RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 NWD2Q9ULI1 1742 aa20.36■□□□□ 0.85
PRDM16-210ENST00000607632 ATRNO75882 1429 aa20.36■□□□□ 0.85
PRDM16-210ENST00000607632 SSH2Q76I76 1423 aa20.35■□□□□ 0.85
PRDM16-210ENST00000607632 PHRF1Q9P1Y6 1649 aaKnown RBP20.35■□□□□ 0.85
PRDM16-210ENST00000607632 ATAD2Q6PL18 1390 aa20.34■□□□□ 0.85
PRDM16-210ENST00000607632 AKAP12Q02952 1782 aa20.34■□□□□ 0.85
PRDM16-210ENST00000607632 PLCH1Q4KWH8 1693 aa20.33■□□□□ 0.85
PRDM16-210ENST00000607632 CABLES1Q8TDN4 633 aa20.33■□□□□ 0.85
PRDM16-210ENST00000607632 USP21Q9UK80 565 aa20.33■□□□□ 0.85
PRDM16-210ENST00000607632 USP6P35125 1406 aa20.33■□□□□ 0.84
PRDM16-210ENST00000607632 RXRBP28702 533 aa20.32■□□□□ 0.84
PRDM16-210ENST00000607632 PUS7Q96PZ0 661 aaKnown RBP20.32■□□□□ 0.84
PRDM16-210ENST00000607632 TESK2Q96S53 571 aa20.32■□□□□ 0.84
PRDM16-210ENST00000607632 QTRT2Q9H974 415 aaKnown RBP20.32■□□□□ 0.84
PRDM16-210ENST00000607632 CABP1Q9NZU7 370 aa20.32■□□□□ 0.84
PRDM16-210ENST00000607632 NRKQ7Z2Y5 1582 aa20.31■□□□□ 0.84
PRDM16-210ENST00000607632 CPSF1Q10570 1443 aaKnown RBP20.31■□□□□ 0.84
PRDM16-210ENST00000607632 LMOD2Q6P5Q4 547 aa20.31■□□□□ 0.84
PRDM16-210ENST00000607632 RBM6P78332 1123 aaKnown RBP20.3■□□□□ 0.84
PRDM16-210ENST00000607632 TRPC5Q9UL62 973 aaPredicted RBP20.3■□□□□ 0.84
PRDM16-210ENST00000607632 COL14A1Q05707 1796 aaKnown RBP20.29■□□□□ 0.84
PRDM16-210ENST00000607632 PAK3O75914 559 aaPredicted RBP20.29■□□□□ 0.84
PRDM16-210ENST00000607632 MON2Q7Z3U7 1717 aa20.29■□□□□ 0.84
PRDM16-210ENST00000607632 NRAPQ86VF7 1730 aa20.29■□□□□ 0.84
PRDM16-210ENST00000607632 USP19O94966 1318 aa20.27■□□□□ 0.84
PRDM16-210ENST00000607632 RGS12O14924 1447 aa20.27■□□□□ 0.84
PRDM16-210ENST00000607632 CD163L1Q9NR16 1453 aa20.27■□□□□ 0.84
PRDM16-210ENST00000607632 USP47Q96K76 1375 aa20.27■□□□□ 0.84
PRDM16-210ENST00000607632 ST20-MTHFSA0A0A6YYL1 179 aa20.27■□□□□ 0.84
PRDM16-210ENST00000607632 SLC24A1O60721 1099 aa20.27■□□□□ 0.84
PRDM16-210ENST00000607632 CCER1Q8TC90 406 aaPredicted RBP20.27■□□□□ 0.84
PRDM16-210ENST00000607632 PIK3C2AO00443 1686 aa20.26■□□□□ 0.83
PRDM16-210ENST00000607632 HAP1P54257 671 aaPredicted RBP20.26■□□□□ 0.83
PRDM16-210ENST00000607632 UNC5CLQ8IV45 518 aa20.26■□□□□ 0.83
PRDM16-210ENST00000607632 ZNF692Q9BU19 519 aaPredicted RBP20.26■□□□□ 0.83
PRDM16-210ENST00000607632 FAM83GA6ND36 823 aa20.25■□□□□ 0.83
PRDM16-210ENST00000607632 GLI3P10071 1580 aa20.25■□□□□ 0.83
PRDM16-210ENST00000607632 SLIT3O75094 1523 aa20.24■□□□□ 0.83
PRDM16-210ENST00000607632 USP54Q70EL1 1684 aa20.23■□□□□ 0.83
PRDM16-210ENST00000607632 ABTB2Q8N961 1025 aa20.23■□□□□ 0.83
PRDM16-210ENST00000607632 CPDO75976 1380 aa20.21■□□□□ 0.83
PRDM16-210ENST00000607632 NINLQ9Y2I6 1382 aa20.21■□□□□ 0.83
PRDM16-210ENST00000607632 NLRP13Q86W25 1043 aa20.21■□□□□ 0.83
PRDM16-210ENST00000607632 GJD4Q96KN9 370 aaPredicted RBP20.21■□□□□ 0.83
PRDM16-210ENST00000607632 LMO7Q8WWI1 1683 aa20.2■□□□□ 0.82
PRDM16-210ENST00000607632 VPS72Q15906 364 aa20.2■□□□□ 0.82
PRDM16-210ENST00000607632 TTC21BQ7Z4L5 1316 aa20.2■□□□□ 0.82
PRDM16-210ENST00000607632 TTC21AQ8NDW8 1320 aa20.2■□□□□ 0.82
PRDM16-210ENST00000607632 KIAA0232Q92628 1395 aa20.2■□□□□ 0.82
PRDM16-210ENST00000607632 PLEKHG5O94827 1062 aa20.19■□□□□ 0.82
PRDM16-210ENST00000607632 KTN1Q86UP2 1357 aaKnown RBP20.19■□□□□ 0.82
PRDM16-210ENST00000607632 NUTM2GQ5VZR2 741 aa20.18■□□□□ 0.82
PRDM16-210ENST00000607632 GCP02774 474 aa20.16■□□□□ 0.82
PRDM16-210ENST00000607632 SLC12A5Q9H2X9 1139 aa20.16■□□□□ 0.82
PRDM16-210ENST00000607632 PRDM11Q9NQV5 511 aa20.16■□□□□ 0.82
PRDM16-210ENST00000607632 BTG4Q9NY30 223 aa20.16■□□□□ 0.82
PRDM16-210ENST00000607632 USP31Q70CQ4 1352 aa20.16■□□□□ 0.82
PRDM16-210ENST00000607632 EDC4Q6P2E9 1401 aaKnown RBP20.16■□□□□ 0.82
PRDM16-210ENST00000607632 ONECUT3O60422 494 aaPredicted RBP20.15■□□□□ 0.82
PRDM16-210ENST00000607632 A0A1W2PP64 1363 aa20.15■□□□□ 0.82
PRDM16-210ENST00000607632 NLRP6P59044 892 aa20.14■□□□□ 0.81
PRDM16-210ENST00000607632 TMF1P82094 1093 aa20.14■□□□□ 0.81
PRDM16-210ENST00000607632 COL18A1P39060 1754 aa20.13■□□□□ 0.81
PRDM16-210ENST00000607632 CAMTA1Q9Y6Y1 1673 aa20.13■□□□□ 0.81
PRDM16-210ENST00000607632 ZC3H6P61129 1189 aaKnown RBP20.13■□□□□ 0.81
PRDM16-210ENST00000607632 NFAT5O94916 1531 aa20.12■□□□□ 0.81
PRDM16-210ENST00000607632 HDGFL2Q7Z4V5 671 aaPredicted RBP20.12■□□□□ 0.81
PRDM16-210ENST00000607632 TERF2IPQ9NYB0 399 aa20.12■□□□□ 0.81
PRDM16-210ENST00000607632 MYOM1P52179 1685 aa20.11■□□□□ 0.81
PRDM16-210ENST00000607632 TMC1Q8TDI8 760 aa20.11■□□□□ 0.81
PRDM16-210ENST00000607632 ANKRD36BQ8N2N9 1353 aa20.1■□□□□ 0.81
PRDM16-210ENST00000607632 CHRNA2Q15822 529 aa20.1■□□□□ 0.81
PRDM16-210ENST00000607632 UPF1Q92900 1129 aaKnown RBP eCLIP20.1■□□□□ 0.81
PRDM16-210ENST00000607632 BRWD3Q6RI45 1802 aa20.1■□□□□ 0.81
PRDM16-210ENST00000607632 THSD7AQ9UPZ6 1657 aa20.1■□□□□ 0.81
PRDM16-210ENST00000607632 AATKQ6ZMQ8 1374 aa20.09■□□□□ 0.81
PRDM16-210ENST00000607632 SPATA31A5Q5VU36 1347 aa20.09■□□□□ 0.81
PRDM16-210ENST00000607632 SPATA31A7Q8IWB4 1347 aa20.09■□□□□ 0.81
PRDM16-210ENST00000607632 ABCC6O95255 1503 aa20.09■□□□□ 0.81
PRDM16-210ENST00000607632 CDCA8Q53HL2 280 aa20.09■□□□□ 0.81
PRDM16-210ENST00000607632 OVOS2A0A0J9YW53 1432 aa20.09■□□□□ 0.81
PRDM16-210ENST00000607632 OVOS2Q6IE36 1432 aa20.09■□□□□ 0.81
PRDM16-210ENST00000607632 COL5A2P05997 1499 aaPredicted RBP20.08■□□□□ 0.81
PRDM16-210ENST00000607632 KCNH5Q8NCM2 988 aa20.08■□□□□ 0.81
PRDM16-210ENST00000607632 ARHGEF25Q86VW2 580 aa20.06■□□□□ 0.8
PRDM16-210ENST00000607632 SPATA31A1Q5TZJ5 1347 aa20.05■□□□□ 0.8
PRDM16-210ENST00000607632 NME9Q86XW9 330 aa20.05■□□□□ 0.8
PRDM16-210ENST00000607632 EIF4G2P78344 907 aaKnown RBP eCLIP20.04■□□□□ 0.8
PRDM16-210ENST00000607632 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.04■□□□□ 0.8
PRDM16-210ENST00000607632 SEPT12Q8IYM1 358 aa20.04■□□□□ 0.8
PRDM16-210ENST00000607632 ZRANB1Q9UGI0 708 aa20.03■□□□□ 0.8
PRDM16-210ENST00000607632 CCDC9Q9Y3X0 531 aaKnown RBP20.03■□□□□ 0.8
PRDM16-210ENST00000607632 EP400Q96L91 3159 aa20.02■□□□□ 0.8
PRDM16-210ENST00000607632 RGPD5Q99666 1765 aa20.01■□□□□ 0.79
PRDM16-210ENST00000607632 HSPA5P11021 654 aaKnown RBP20.01■□□□□ 0.79
PRDM16-210ENST00000607632 LTN1O94822 1766 aa20■□□□□ 0.79
PRDM16-210ENST00000607632 FAM98CQ17RN3 349 aaKnown RBP20■□□□□ 0.79
PRDM16-210ENST00000607632 STRN4Q9NRL3 753 aa20■□□□□ 0.79
PRDM16-210ENST00000607632 CRB1P82279 1406 aa20■□□□□ 0.79
PRDM16-210ENST00000607632 LARP1Q6PKG0 1096 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms