RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 ABCC10Q5T3U5 1492 aa8.46□□□□□ -1.06
SYNPO2-206ENST00000610556 ZMYM4Q5VZL5 1548 aa8.46□□□□□ -1.06
SYNPO2-206ENST00000610556 DUOX2Q9NRD8 1548 aa8.46□□□□□ -1.06
SYNPO2-206ENST00000610556 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.46□□□□□ -1.06
SYNPO2-206ENST00000610556 FCHSD2O94868 740 aa8.45□□□□□ -1.06
SYNPO2-206ENST00000610556 FKBP5Q13451 457 aaPredicted RBP8.45□□□□□ -1.06
SYNPO2-206ENST00000610556 NUTM2GQ5VZR2 741 aa8.45□□□□□ -1.06
SYNPO2-206ENST00000610556 FANCAO15360 1455 aa8.45□□□□□ -1.06
SYNPO2-206ENST00000610556 PLA2R1Q13018 1463 aa8.45□□□□□ -1.06
SYNPO2-206ENST00000610556 CDC42BPAQ5VT25 1732 aa8.45□□□□□ -1.06
SYNPO2-206ENST00000610556 INTS3Q68E01 1043 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-206ENST00000610556 CAVIN1Q6NZI2 390 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-206ENST00000610556 GCC1Q96CN9 775 aa8.45□□□□□ -1.06
SYNPO2-206ENST00000610556 TSPYL4Q9UJ04 414 aa8.45□□□□□ -1.06
SYNPO2-206ENST00000610556 REC8O95072 547 aa8.45□□□□□ -1.06
SYNPO2-206ENST00000610556 EIF2S2P20042 333 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-206ENST00000610556 HSP90AA2PQ14568 343 aaPredicted RBP8.45□□□□□ -1.06
SYNPO2-206ENST00000610556 PANK2Q9BZ23 570 aa8.45□□□□□ -1.06
SYNPO2-206ENST00000610556 GRPEL1Q9HAV7 217 aa8.45□□□□□ -1.06
SYNPO2-206ENST00000610556 MIS18AQ9NYP9 233 aa8.45□□□□□ -1.06
SYNPO2-206ENST00000610556 POLR3AO14802 1390 aaPredicted RBP8.44□□□□□ -1.06
SYNPO2-206ENST00000610556 RPGRIP1LQ68CZ1 1315 aa8.44□□□□□ -1.06
SYNPO2-206ENST00000610556 FYB1O15117 783 aa8.44□□□□□ -1.06
SYNPO2-206ENST00000610556 NME9Q86XW9 330 aa8.44□□□□□ -1.06
SYNPO2-206ENST00000610556 SLC52A1Q9NWF4 448 aa8.44□□□□□ -1.06
SYNPO2-206ENST00000610556 K7ELQ4 463 aaPredicted RBP8.44□□□□□ -1.06
SYNPO2-206ENST00000610556 NFE2L2Q16236 605 aa8.44□□□□□ -1.06
SYNPO2-206ENST00000610556 RNF214Q8ND24 703 aa8.44□□□□□ -1.06
SYNPO2-206ENST00000610556 NAP1L2Q9ULW6 460 aaPredicted RBP8.44□□□□□ -1.06
SYNPO2-206ENST00000610556 ZNF521Q96K83 1311 aa8.44□□□□□ -1.06
SYNPO2-206ENST00000610556 FAM83GA6ND36 823 aa8.44□□□□□ -1.06
SYNPO2-206ENST00000610556 SLC4A2P04920 1241 aa8.44□□□□□ -1.06
SYNPO2-206ENST00000610556 NASPP49321 788 aaPredicted RBP8.44□□□□□ -1.06
SYNPO2-206ENST00000610556 FGD1P98174 961 aa8.44□□□□□ -1.06
SYNPO2-206ENST00000610556 FAM69CQ0P6D2 419 aa8.44□□□□□ -1.06
SYNPO2-206ENST00000610556 ZCCHC11Q5TAX3 1644 aaKnown RBP8.43□□□□□ -1.06
SYNPO2-206ENST00000610556 SMARCA5O60264 1052 aaPredicted RBP8.43□□□□□ -1.06
SYNPO2-206ENST00000610556 CDC42BPBQ9Y5S2 1711 aa8.43□□□□□ -1.06
SYNPO2-206ENST00000610556 PRPF40AO75400 957 aaKnown RBP8.43□□□□□ -1.06
SYNPO2-206ENST00000610556 NEK4P51957 841 aa8.43□□□□□ -1.06
SYNPO2-206ENST00000610556 MCM10Q7L590 875 aa8.43□□□□□ -1.06
SYNPO2-206ENST00000610556 RBM42Q9BTD8 480 aaKnown RBP8.43□□□□□ -1.06
SYNPO2-206ENST00000610556 GOLGA6L4A6NEF3 574 aa8.42□□□□□ -1.06
SYNPO2-206ENST00000610556 TNPO1Q92973 898 aaKnown RBP8.42□□□□□ -1.06
SYNPO2-206ENST00000610556 NUCB2P80303 420 aa8.42□□□□□ -1.06
SYNPO2-206ENST00000610556 ATAD2Q6PL18 1390 aa8.42□□□□□ -1.06
SYNPO2-206ENST00000610556 CROCC2H7BZ55 1655 aa8.41□□□□□ -1.06
SYNPO2-206ENST00000610556 RIMBP3CA6NJZ7 1639 aa8.41□□□□□ -1.06
SYNPO2-206ENST00000610556 RIMBP3BA6NNM3 1639 aa8.41□□□□□ -1.06
SYNPO2-206ENST00000610556 RIMBP3Q9UFD9 1639 aa8.41□□□□□ -1.06
SYNPO2-206ENST00000610556 XRCC6P12956 609 aaKnown RBP eCLIP8.41□□□□□ -1.06
SYNPO2-206ENST00000610556 SSFA2P28290 1259 aa8.41□□□□□ -1.06
SYNPO2-206ENST00000610556 MPNDQ8N594 471 aa8.41□□□□□ -1.06
SYNPO2-206ENST00000610556 TSPYL6Q8N831 410 aa8.41□□□□□ -1.06
SYNPO2-206ENST00000610556 ZNF428Q96B54 188 aa8.41□□□□□ -1.06
SYNPO2-206ENST00000610556 UHRF1BP1LA0JNW5 1464 aa8.41□□□□□ -1.06
SYNPO2-206ENST00000610556 ABCC2Q92887 1545 aa8.41□□□□□ -1.06
SYNPO2-206ENST00000610556 TBC1D9Q6ZT07 1266 aa8.41□□□□□ -1.06
SYNPO2-206ENST00000610556 TRMT2AQ8IZ69 625 aaKnown RBP8.41□□□□□ -1.06
SYNPO2-206ENST00000610556 PPRC1Q5VV67 1664 aaKnown RBP8.41□□□□□ -1.06
SYNPO2-206ENST00000610556 HDAC1Q13547 482 aaPredicted RBP8.41□□□□□ -1.06
SYNPO2-206ENST00000610556 VSIG10Q8N0Z9 540 aa8.41□□□□□ -1.06
SYNPO2-206ENST00000610556 ZRANB1Q9UGI0 708 aa8.41□□□□□ -1.06
SYNPO2-206ENST00000610556 WDR7Q9Y4E6 1490 aa8.4□□□□□ -1.06
SYNPO2-206ENST00000610556 RABEP1Q15276 862 aa8.4□□□□□ -1.06
SYNPO2-206ENST00000610556 CCDC27Q2M243 656 aa8.4□□□□□ -1.06
SYNPO2-206ENST00000610556 ADGBQ8N7X0 1667 aa8.4□□□□□ -1.06
SYNPO2-206ENST00000610556 SYAP1Q96A49 352 aaPredicted RBP8.4□□□□□ -1.06
SYNPO2-206ENST00000610556 PHACTR3Q96KR7 559 aa8.4□□□□□ -1.06
SYNPO2-206ENST00000610556 EXOC6BQ9Y2D4 811 aa8.4□□□□□ -1.06
SYNPO2-206ENST00000610556 CHMP3Q9Y3E7 222 aa8.4□□□□□ -1.06
SYNPO2-206ENST00000610556 RTEL1-TNFRSF6BF6WH68 1400 aa8.4□□□□□ -1.06
SYNPO2-206ENST00000610556 EIF2AK4Q9P2K8 1649 aaKnown RBP8.4□□□□□ -1.07
SYNPO2-206ENST00000610556 ESPNB1AK53 854 aa8.4□□□□□ -1.07
SYNPO2-206ENST00000610556 F6X3S4 739 aa8.4□□□□□ -1.07
SYNPO2-206ENST00000610556 ALDH1L2Q3SY69 923 aa8.4□□□□□ -1.07
SYNPO2-206ENST00000610556 MBIPQ9NS73 344 aa8.4□□□□□ -1.07
SYNPO2-206ENST00000610556 CD109Q6YHK3 1445 aa8.4□□□□□ -1.07
SYNPO2-206ENST00000610556 NPC1L1Q9UHC9 1359 aa8.39□□□□□ -1.07
SYNPO2-206ENST00000610556 NUCB1Q02818 461 aa8.39□□□□□ -1.07
SYNPO2-206ENST00000610556 A0A0G2JS52 829 aa8.39□□□□□ -1.07
SYNPO2-206ENST00000610556 NUDT16Q96DE0 195 aaKnown RBP8.39□□□□□ -1.07
SYNPO2-206ENST00000610556 ZBTB40Q9NUA8 1239 aa8.39□□□□□ -1.07
SYNPO2-206ENST00000610556 CCDC9Q9Y3X0 531 aaKnown RBP8.39□□□□□ -1.07
SYNPO2-206ENST00000610556 EID1Q9Y6B2 187 aa8.39□□□□□ -1.07
SYNPO2-206ENST00000610556 ANKRD36BQ8N2N9 1353 aa8.39□□□□□ -1.07
SYNPO2-206ENST00000610556 KIAA2012Q0VF49 1180 aa8.39□□□□□ -1.07
SYNPO2-206ENST00000610556 DRC7Q8IY82 874 aa8.39□□□□□ -1.07
SYNPO2-206ENST00000610556 C16orf71Q8IYS4 520 aaPredicted RBP8.39□□□□□ -1.07
SYNPO2-206ENST00000610556 INSRP06213 1382 aa8.39□□□□□ -1.07
SYNPO2-206ENST00000610556 ABCC11Q96J66 1382 aa8.39□□□□□ -1.07
SYNPO2-206ENST00000610556 KRT24Q2M2I5 525 aa8.38□□□□□ -1.07
SYNPO2-206ENST00000610556 BMP2KLQ5H9B9 411 aa8.38□□□□□ -1.07
SYNPO2-206ENST00000610556 TSHZ3Q63HK5 1081 aa8.38□□□□□ -1.07
SYNPO2-206ENST00000610556 C8orf58Q8NAV2 365 aa8.38□□□□□ -1.07
SYNPO2-206ENST00000610556 SLC26A8Q96RN1 970 aa8.38□□□□□ -1.07
SYNPO2-206ENST00000610556 FAM13BQ9NYF5 915 aa8.38□□□□□ -1.07
SYNPO2-206ENST00000610556 TRIM35Q9UPQ4 493 aa8.38□□□□□ -1.07
SYNPO2-206ENST00000610556 KDM5DQ9BY66 1539 aa8.38□□□□□ -1.07
SYNPO2-206ENST00000610556 MAP4K4O95819 1239 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms