RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 EN1Q05925 392 aaPredicted RBP23.14■■□□□ 1.29
HDDC2-210ENST00000609574 HRCP23327 699 aa23.12■■□□□ 1.29
HDDC2-210ENST00000609574 EVA1CP58658 441 aa23.11■■□□□ 1.29
HDDC2-210ENST00000609574 PRR36Q9H6K5 1346 aa23.1■■□□□ 1.29
HDDC2-210ENST00000609574 FAM182BQ5T319 152 aa23.09■■□□□ 1.29
HDDC2-210ENST00000609574 FAM196AQ6ZSG2 479 aa23.09■■□□□ 1.29
HDDC2-210ENST00000609574 NUDT16Q96DE0 195 aaKnown RBP23.09■■□□□ 1.29
HDDC2-210ENST00000609574 STRN4Q9NRL3 753 aa23.09■■□□□ 1.29
HDDC2-210ENST00000609574 ADGRB2O60241 1585 aa23.09■■□□□ 1.29
HDDC2-210ENST00000609574 RAB3GAP2Q9H2M9 1393 aa23.08■■□□□ 1.29
HDDC2-210ENST00000609574 COL14A1Q05707 1796 aaKnown RBP23.08■■□□□ 1.29
HDDC2-210ENST00000609574 TULP4Q9NRJ4 1543 aa23.08■■□□□ 1.28
HDDC2-210ENST00000609574 R3HDM1Q15032 1099 aaKnown RBP23.07■■□□□ 1.28
HDDC2-210ENST00000609574 PDE3BQ13370 1112 aa23.06■■□□□ 1.28
HDDC2-210ENST00000609574 ABCA3Q99758 1704 aa23.05■■□□□ 1.28
HDDC2-210ENST00000609574 ZC3H6P61129 1189 aaKnown RBP23.05■■□□□ 1.28
HDDC2-210ENST00000609574 ADGRB1O14514 1584 aa23.05■■□□□ 1.28
HDDC2-210ENST00000609574 SPATA31A1Q5TZJ5 1347 aa23.05■■□□□ 1.28
HDDC2-210ENST00000609574 CHRNA2Q15822 529 aa23.04■■□□□ 1.28
HDDC2-210ENST00000609574 CDK19Q9BWU1 502 aa23.04■■□□□ 1.28
HDDC2-210ENST00000609574 KIAA0232Q92628 1395 aa23.03■■□□□ 1.28
HDDC2-210ENST00000609574 TRIM37O94972 964 aa23.03■■□□□ 1.28
HDDC2-210ENST00000609574 APBA3O96018 575 aa23.03■■□□□ 1.28
HDDC2-210ENST00000609574 USP35Q9P2H5 1018 aa23.03■■□□□ 1.28
HDDC2-210ENST00000609574 EZH2Q15910 746 aaKnown RBP23.02■■□□□ 1.28
HDDC2-210ENST00000609574 NUTM2GQ5VZR2 741 aa23.02■■□□□ 1.28
HDDC2-210ENST00000609574 LRP5O75197 1615 aa23.01■■□□□ 1.27
HDDC2-210ENST00000609574 CCDC61Q9Y6R9 512 aa23.01■■□□□ 1.27
HDDC2-210ENST00000609574 TRPM3Q9HCF6 1732 aaPredicted RBP23.01■■□□□ 1.27
HDDC2-210ENST00000609574 NRAPQ86VF7 1730 aa23■■□□□ 1.27
HDDC2-210ENST00000609574 NBPF8Q3BBV2 869 aa23■■□□□ 1.27
HDDC2-210ENST00000609574 ABTB2Q8N961 1025 aa23■■□□□ 1.27
HDDC2-210ENST00000609574 ALS2Q96Q42 1657 aa23■■□□□ 1.27
HDDC2-210ENST00000609574 NBPF14Q5TI25 921 aa22.99■■□□□ 1.27
HDDC2-210ENST00000609574 ACEP12821 1306 aa22.98■■□□□ 1.27
HDDC2-210ENST00000609574 DISP2A7MBM2 1401 aa22.98■■□□□ 1.27
HDDC2-210ENST00000609574 RGPD1P0DJD0 1748 aa22.97■■□□□ 1.27
HDDC2-210ENST00000609574 BARGINQ6ZT62 677 aa22.97■■□□□ 1.27
HDDC2-210ENST00000609574 CAMKK2Q96RR4 588 aa22.97■■□□□ 1.27
HDDC2-210ENST00000609574 ATP7BP35670 1465 aa22.97■■□□□ 1.27
HDDC2-210ENST00000609574 PARD3Q8TEW0 1356 aa22.96■■□□□ 1.27
HDDC2-210ENST00000609574 PLEKHG3A1L390 1219 aa22.95■■□□□ 1.26
HDDC2-210ENST00000609574 C11orf95C9JLR9 678 aaPredicted RBP22.95■■□□□ 1.26
HDDC2-210ENST00000609574 NLRP13Q86W25 1043 aa22.95■■□□□ 1.26
HDDC2-210ENST00000609574 TCP11L2Q8N4U5 519 aa22.95■■□□□ 1.26
HDDC2-210ENST00000609574 THRAP3Q9Y2W1 955 aaKnown RBP22.93■■□□□ 1.26
HDDC2-210ENST00000609574 SRPK2P78362 688 aaKnown RBP22.92■■□□□ 1.26
HDDC2-210ENST00000609574 POLR3AO14802 1390 aaPredicted RBP22.91■■□□□ 1.26
HDDC2-210ENST00000609574 DCAF8L1A6NGE4 600 aa22.91■■□□□ 1.26
HDDC2-210ENST00000609574 LARP1Q6PKG0 1096 aaKnown RBP22.91■■□□□ 1.26
HDDC2-210ENST00000609574 THSD7AQ9UPZ6 1657 aa22.9■■□□□ 1.26
HDDC2-210ENST00000609574 SSH2Q76I76 1423 aa22.9■■□□□ 1.26
HDDC2-210ENST00000609574 ITSN1Q15811 1721 aa22.89■■□□□ 1.26
HDDC2-210ENST00000609574 ZBTB7CA1YPR0 619 aa22.88■■□□□ 1.25
HDDC2-210ENST00000609574 GCP02774 474 aa22.88■■□□□ 1.25
HDDC2-210ENST00000609574 PPP1R1BQ9UD71 204 aaPredicted RBP22.87■■□□□ 1.25
HDDC2-210ENST00000609574 CPDO75976 1380 aa22.87■■□□□ 1.25
HDDC2-210ENST00000609574 BRD4O60885 1362 aaPredicted RBP22.84■■□□□ 1.25
HDDC2-210ENST00000609574 USP19O94966 1318 aa22.83■■□□□ 1.25
HDDC2-210ENST00000609574 CRYBG1Q9Y4K1 1723 aa22.83■■□□□ 1.25
HDDC2-210ENST00000609574 SPON1Q9HCB6 807 aa22.83■■□□□ 1.25
HDDC2-210ENST00000609574 CENPJQ9HC77 1338 aaPredicted RBP22.82■■□□□ 1.24
HDDC2-210ENST00000609574 NLRP6P59044 892 aa22.82■■□□□ 1.24
HDDC2-210ENST00000609574 CABP2Q9NPB3 220 aa22.82■■□□□ 1.24
HDDC2-210ENST00000609574 ARHGEF28Q8N1W1 1705 aaKnown RBP22.82■■□□□ 1.24
HDDC2-210ENST00000609574 NBPF1Q3BBV0 1214 aa22.81■■□□□ 1.24
HDDC2-210ENST00000609574 PHRF1Q9P1Y6 1649 aaKnown RBP22.81■■□□□ 1.24
HDDC2-210ENST00000609574 PPIP5K1Q6PFW1 1433 aa22.81■■□□□ 1.24
HDDC2-210ENST00000609574 TNS1Q9HBL0 1735 aaKnown RBP22.8■■□□□ 1.24
HDDC2-210ENST00000609574 CAMTA1Q9Y6Y1 1673 aa22.8■■□□□ 1.24
HDDC2-210ENST00000609574 DDB1Q16531 1140 aa22.79■■□□□ 1.24
HDDC2-210ENST00000609574 TOM1L2Q6ZVM7 507 aa22.79■■□□□ 1.24
HDDC2-210ENST00000609574 KCNQ2O43526 872 aa22.78■■□□□ 1.24
HDDC2-210ENST00000609574 YY1P25490 414 aa22.78■■□□□ 1.24
HDDC2-210ENST00000609574 CABP1Q9NZU7 370 aa22.78■■□□□ 1.24
HDDC2-210ENST00000609574 CRB1P82279 1406 aa22.77■■□□□ 1.24
HDDC2-210ENST00000609574 CDCA7Q9BWT1 371 aaPredicted RBP22.75■■□□□ 1.23
HDDC2-210ENST00000609574 PLSCR1O15162 318 aa22.74■■□□□ 1.23
HDDC2-210ENST00000609574 NRKQ7Z2Y5 1582 aa22.74■■□□□ 1.23
HDDC2-210ENST00000609574 AATKQ6ZMQ8 1374 aa22.74■■□□□ 1.23
HDDC2-210ENST00000609574 OVOS2A0A0G2JMS6 1433 aa22.74■■□□□ 1.23
HDDC2-210ENST00000609574 OVOS2A0A0J9YW53 1432 aa22.74■■□□□ 1.23
HDDC2-210ENST00000609574 OVOS2Q6IE36 1432 aa22.74■■□□□ 1.23
HDDC2-210ENST00000609574 COL5A2P05997 1499 aaPredicted RBP22.73■■□□□ 1.23
HDDC2-210ENST00000609574 BCL11BQ9C0K0 894 aaPredicted RBP22.73■■□□□ 1.23
HDDC2-210ENST00000609574 EVC2Q86UK5 1308 aa22.73■■□□□ 1.23
HDDC2-210ENST00000609574 CSB-PGBD3P0DP91 1061 aa22.72■■□□□ 1.23
HDDC2-210ENST00000609574 KCNH5Q8NCM2 988 aa22.72■■□□□ 1.23
HDDC2-210ENST00000609574 ZNF692Q9BU19 519 aaPredicted RBP22.72■■□□□ 1.23
HDDC2-210ENST00000609574 TOPAZ1Q8N9V7 1692 aa22.71■■□□□ 1.23
HDDC2-210ENST00000609574 KIAA1210Q9ULL0 1709 aa22.71■■□□□ 1.23
HDDC2-210ENST00000609574 USP6P35125 1406 aa22.69■■□□□ 1.22
HDDC2-210ENST00000609574 WDR17Q8IZU2 1322 aa22.68■■□□□ 1.22
HDDC2-210ENST00000609574 LMO7Q8WWI1 1683 aa22.68■■□□□ 1.22
HDDC2-210ENST00000609574 NINLQ9Y2I6 1382 aa22.67■■□□□ 1.22
HDDC2-210ENST00000609574 EXOC5O00471 708 aa22.67■■□□□ 1.22
HDDC2-210ENST00000609574 SOX12O15370 315 aa22.65■■□□□ 1.22
HDDC2-210ENST00000609574 RREB1Q92766 1687 aa22.65■■□□□ 1.22
HDDC2-210ENST00000609574 CARD10Q9BWT7 1032 aa22.64■■□□□ 1.21
HDDC2-210ENST00000609574 STK32BQ9NY57 414 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms