RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 TIMELESSQ9UNS1 1208 aa18.94■□□□□ 0.62
SENP3-209ENST00000610454 SBNO2Q9Y2G9 1366 aa18.93■□□□□ 0.62
SENP3-209ENST00000610454 FNBP4Q8N3X1 1017 aaPredicted RBP18.93■□□□□ 0.62
SENP3-209ENST00000610454 TRPC5Q9UL62 973 aaPredicted RBP18.93■□□□□ 0.62
SENP3-209ENST00000610454 RBM6P78332 1123 aaKnown RBP18.92■□□□□ 0.62
SENP3-209ENST00000610454 ATAD2Q6PL18 1390 aa18.92■□□□□ 0.62
SENP3-209ENST00000610454 CABP1Q9NZU7 370 aa18.91■□□□□ 0.62
SENP3-209ENST00000610454 CDK12Q9NYV4 1490 aaPredicted RBP18.9■□□□□ 0.62
SENP3-209ENST00000610454 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.89■□□□□ 0.61
SENP3-209ENST00000610454 PLCH1Q4KWH8 1693 aa18.89■□□□□ 0.61
SENP3-209ENST00000610454 ABTB2Q8N961 1025 aa18.88■□□□□ 0.61
SENP3-209ENST00000610454 BRD4O60885 1362 aaPredicted RBP18.88■□□□□ 0.61
SENP3-209ENST00000610454 SLC24A1O60721 1099 aa18.87■□□□□ 0.61
SENP3-209ENST00000610454 ATRNO75882 1429 aa18.87■□□□□ 0.61
SENP3-209ENST00000610454 SLIT2O94813 1529 aa18.87■□□□□ 0.61
SENP3-209ENST00000610454 NUTM2GQ5VZR2 741 aa18.87■□□□□ 0.61
SENP3-209ENST00000610454 BCL9LQ86UU0 1499 aa18.87■□□□□ 0.61
SENP3-209ENST00000610454 UNC5CLQ8IV45 518 aa18.87■□□□□ 0.61
SENP3-209ENST00000610454 NWD2Q9ULI1 1742 aa18.87■□□□□ 0.61
SENP3-209ENST00000610454 CRYBG1Q9Y4K1 1723 aa18.87■□□□□ 0.61
SENP3-209ENST00000610454 PHRF1Q9P1Y6 1649 aaKnown RBP18.86■□□□□ 0.61
SENP3-209ENST00000610454 USP6P35125 1406 aa18.86■□□□□ 0.61
SENP3-209ENST00000610454 COL14A1Q05707 1796 aaKnown RBP18.85■□□□□ 0.61
SENP3-209ENST00000610454 AKAP12Q02952 1782 aa18.84■□□□□ 0.61
SENP3-209ENST00000610454 ST20-MTHFSA0A0A6YYL1 179 aa18.84■□□□□ 0.61
SENP3-209ENST00000610454 ZNF692Q9BU19 519 aaPredicted RBP18.84■□□□□ 0.61
SENP3-209ENST00000610454 RGS12O14924 1447 aa18.83■□□□□ 0.61
SENP3-209ENST00000610454 USP47Q96K76 1375 aa18.83■□□□□ 0.61
SENP3-209ENST00000610454 NLRP13Q86W25 1043 aa18.83■□□□□ 0.6
SENP3-209ENST00000610454 TMC1Q8TDI8 760 aa18.83■□□□□ 0.6
SENP3-209ENST00000610454 PRDM11Q9NQV5 511 aa18.83■□□□□ 0.6
SENP3-209ENST00000610454 CCDC9Q9Y3X0 531 aaKnown RBP18.83■□□□□ 0.6
SENP3-209ENST00000610454 FAM83GA6ND36 823 aa18.82■□□□□ 0.6
SENP3-209ENST00000610454 GJD4Q96KN9 370 aaPredicted RBP18.82■□□□□ 0.6
SENP3-209ENST00000610454 KTN1Q86UP2 1357 aaKnown RBP18.81■□□□□ 0.6
SENP3-209ENST00000610454 BTG4Q9NY30 223 aa18.8■□□□□ 0.6
SENP3-209ENST00000610454 NLRP6P59044 892 aa18.79■□□□□ 0.6
SENP3-209ENST00000610454 ZC3H6P61129 1189 aaKnown RBP18.79■□□□□ 0.6
SENP3-209ENST00000610454 HDGFL2Q7Z4V5 671 aaPredicted RBP18.79■□□□□ 0.6
SENP3-209ENST00000610454 PUS7Q96PZ0 661 aaKnown RBP18.79■□□□□ 0.6
SENP3-209ENST00000610454 NRKQ7Z2Y5 1582 aa18.79■□□□□ 0.6
SENP3-209ENST00000610454 KIAA0232Q92628 1395 aa18.79■□□□□ 0.6
SENP3-209ENST00000610454 MON2Q7Z3U7 1717 aa18.78■□□□□ 0.6
SENP3-209ENST00000610454 NRAPQ86VF7 1730 aa18.78■□□□□ 0.6
SENP3-209ENST00000610454 VPS72Q15906 364 aa18.78■□□□□ 0.6
SENP3-209ENST00000610454 TESK2Q96S53 571 aa18.78■□□□□ 0.6
SENP3-209ENST00000610454 USP19O94966 1318 aa18.77■□□□□ 0.6
SENP3-209ENST00000610454 TTC21AQ8NDW8 1320 aa18.77■□□□□ 0.6
SENP3-209ENST00000610454 CPSF1Q10570 1443 aaKnown RBP18.77■□□□□ 0.6
SENP3-209ENST00000610454 PIK3C2AO00443 1686 aa18.77■□□□□ 0.6
SENP3-209ENST00000610454 TMF1P82094 1093 aa18.77■□□□□ 0.6
SENP3-209ENST00000610454 TERF2IPQ9NYB0 399 aa18.77■□□□□ 0.6
SENP3-209ENST00000610454 TTC21BQ7Z4L5 1316 aa18.76■□□□□ 0.59
SENP3-209ENST00000610454 CHRNA2Q15822 529 aa18.76■□□□□ 0.59
SENP3-209ENST00000610454 NINLQ9Y2I6 1382 aa18.76■□□□□ 0.59
SENP3-209ENST00000610454 GLI3P10071 1580 aa18.76■□□□□ 0.59
SENP3-209ENST00000610454 SSH2Q76I76 1423 aa18.75■□□□□ 0.59
SENP3-209ENST00000610454 A0A0G2JS52 829 aa18.74■□□□□ 0.59
SENP3-209ENST00000610454 GCP02774 474 aa18.74■□□□□ 0.59
SENP3-209ENST00000610454 MYT1Q01538 1121 aa18.74■□□□□ 0.59
SENP3-209ENST00000610454 CDCA8Q53HL2 280 aa18.74■□□□□ 0.59
SENP3-209ENST00000610454 SLC12A5Q9H2X9 1139 aa18.74■□□□□ 0.59
SENP3-209ENST00000610454 CPDO75976 1380 aa18.73■□□□□ 0.59
SENP3-209ENST00000610454 ZBTB7CA1YPR0 619 aa18.73■□□□□ 0.59
SENP3-209ENST00000610454 EVA1CP58658 441 aa18.72■□□□□ 0.59
SENP3-209ENST00000610454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.72■□□□□ 0.59
SENP3-209ENST00000610454 STRN4Q9NRL3 753 aa18.72■□□□□ 0.59
SENP3-209ENST00000610454 SLIT3O75094 1523 aa18.72■□□□□ 0.59
SENP3-209ENST00000610454 KCNH5Q8NCM2 988 aa18.71■□□□□ 0.59
SENP3-209ENST00000610454 EDC4Q6P2E9 1401 aaKnown RBP18.71■□□□□ 0.59
SENP3-209ENST00000610454 CD163L1Q9NR16 1453 aa18.71■□□□□ 0.59
SENP3-209ENST00000610454 A0A1W2PP64 1363 aa18.7■□□□□ 0.58
SENP3-209ENST00000610454 UPF1Q92900 1129 aaKnown RBP eCLIP18.7■□□□□ 0.58
SENP3-209ENST00000610454 SOX12O15370 315 aa18.69■□□□□ 0.58
SENP3-209ENST00000610454 SEPT12Q8IYM1 358 aa18.68■□□□□ 0.58
SENP3-209ENST00000610454 SPATA31A5Q5VU36 1347 aa18.68■□□□□ 0.58
SENP3-209ENST00000610454 SPATA31A7Q8IWB4 1347 aa18.68■□□□□ 0.58
SENP3-209ENST00000610454 LMO7Q8WWI1 1683 aa18.67■□□□□ 0.58
SENP3-209ENST00000610454 FAM98CQ17RN3 349 aaKnown RBP18.67■□□□□ 0.58
SENP3-209ENST00000610454 BRWD3Q6RI45 1802 aa18.67■□□□□ 0.58
SENP3-209ENST00000610454 EIF4G2P78344 907 aaKnown RBP eCLIP18.66■□□□□ 0.58
SENP3-209ENST00000610454 CAMTA1Q9Y6Y1 1673 aa18.66■□□□□ 0.58
SENP3-209ENST00000610454 ANKRD36BQ8N2N9 1353 aa18.66■□□□□ 0.58
SENP3-209ENST00000610454 NME9Q86XW9 330 aa18.65■□□□□ 0.58
SENP3-209ENST00000610454 USP54Q70EL1 1684 aa18.65■□□□□ 0.58
SENP3-209ENST00000610454 AATKQ6ZMQ8 1374 aa18.65■□□□□ 0.58
SENP3-209ENST00000610454 EP400Q96L91 3159 aa18.64■□□□□ 0.57
SENP3-209ENST00000610454 ONECUT3O60422 494 aaPredicted RBP18.64■□□□□ 0.57
SENP3-209ENST00000610454 USP35Q9P2H5 1018 aa18.64■□□□□ 0.57
SENP3-209ENST00000610454 SPATA31A1Q5TZJ5 1347 aa18.64■□□□□ 0.57
SENP3-209ENST00000610454 USP31Q70CQ4 1352 aa18.64■□□□□ 0.57
SENP3-209ENST00000610454 COL5A2P05997 1499 aaPredicted RBP18.63■□□□□ 0.57
SENP3-209ENST00000610454 KRT27Q7Z3Y8 459 aa18.62■□□□□ 0.57
SENP3-209ENST00000610454 NFAT5O94916 1531 aa18.62■□□□□ 0.57
SENP3-209ENST00000610454 LARP1Q6PKG0 1096 aaKnown RBP18.61■□□□□ 0.57
SENP3-209ENST00000610454 ARHGEF25Q86VW2 580 aa18.61■□□□□ 0.57
SENP3-209ENST00000610454 POLR3GLQ9BT43 218 aa18.61■□□□□ 0.57
SENP3-209ENST00000610454 ZRANB1Q9UGI0 708 aa18.61■□□□□ 0.57
SENP3-209ENST00000610454 HSPA5P11021 654 aaKnown RBP18.6■□□□□ 0.57
SENP3-209ENST00000610454 LTN1O94822 1766 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms