RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 FANCIQ9NVI1 1328 aa15.58■□□□□ 0.08
USP6NL-206ENST00000609853 MON2Q7Z3U7 1717 aa15.58■□□□□ 0.08
USP6NL-206ENST00000609853 PLIN1O60240 522 aa15.57■□□□□ 0.08
USP6NL-206ENST00000609853 ZNF692Q9BU19 519 aaPredicted RBP15.57■□□□□ 0.08
USP6NL-206ENST00000609853 AKAP12Q02952 1782 aa15.57■□□□□ 0.08
USP6NL-206ENST00000609853 CRBNQ96SW2 442 aa15.57■□□□□ 0.08
USP6NL-206ENST00000609853 SPINK5Q9NQ38 1064 aaPredicted RBP15.57■□□□□ 0.08
USP6NL-206ENST00000609853 ITSN1Q15811 1721 aa15.56■□□□□ 0.08
USP6NL-206ENST00000609853 NUDT16Q96DE0 195 aaKnown RBP15.56■□□□□ 0.08
USP6NL-206ENST00000609853 DIP2AQ14689 1571 aa15.56■□□□□ 0.08
USP6NL-206ENST00000609853 DIAPH1O60610 1272 aaKnown RBP15.55■□□□□ 0.08
USP6NL-206ENST00000609853 AATKQ6ZMQ8 1374 aa15.54■□□□□ 0.08
USP6NL-206ENST00000609853 THEMISQ8N1K5 641 aaPredicted RBP15.54■□□□□ 0.08
USP6NL-206ENST00000609853 MYH16Q9H6N6 1097 aa15.54■□□□□ 0.08
USP6NL-206ENST00000609853 MAP2P11137 1827 aaKnown RBP15.54■□□□□ 0.08
USP6NL-206ENST00000609853 LTKP29376 864 aa15.54■□□□□ 0.08
USP6NL-206ENST00000609853 TBX22Q9Y458 520 aa15.54■□□□□ 0.08
USP6NL-206ENST00000609853 ROBO2Q9HCK4 1378 aa15.53■□□□□ 0.08
USP6NL-206ENST00000609853 TCERG1O14776 1098 aaKnown RBP15.53■□□□□ 0.08
USP6NL-206ENST00000609853 CT47B1P0C2W7 299 aaPredicted RBP15.53■□□□□ 0.08
USP6NL-206ENST00000609853 PDE3AQ14432 1141 aa15.53■□□□□ 0.08
USP6NL-206ENST00000609853 PLEKHF1Q96S99 279 aa15.53■□□□□ 0.08
USP6NL-206ENST00000609853 MAPK8IP3Q9UPT6 1336 aa15.53■□□□□ 0.08
USP6NL-206ENST00000609853 DMRT2Q9Y5R5 561 aa15.52■□□□□ 0.08
USP6NL-206ENST00000609853 U2SURPO15042 1029 aaKnown RBP15.51■□□□□ 0.07
USP6NL-206ENST00000609853 FCHSD2O94868 740 aa15.51■□□□□ 0.07
USP6NL-206ENST00000609853 NEUROD2Q15784 382 aa15.51■□□□□ 0.07
USP6NL-206ENST00000609853 IL16Q14005 1332 aa15.51■□□□□ 0.07
USP6NL-206ENST00000609853 TOPAZ1Q8N9V7 1692 aa15.51■□□□□ 0.07
USP6NL-206ENST00000609853 PTCH1Q13635 1447 aa15.51■□□□□ 0.07
USP6NL-206ENST00000609853 MS4A1P11836 297 aa15.51■□□□□ 0.07
USP6NL-206ENST00000609853 CEBPAP49715 358 aaPredicted RBP15.51■□□□□ 0.07
USP6NL-206ENST00000609853 AAMPQ13685 434 aa15.51■□□□□ 0.07
USP6NL-206ENST00000609853 C20orf194Q5TEA3 1177 aa15.51■□□□□ 0.07
USP6NL-206ENST00000609853 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.51■□□□□ 0.07
USP6NL-206ENST00000609853 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.5■□□□□ 0.07
USP6NL-206ENST00000609853 CDK12Q9NYV4 1490 aaPredicted RBP15.5■□□□□ 0.07
USP6NL-206ENST00000609853 POLKQ9UBT6 870 aa15.5■□□□□ 0.07
USP6NL-206ENST00000609853 RRP7AQ9Y3A4 280 aaKnown RBP15.5■□□□□ 0.07
USP6NL-206ENST00000609853 TMPOP42166 694 aaKnown RBP15.49■□□□□ 0.07
USP6NL-206ENST00000609853 PLEKHG3A1L390 1219 aa15.48■□□□□ 0.07
USP6NL-206ENST00000609853 NEFMP07197 916 aa15.48■□□□□ 0.07
USP6NL-206ENST00000609853 CENPQQ7L2Z9 268 aaPredicted RBP15.48■□□□□ 0.07
USP6NL-206ENST00000609853 COG3Q96JB2 828 aa15.48■□□□□ 0.07
USP6NL-206ENST00000609853 PIK3R4Q99570 1358 aa15.48■□□□□ 0.07
USP6NL-206ENST00000609853 BCAR3O75815 825 aa15.47■□□□□ 0.07
USP6NL-206ENST00000609853 RARSP54136 660 aaKnown RBP15.46■□□□□ 0.07
USP6NL-206ENST00000609853 KDM2BQ8NHM5 1336 aa15.46■□□□□ 0.07
USP6NL-206ENST00000609853 PRR36Q9H6K5 1346 aa15.46■□□□□ 0.07
USP6NL-206ENST00000609853 PTPRUQ92729 1446 aa15.46■□□□□ 0.07
USP6NL-206ENST00000609853 NRKQ7Z2Y5 1582 aa15.46■□□□□ 0.06
USP6NL-206ENST00000609853 NME9Q86XW9 330 aa15.45■□□□□ 0.06
USP6NL-206ENST00000609853 AMOTL2Q9Y2J4 779 aa15.45■□□□□ 0.06
USP6NL-206ENST00000609853 CANXP27824 592 aaKnown RBP15.44■□□□□ 0.06
USP6NL-206ENST00000609853 SLC26A8Q96RN1 970 aa15.44■□□□□ 0.06
USP6NL-206ENST00000609853 TRIM35Q9UPQ4 493 aa15.44■□□□□ 0.06
USP6NL-206ENST00000609853 XRN1Q8IZH2 1706 aaKnown RBP15.44■□□□□ 0.06
USP6NL-206ENST00000609853 RIMS1Q86UR5 1692 aaKnown RBP15.44■□□□□ 0.06
USP6NL-206ENST00000609853 CEP170BQ9Y4F5 1589 aaPredicted RBP15.44■□□□□ 0.06
USP6NL-206ENST00000609853 LRRC7Q96NW7 1537 aa15.44■□□□□ 0.06
USP6NL-206ENST00000609853 RSPH6AQ9H0K4 717 aa15.43■□□□□ 0.06
USP6NL-206ENST00000609853 RIPK4P57078 832 aa15.43■□□□□ 0.06
USP6NL-206ENST00000609853 CALD1Q05682 793 aaKnown RBP15.43■□□□□ 0.06
USP6NL-206ENST00000609853 TTC21BQ7Z4L5 1316 aa15.42■□□□□ 0.06
USP6NL-206ENST00000609853 USP6P35125 1406 aa15.42■□□□□ 0.06
USP6NL-206ENST00000609853 ACEP12821 1306 aa15.41■□□□□ 0.06
USP6NL-206ENST00000609853 NALCNQ8IZF0 1738 aa15.41■□□□□ 0.06
USP6NL-206ENST00000609853 PPM1GO15355 546 aaPredicted RBP15.41■□□□□ 0.06
USP6NL-206ENST00000609853 IL13P35225 146 aa15.41■□□□□ 0.06
USP6NL-206ENST00000609853 MYT1Q01538 1121 aa15.41■□□□□ 0.06
USP6NL-206ENST00000609853 SETD1BQ9UPS6 1966 aaKnown RBP15.41■□□□□ 0.06
USP6NL-206ENST00000609853 TTC21AQ8NDW8 1320 aa15.41■□□□□ 0.06
USP6NL-206ENST00000609853 ZNF142P52746 1687 aaPredicted RBP15.4■□□□□ 0.06
USP6NL-206ENST00000609853 NCKAP5LQ9HCH0 1330 aa15.4■□□□□ 0.06
USP6NL-206ENST00000609853 PRKAR2BP31323 418 aa15.4■□□□□ 0.06
USP6NL-206ENST00000609853 ZNF428Q96B54 188 aa15.4■□□□□ 0.06
USP6NL-206ENST00000609853 EMILIN1Q9Y6C2 1016 aa15.4■□□□□ 0.06
USP6NL-206ENST00000609853 OVOS2A0A0J9YW53 1432 aa15.4■□□□□ 0.06
USP6NL-206ENST00000609853 OVOS2Q6IE36 1432 aa15.4■□□□□ 0.06
USP6NL-206ENST00000609853 ANKARQ7Z5J8 1434 aa15.4■□□□□ 0.06
USP6NL-206ENST00000609853 SSH2Q76I76 1423 aa15.39■□□□□ 0.05
USP6NL-206ENST00000609853 NFE2L2Q16236 605 aa15.39■□□□□ 0.05
USP6NL-206ENST00000609853 LMOD3Q0VAK6 560 aa15.38■□□□□ 0.05
USP6NL-206ENST00000609853 USP31Q70CQ4 1352 aa15.38■□□□□ 0.05
USP6NL-206ENST00000609853 CLUAP1Q96AJ1 413 aa15.37■□□□□ 0.05
USP6NL-206ENST00000609853 FRAT1Q92837 279 aaPredicted RBP15.37■□□□□ 0.05
USP6NL-206ENST00000609853 ZRANB1Q9UGI0 708 aa15.37■□□□□ 0.05
USP6NL-206ENST00000609853 ADAMTSL3P82987 1691 aa15.36■□□□□ 0.05
USP6NL-206ENST00000609853 PDE4AP27815 886 aa15.36■□□□□ 0.05
USP6NL-206ENST00000609853 ANP32AP39687 249 aaKnown RBP15.36■□□□□ 0.05
USP6NL-206ENST00000609853 ZKSCAN2Q63HK3 967 aa15.36■□□□□ 0.05
USP6NL-206ENST00000609853 BACH2Q9BYV9 841 aa15.36■□□□□ 0.05
USP6NL-206ENST00000609853 EXOSC9Q06265 439 aaKnown RBP15.35■□□□□ 0.05
USP6NL-206ENST00000609853 ANKLE2Q86XL3 938 aa15.35■□□□□ 0.05
USP6NL-206ENST00000609853 KDM4FA0A1W2PPD8 638 aa15.34■□□□□ 0.05
USP6NL-206ENST00000609853 FBLN1P23142 703 aa15.34■□□□□ 0.05
USP6NL-206ENST00000609853 ALDH1L2Q3SY69 923 aa15.34■□□□□ 0.05
USP6NL-206ENST00000609853 PMFBP1Q8TBY8 1022 aa15.34■□□□□ 0.05
USP6NL-206ENST00000609853 PANK1Q8TE04 598 aa15.34■□□□□ 0.05
USP6NL-206ENST00000609853 CHD2O14647 1828 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms