RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 GABBR1Q9UBS5 961 aa8.92□□□□□ -0.98
TUBE1-207ENST00000604689 LMOD1P29536 600 aaPredicted RBP8.92□□□□□ -0.98
TUBE1-207ENST00000604689 NAP1L1P55209 391 aaKnown RBP8.92□□□□□ -0.98
TUBE1-207ENST00000604689 PDE6BP35913 854 aa8.91□□□□□ -0.98
TUBE1-207ENST00000604689 PSEN1P49768 467 aa8.91□□□□□ -0.98
TUBE1-207ENST00000604689 SSUH2Q9Y2M2 353 aa8.91□□□□□ -0.98
TUBE1-207ENST00000604689 TBC1D12O60347 775 aa8.9□□□□□ -0.98
TUBE1-207ENST00000604689 MMP14P50281 582 aa8.9□□□□□ -0.98
TUBE1-207ENST00000604689 CSPP1Q1MSJ5 1256 aa8.9□□□□□ -0.98
TUBE1-207ENST00000604689 AKNAQ7Z591 1439 aa8.9□□□□□ -0.98
TUBE1-207ENST00000604689 SH3D19Q5HYK7 790 aa8.9□□□□□ -0.98
TUBE1-207ENST00000604689 DNAJC14Q6Y2X3 702 aaPredicted RBP8.9□□□□□ -0.98
TUBE1-207ENST00000604689 SPDYE2BA6NHP3 402 aa8.9□□□□□ -0.99
TUBE1-207ENST00000604689 SPDYE5A6NIY4 337 aa8.9□□□□□ -0.99
TUBE1-207ENST00000604689 SPDYE6P0CI01 402 aa8.9□□□□□ -0.99
TUBE1-207ENST00000604689 MDM2Q00987 491 aaPredicted RBP8.9□□□□□ -0.99
TUBE1-207ENST00000604689 MAP2K1Q02750 393 aaPredicted RBP8.9□□□□□ -0.99
TUBE1-207ENST00000604689 SPDYE2Q495Y8 402 aa8.9□□□□□ -0.99
TUBE1-207ENST00000604689 UBXN4Q92575 508 aa8.9□□□□□ -0.99
TUBE1-207ENST00000604689 NBPF20Q3BBV1 942 aa8.89□□□□□ -0.99
TUBE1-207ENST00000604689 BEGAINQ9BUH8 593 aa8.89□□□□□ -0.99
TUBE1-207ENST00000604689 PES1O00541 588 aaKnown RBP8.89□□□□□ -0.99
TUBE1-207ENST00000604689 SERPINB4P48594 390 aa8.89□□□□□ -0.99
TUBE1-207ENST00000604689 GOLGA6CA6NDK9 693 aa8.88□□□□□ -0.99
TUBE1-207ENST00000604689 GOLGA6BA6NDN3 693 aa8.88□□□□□ -0.99
TUBE1-207ENST00000604689 GOLGA6DP0CG33 693 aa8.88□□□□□ -0.99
TUBE1-207ENST00000604689 TSR1Q2NL82 804 aaKnown RBP8.88□□□□□ -0.99
TUBE1-207ENST00000604689 SGIP1Q9BQI5 828 aa8.88□□□□□ -0.99
TUBE1-207ENST00000604689 GOLGA6AQ9NYA3 693 aa8.88□□□□□ -0.99
TUBE1-207ENST00000604689 FAM13BQ9NYF5 915 aa8.88□□□□□ -0.99
TUBE1-207ENST00000604689 IQSEC3Q9UPP2 1182 aaPredicted RBP8.88□□□□□ -0.99
TUBE1-207ENST00000604689 WASHC2AQ641Q2 1341 aa8.88□□□□□ -0.99
TUBE1-207ENST00000604689 ZC3H4Q9UPT8 1303 aaKnown RBP8.88□□□□□ -0.99
TUBE1-207ENST00000604689 NUP160Q12769 1436 aa8.88□□□□□ -0.99
TUBE1-207ENST00000604689 RAPGEF2Q9Y4G8 1499 aa8.88□□□□□ -0.99
TUBE1-207ENST00000604689 TMEM88BA6NKF7 163 aa8.88□□□□□ -0.99
TUBE1-207ENST00000604689 FRAT1Q92837 279 aaPredicted RBP8.88□□□□□ -0.99
TUBE1-207ENST00000604689 USTQ9Y2C2 406 aa8.88□□□□□ -0.99
TUBE1-207ENST00000604689 ERBB3P21860 1342 aa8.88□□□□□ -0.99
TUBE1-207ENST00000604689 MAP3K4Q9Y6R4 1608 aa8.88□□□□□ -0.99
TUBE1-207ENST00000604689 MAPKBP1O60336 1514 aa8.88□□□□□ -0.99
TUBE1-207ENST00000604689 EFCAB3Q8N7B9 438 aa8.88□□□□□ -0.99
TUBE1-207ENST00000604689 SBNO2Q9Y2G9 1366 aa8.87□□□□□ -0.99
TUBE1-207ENST00000604689 SH3BP5O60239 455 aa8.87□□□□□ -0.99
TUBE1-207ENST00000604689 MRS2Q9HD23 443 aa8.87□□□□□ -0.99
TUBE1-207ENST00000604689 PAX3P23760 479 aa8.87□□□□□ -0.99
TUBE1-207ENST00000604689 ZC3H6P61129 1189 aaKnown RBP8.87□□□□□ -0.99
TUBE1-207ENST00000604689 RNF217Q8TC41 542 aa8.87□□□□□ -0.99
TUBE1-207ENST00000604689 DHX38Q92620 1227 aaKnown RBP8.87□□□□□ -0.99
TUBE1-207ENST00000604689 PARNO95453 639 aaKnown RBP8.87□□□□□ -0.99
TUBE1-207ENST00000604689 ISY1Q9ULR0 285 aaKnown RBP8.87□□□□□ -0.99
TUBE1-207ENST00000604689 UGGT2Q9NYU1 1516 aa8.86□□□□□ -0.99
TUBE1-207ENST00000604689 IPO8O15397 1037 aaKnown RBP8.86□□□□□ -0.99
TUBE1-207ENST00000604689 RFC5P40937 340 aa8.86□□□□□ -0.99
TUBE1-207ENST00000604689 NUTM2GQ5VZR2 741 aa8.86□□□□□ -0.99
TUBE1-207ENST00000604689 CEP164Q9UPV0 1460 aa8.86□□□□□ -0.99
TUBE1-207ENST00000604689 GNPATO15228 680 aa8.86□□□□□ -0.99
TUBE1-207ENST00000604689 FAM161AQ3B820 660 aa8.86□□□□□ -0.99
TUBE1-207ENST00000604689 SMAP1Q8IYB5 467 aaPredicted RBP8.86□□□□□ -0.99
TUBE1-207ENST00000604689 RBM46Q8TBY0 533 aaKnown RBP8.86□□□□□ -0.99
TUBE1-207ENST00000604689 SSFA2P28290 1259 aa8.85□□□□□ -0.99
TUBE1-207ENST00000604689 EMILIN3Q9NT22 766 aa8.85□□□□□ -0.99
TUBE1-207ENST00000604689 TBC1D2Q9BYX2 928 aa8.85□□□□□ -0.99
TUBE1-207ENST00000604689 BIN2Q9UBW5 565 aaPredicted RBP8.85□□□□□ -0.99
TUBE1-207ENST00000604689 G3BP2Q9UN86 482 aaKnown RBP8.85□□□□□ -0.99
TUBE1-207ENST00000604689 OTUD6BQ8N6M0 293 aa8.85□□□□□ -0.99
TUBE1-207ENST00000604689 DCAF11Q8TEB1 546 aa8.85□□□□□ -0.99
TUBE1-207ENST00000604689 RECKO95980 971 aa8.84□□□□□ -0.99
TUBE1-207ENST00000604689 SRPK2P78362 688 aaKnown RBP8.84□□□□□ -0.99
TUBE1-207ENST00000604689 CCNB3Q8WWL7 1395 aa8.84□□□□□ -0.99
TUBE1-207ENST00000604689 NBPF9Q3BBW0 867 aa8.84□□□□□ -0.99
TUBE1-207ENST00000604689 FANCD2Q9BXW9 1451 aa8.84□□□□□ -0.99
TUBE1-207ENST00000604689 CEP170Q5SW79 1584 aa8.84□□□□□ -0.99
TUBE1-207ENST00000604689 PDS5BQ9NTI5 1447 aa8.84□□□□□ -0.99
TUBE1-207ENST00000604689 CALRP27797 417 aaKnown RBP8.84□□□□□ -1
TUBE1-207ENST00000604689 CCDC96Q2M329 555 aa8.84□□□□□ -1
TUBE1-207ENST00000604689 NBPF6Q5VWK0 638 aa8.84□□□□□ -1
TUBE1-207ENST00000604689 NBPF5PQ86XG9 351 aaPredicted RBP8.84□□□□□ -1
TUBE1-207ENST00000604689 ACRBPQ8NEB7 543 aa8.84□□□□□ -1
TUBE1-207ENST00000604689 NBPF4Q96M43 638 aa8.84□□□□□ -1
TUBE1-207ENST00000604689 PHOX2BQ99453 314 aa8.84□□□□□ -1
TUBE1-207ENST00000604689 CTDP1Q9Y5B0 961 aaPredicted RBP8.84□□□□□ -1
TUBE1-207ENST00000604689 PALM3A6NDB9 673 aaPredicted RBP8.83□□□□□ -1
TUBE1-207ENST00000604689 ZNF280DQ6N043 979 aa8.83□□□□□ -1
TUBE1-207ENST00000604689 TSHZ1Q6ZSZ6 1077 aa8.83□□□□□ -1
TUBE1-207ENST00000604689 LNPKQ9C0E8 428 aa8.83□□□□□ -1
TUBE1-207ENST00000604689 FARP1Q9Y4F1 1045 aaPredicted RBP8.83□□□□□ -1
TUBE1-207ENST00000604689 UHRF1BP1LA0JNW5 1464 aa8.83□□□□□ -1
TUBE1-207ENST00000604689 PAIP2Q9BPZ3 127 aaKnown RBP8.83□□□□□ -1
TUBE1-207ENST00000604689 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.82□□□□□ -1
TUBE1-207ENST00000604689 PPP1R12CQ9BZL4 782 aa8.82□□□□□ -1
TUBE1-207ENST00000604689 REREQ9P2R6 1566 aa8.82□□□□□ -1
TUBE1-207ENST00000604689 ARAP3Q8WWN8 1544 aa8.82□□□□□ -1
TUBE1-207ENST00000604689 ANKRD33BA6NCL7 494 aa8.82□□□□□ -1
TUBE1-207ENST00000604689 KCNJ4P48050 445 aa8.82□□□□□ -1
TUBE1-207ENST00000604689 CEP120Q8N960 986 aa8.82□□□□□ -1
TUBE1-207ENST00000604689 STK32AQ8WU08 396 aa8.82□□□□□ -1
TUBE1-207ENST00000604689 CABP2Q9NPB3 220 aa8.82□□□□□ -1
TUBE1-207ENST00000604689 PDE4AP27815 886 aa8.82□□□□□ -1
TUBE1-207ENST00000604689 ERCC5P28715 1186 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 191.9 ms