-210ENST00000611428 VPS72Q15906 364 aa28.22■■■□□ 2.11
CD99-210ENST00000611428 SLC12A5Q9H2X9 1139 aa28.22■■■□□ 2.11
CD99-210ENST00000611428 NRKQ7Z2Y5 1582 aa28.21■■■□□ 2.11
CD99-210ENST00000611428 GCP02774 474 aa28.21■■■□□ 2.11
CD99-210ENST00000611428 ZC3H6P61129 1189 aaKnown RBP28.21■■■□□ 2.11
CD99-210ENST00000611428 MON2Q7Z3U7 1717 aa28.21■■■□□ 2.11
CD99-210ENST00000611428 CCDC9Q9Y3X0 531 aaKnown RBP28.2■■■□□ 2.1
CD99-210ENST00000611428 CPDO75976 1380 aa28.2■■■□□ 2.1
CD99-210ENST00000611428 CD163L1Q9NR16 1453 aa28.19■■■□□ 2.1
CD99-210ENST00000611428 PIK3C2AO00443 1686 aa28.19■■■□□ 2.1
CD99-210ENST00000611428 EDC4Q6P2E9 1401 aaKnown RBP28.18■■■□□ 2.1
CD99-210ENST00000611428 EIF4G2P78344 907 aaKnown RBP eCLIP28.17■■■□□ 2.1
CD99-210ENST00000611428 A0A1W2PP64 1363 aa28.16■■■□□ 2.1
CD99-210ENST00000611428 KCNH5Q8NCM2 988 aa28.16■■■□□ 2.1
CD99-210ENST00000611428 SLIT3O75094 1523 aa28.16■■■□□ 2.1
CD99-210ENST00000611428 NRAPQ86VF7 1730 aa28.15■■■□□ 2.1
CD99-210ENST00000611428 CHRNA2Q15822 529 aa28.15■■■□□ 2.1
CD99-210ENST00000611428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.14■■■□□ 2.16e-8■□□□□ 9.1
CD99-210ENST00000611428 GLI3P10071 1580 aa28.12■■■□□ 2.09
CD99-210ENST00000611428 ANKRD36BQ8N2N9 1353 aa28.11■■■□□ 2.09
CD99-210ENST00000611428 USP31Q70CQ4 1352 aa28.11■■■□□ 2.09
CD99-210ENST00000611428 EVA1CP58658 441 aa28.09■■■□□ 2.09
CD99-210ENST00000611428 STRN4Q9NRL3 753 aa28.07■■■□□ 2.08
CD99-210ENST00000611428 SPATA31A5Q5VU36 1347 aa28.07■■■□□ 2.08
CD99-210ENST00000611428 SPATA31A7Q8IWB4 1347 aa28.07■■■□□ 2.08
CD99-210ENST00000611428 ZBTB7CA1YPR0 619 aa28.06■■■□□ 2.08
CD99-210ENST00000611428 HSPA5P11021 654 aaKnown RBP28.06■■■□□ 2.08
CD99-210ENST00000611428 NME9Q86XW9 330 aa28.06■■■□□ 2.08
CD99-210ENST00000611428 AATKQ6ZMQ8 1374 aa28.06■■■□□ 2.08
CD99-210ENST00000611428 ONECUT3O60422 494 aaPredicted RBP28.05■■■□□ 2.08
CD99-210ENST00000611428 LMO7Q8WWI1 1683 aa28.05■■■□□ 2.08
CD99-210ENST00000611428 USP54Q70EL1 1684 aa28.04■■■□□ 2.08
CD99-210ENST00000611428 CAMTA1Q9Y6Y1 1673 aa28.03■■■□□ 2.08
CD99-210ENST00000611428 SEPT12Q8IYM1 358 aa28.03■■■□□ 2.08
CD99-210ENST00000611428 A0A0G2JS52 829 aa28.02■■■□□ 2.08
CD99-210ENST00000611428 SOX12O15370 315 aa28.02■■■□□ 2.08
CD99-210ENST00000611428 MYT1Q01538 1121 aa28.02■■■□□ 2.08
CD99-210ENST00000611428 ARHGEF25Q86VW2 580 aa28.02■■■□□ 2.08
CD99-210ENST00000611428 UPF1Q92900 1129 aaKnown RBP eCLIP28.02■■■□□ 2.082e-12■■■■■ 47.6
CD99-210ENST00000611428 FAM98CQ17RN3 349 aaKnown RBP28.01■■■□□ 2.07
CD99-210ENST00000611428 SPATA31A1Q5TZJ5 1347 aa28■■■□□ 2.07
CD99-210ENST00000611428 ZRANB1Q9UGI0 708 aa28■■■□□ 2.07
CD99-210ENST00000611428 NFAT5O94916 1531 aa28■■■□□ 2.07
CD99-210ENST00000611428 COL5A2P05997 1499 aaPredicted RBP28■■■□□ 2.07
CD99-210ENST00000611428 COG3Q96JB2 828 aa27.99■■■□□ 2.07
CD99-210ENST00000611428 OVOS2A0A0J9YW53 1432 aa27.99■■■□□ 2.07
CD99-210ENST00000611428 OVOS2Q6IE36 1432 aa27.99■■■□□ 2.07
CD99-210ENST00000611428 ABCC6O95255 1503 aa27.97■■■□□ 2.07
CD99-210ENST00000611428 LARP1Q6PKG0 1096 aaKnown RBP27.96■■■□□ 2.07
CD99-210ENST00000611428 POLR3GLQ9BT43 218 aa27.96■■■□□ 2.07
CD99-210ENST00000611428 THRAP3Q9Y2W1 955 aaKnown RBP27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms