RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 AAMPQ13685 434 aa19.09■□□□□ 0.65
RER1-209ENST00000605895 SCAF11Q99590 1463 aaKnown RBP19.08■□□□□ 0.65
RER1-209ENST00000605895 C16orf71Q8IYS4 520 aaPredicted RBP19.08■□□□□ 0.65
RER1-209ENST00000605895 THUMPD2Q9BTF0 503 aaKnown RBP19.08■□□□□ 0.64
RER1-209ENST00000605895 ATAD2Q6PL18 1390 aa19.07■□□□□ 0.64
RER1-209ENST00000605895 NGEFQ8N5V2 710 aa19.07■□□□□ 0.64
RER1-209ENST00000605895 SHANK2Q9UPX8 1470 aa19.07■□□□□ 0.64
RER1-209ENST00000605895 TMEM63CQ9P1W3 806 aa19.06■□□□□ 0.64
RER1-209ENST00000605895 ZKSCAN5Q9Y2L8 839 aa19.06■□□□□ 0.64
RER1-209ENST00000605895 MYO5CQ9NQX4 1742 aa19.06■□□□□ 0.64
RER1-209ENST00000605895 PLCB2Q00722 1185 aa19.06■□□□□ 0.64
RER1-209ENST00000605895 POLR3AO14802 1390 aaPredicted RBP19.06■□□□□ 0.64
RER1-209ENST00000605895 FBLN1P23142 703 aa19.05■□□□□ 0.64
RER1-209ENST00000605895 KIF16BQ96L93 1317 aa19.05■□□□□ 0.64
RER1-209ENST00000605895 GDPD2Q9HCC8 539 aa19.05■□□□□ 0.64
RER1-209ENST00000605895 SPDYE4A6NLX3 237 aa19.04■□□□□ 0.64
RER1-209ENST00000605895 BMP2KLQ5H9B9 411 aa19.04■□□□□ 0.64
RER1-209ENST00000605895 PHF23Q9BUL5 403 aaPredicted RBP19.04■□□□□ 0.64
RER1-209ENST00000605895 GGNBP2Q9H3C7 697 aa19.03■□□□□ 0.64
RER1-209ENST00000605895 MRC2Q9UBG0 1479 aa19.03■□□□□ 0.64
RER1-209ENST00000605895 SYCP2Q9BX26 1530 aa19.03■□□□□ 0.64
RER1-209ENST00000605895 TMPOP42166 694 aaKnown RBP19.03■□□□□ 0.64
RER1-209ENST00000605895 OTUD7AQ8TE49 926 aaPredicted RBP19.03■□□□□ 0.64
RER1-209ENST00000605895 DTNBO60941 627 aa19.02■□□□□ 0.64
RER1-209ENST00000605895 ZNF445P59923 1031 aa19.02■□□□□ 0.64
RER1-209ENST00000605895 TRIM35Q9UPQ4 493 aa19.02■□□□□ 0.64
RER1-209ENST00000605895 SYNMO15061 1565 aa19.02■□□□□ 0.63
RER1-209ENST00000605895 GRIN2AQ12879 1464 aa19.01■□□□□ 0.63
RER1-209ENST00000605895 NUP160Q12769 1436 aa19.01■□□□□ 0.63
RER1-209ENST00000605895 ZNF500O60304 480 aaPredicted RBP19.01■□□□□ 0.63
RER1-209ENST00000605895 AFAP1Q8N556 730 aa19.01■□□□□ 0.63
RER1-209ENST00000605895 NPC1L1Q9UHC9 1359 aa19.01■□□□□ 0.63
RER1-209ENST00000605895 PTMSP20962 102 aa19■□□□□ 0.63
RER1-209ENST00000605895 CARMIL2Q6F5E8 1435 aa19■□□□□ 0.63
RER1-209ENST00000605895 GSPT1P15170 499 aaKnown RBP19■□□□□ 0.63
RER1-209ENST00000605895 MAP7D2Q96T17 732 aa19■□□□□ 0.63
RER1-209ENST00000605895 SYNJ2O15056 1496 aa19■□□□□ 0.63
RER1-209ENST00000605895 SASS6Q6UVJ0 657 aa19■□□□□ 0.63
RER1-209ENST00000605895 EIF2AK4Q9P2K8 1649 aaKnown RBP19■□□□□ 0.63
RER1-209ENST00000605895 ERVK-7P63135 1459 aa18.99■□□□□ 0.63
RER1-209ENST00000605895 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.99■□□□□ 0.63
RER1-209ENST00000605895 ZMYM3Q14202 1370 aa18.99■□□□□ 0.63
RER1-209ENST00000605895 SMARCA5O60264 1052 aaPredicted RBP18.99■□□□□ 0.63
RER1-209ENST00000605895 SIRT2Q8IXJ6 389 aa18.99■□□□□ 0.63
RER1-209ENST00000605895 TTC12Q9H892 705 aaPredicted RBP18.99■□□□□ 0.63
RER1-209ENST00000605895 DYNC1I1O14576 645 aa18.98■□□□□ 0.63
RER1-209ENST00000605895 CABP2Q9NPB3 220 aa18.98■□□□□ 0.63
RER1-209ENST00000605895 ZDHHC9Q9Y397 364 aa18.98■□□□□ 0.63
RER1-209ENST00000605895 IPO8O15397 1037 aaKnown RBP18.98■□□□□ 0.63
RER1-209ENST00000605895 PDLIM2Q96JY6 352 aa18.98■□□□□ 0.63
RER1-209ENST00000605895 CDC45O75419 566 aa18.98■□□□□ 0.63
RER1-209ENST00000605895 TSPYL6Q8N831 410 aa18.98■□□□□ 0.63
RER1-209ENST00000605895 ARHGAP5Q13017 1502 aa18.97■□□□□ 0.63
RER1-209ENST00000605895 SAMD9LQ8IVG5 1584 aa18.96■□□□□ 0.63
RER1-209ENST00000605895 NUCB2P80303 420 aa18.96■□□□□ 0.63
RER1-209ENST00000605895 RSPH4AQ5TD94 716 aa18.96■□□□□ 0.63
RER1-209ENST00000605895 SMAP1Q8IYB5 467 aaPredicted RBP18.96■□□□□ 0.63
RER1-209ENST00000605895 CCDC39Q9UFE4 941 aa18.96■□□□□ 0.63
RER1-209ENST00000605895 PPP4R3BQ5MIZ7 849 aa18.95■□□□□ 0.62
RER1-209ENST00000605895 ATP2B3Q16720 1220 aa18.95■□□□□ 0.62
RER1-209ENST00000605895 CSPP1Q1MSJ5 1256 aa18.95■□□□□ 0.62
RER1-209ENST00000605895 CCDC27Q2M243 656 aa18.95■□□□□ 0.62
RER1-209ENST00000605895 LRSAM1Q6UWE0 723 aa18.95■□□□□ 0.62
RER1-209ENST00000605895 MYOM1P52179 1685 aa18.95■□□□□ 0.62
RER1-209ENST00000605895 PLXNC1O60486 1568 aa18.94■□□□□ 0.62
RER1-209ENST00000605895 PPIP5K1Q6PFW1 1433 aa18.94■□□□□ 0.62
RER1-209ENST00000605895 KIF3BO15066 747 aa18.94■□□□□ 0.62
RER1-209ENST00000605895 ZBTB7BO15156 539 aaPredicted RBP18.94■□□□□ 0.62
RER1-209ENST00000605895 CCDC94Q9BW85 323 aaPredicted RBP18.94■□□□□ 0.62
RER1-209ENST00000605895 USP25Q9UHP3 1055 aa18.94■□□□□ 0.62
RER1-209ENST00000605895 ZSCAN20P17040 1043 aaPredicted RBP18.93■□□□□ 0.62
RER1-209ENST00000605895 HMOX1P09601 288 aa18.93■□□□□ 0.62
RER1-209ENST00000605895 TERF1P54274 439 aa18.93■□□□□ 0.62
RER1-209ENST00000605895 KIAA2012Q0VF49 1180 aa18.93■□□□□ 0.62
RER1-209ENST00000605895 ZNF710Q8N1W2 664 aa18.93■□□□□ 0.62
RER1-209ENST00000605895 LAMC1P11047 1609 aa18.93■□□□□ 0.62
RER1-209ENST00000605895 RABEP1Q15276 862 aa18.92■□□□□ 0.62
RER1-209ENST00000605895 TSHZ3Q63HK5 1081 aa18.92■□□□□ 0.62
RER1-209ENST00000605895 MAPK8IP2Q13387 824 aaPredicted RBP18.92■□□□□ 0.62
RER1-209ENST00000605895 STK26Q9P289 416 aa18.92■□□□□ 0.62
RER1-209ENST00000605895 GADD45BO75293 160 aaPredicted RBP18.91■□□□□ 0.62
RER1-209ENST00000605895 HS1BP3Q53T59 392 aa18.91■□□□□ 0.62
RER1-209ENST00000605895 USP26Q9BXU7 913 aa18.91■□□□□ 0.62
RER1-209ENST00000605895 IQSEC2Q5JU85 1478 aa18.91■□□□□ 0.62
RER1-209ENST00000605895 PLEKHM2Q8IWE5 1019 aa18.9■□□□□ 0.62
RER1-209ENST00000605895 MADDQ8WXG6 1647 aa18.9■□□□□ 0.62
RER1-209ENST00000605895 CD109Q6YHK3 1445 aa18.9■□□□□ 0.62
RER1-209ENST00000605895 NEK4P51957 841 aa18.9■□□□□ 0.62
RER1-209ENST00000605895 IFT140Q96RY7 1462 aa18.89■□□□□ 0.61
RER1-209ENST00000605895 DMTNQ08495 405 aa18.89■□□□□ 0.61
RER1-209ENST00000605895 LARP6Q9BRS8 491 aaKnown RBP18.89■□□□□ 0.61
RER1-209ENST00000605895 CYP2E1P05181 493 aaPredicted RBP18.88■□□□□ 0.61
RER1-209ENST00000605895 GCC1Q96CN9 775 aa18.88■□□□□ 0.61
RER1-209ENST00000605895 KDM5AP29375 1690 aaKnown RBP18.88■□□□□ 0.61
RER1-209ENST00000605895 UGGT1Q9NYU2 1555 aa18.88■□□□□ 0.61
RER1-209ENST00000605895 PLEKHF1Q96S99 279 aa18.88■□□□□ 0.61
RER1-209ENST00000605895 TSPY26PQ9H489 355 aa18.88■□□□□ 0.61
RER1-209ENST00000605895 PTPRTO14522 1441 aa18.87■□□□□ 0.61
RER1-209ENST00000605895 ST18O60284 1047 aa18.87■□□□□ 0.61
RER1-209ENST00000605895 IBTKQ9P2D0 1353 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms