RNA–Protein interactions for RNA: ENST00000604609.2

GDF15-205, Transcript of growth differentiation factor 15, human

TSL 3

Gene GDF15, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GDF15-205	ENST00000604609	CABLES1	Q8TDN4	633 aa		13.66	□□□□□ -0.22
GDF15-205	ENST00000604609	NSD3	Q9BZ95	1437 aa		13.65	□□□□□ -0.22
GDF15-205	ENST00000604609	NHSL1	Q5SYE7	1610 aa		13.65	□□□□□ -0.22
GDF15-205	ENST00000604609	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.65	□□□□□ -0.22
GDF15-205	ENST00000604609	TERF2IP	Q9NYB0	399 aa		13.65	□□□□□ -0.22
GDF15-205	ENST00000604609	PNPLA6	Q8IY17	1366 aa		13.65	□□□□□ -0.22
GDF15-205	ENST00000604609	KIF1A	Q12756	1690 aa		13.64	□□□□□ -0.23
GDF15-205	ENST00000604609	DDX10	Q13206	875 aa	Known RBP	13.64	□□□□□ -0.23
GDF15-205	ENST00000604609	CNGB1	Q14028	1251 aa	Predicted RBP	13.64	□□□□□ -0.23
GDF15-205	ENST00000604609	TNS3	Q68CZ2	1445 aa		13.64	□□□□□ -0.23
GDF15-205	ENST00000604609	SBNO1	A3KN83	1393 aa		13.63	□□□□□ -0.23
GDF15-205	ENST00000604609	NINL	Q9Y2I6	1382 aa		13.63	□□□□□ -0.23
GDF15-205	ENST00000604609	FBLN1	P23142	703 aa		13.62	□□□□□ -0.23
GDF15-205	ENST00000604609	GGNBP2	Q9H3C7	697 aa		13.62	□□□□□ -0.23
GDF15-205	ENST00000604609	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.61	□□□□□ -0.23
GDF15-205	ENST00000604609	NUTM2E	B1AL46	878 aa	Predicted RBP	13.61	□□□□□ -0.23
GDF15-205	ENST00000604609	SOX12	O15370	315 aa		13.61	□□□□□ -0.23
GDF15-205	ENST00000604609	PER1	O15534	1290 aa	Predicted RBP	13.61	□□□□□ -0.23
GDF15-205	ENST00000604609	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.61	□□□□□ -0.23
GDF15-205	ENST00000604609	ABTB2	Q8N961	1025 aa		13.61	□□□□□ -0.23
GDF15-205	ENST00000604609	LRRC59	Q96AG4	307 aa	Known RBP	13.61	□□□□□ -0.23
GDF15-205	ENST00000604609	ZNF692	Q9BU19	519 aa	Predicted RBP	13.61	□□□□□ -0.23
GDF15-205	ENST00000604609	EDC4	Q6P2E9	1401 aa	Known RBP	13.61	□□□□□ -0.23
GDF15-205	ENST00000604609	PHLPP1	O60346	1717 aa		13.61	□□□□□ -0.23
GDF15-205	ENST00000604609	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.61	□□□□□ -0.23
GDF15-205	ENST00000604609	FYB1	O15117	783 aa		13.6	□□□□□ -0.23
GDF15-205	ENST00000604609	ITSN1	Q15811	1721 aa		13.6	□□□□□ -0.23
GDF15-205	ENST00000604609	JCAD	Q9P266	1359 aa		13.59	□□□□□ -0.23
GDF15-205	ENST00000604609	NRK	Q7Z2Y5	1582 aa		13.59	□□□□□ -0.23
GDF15-205	ENST00000604609	NLRP6	P59044	892 aa		13.59	□□□□□ -0.23
GDF15-205	ENST00000604609	LRP6	O75581	1613 aa		13.59	□□□□□ -0.23
GDF15-205	ENST00000604609	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.58	□□□□□ -0.24
GDF15-205	ENST00000604609	MED1	Q15648	1581 aa	Predicted RBP	13.58	□□□□□ -0.24
GDF15-205	ENST00000604609	ADAMTS2	O95450	1211 aa		13.57	□□□□□ -0.24
GDF15-205	ENST00000604609	CC2D1B	Q5T0F9	858 aa	Known RBP	13.57	□□□□□ -0.24
GDF15-205	ENST00000604609	PIK3C2A	O00443	1686 aa		13.56	□□□□□ -0.24
GDF15-205	ENST00000604609	USP19	O94966	1318 aa		13.56	□□□□□ -0.24
GDF15-205	ENST00000604609	TTC21A	Q8NDW8	1320 aa		13.56	□□□□□ -0.24
GDF15-205	ENST00000604609	ARHGEF10	O15013	1369 aa		13.56	□□□□□ -0.24
GDF15-205	ENST00000604609	MON2	Q7Z3U7	1717 aa		13.56	□□□□□ -0.24
GDF15-205	ENST00000604609	OVOS2	A0A0J9YW53	1432 aa		13.56	□□□□□ -0.24
GDF15-205	ENST00000604609	OVOS2	Q6IE36	1432 aa		13.56	□□□□□ -0.24
GDF15-205	ENST00000604609	AKAP12	Q02952	1782 aa		13.55	□□□□□ -0.24
GDF15-205	ENST00000604609	SOCS7	O14512	581 aa		13.55	□□□□□ -0.24
GDF15-205	ENST00000604609	TNNT2	P45379	298 aa	Predicted RBP	13.55	□□□□□ -0.24
GDF15-205	ENST00000604609	USP31	Q70CQ4	1352 aa		13.55	□□□□□ -0.24
GDF15-205	ENST00000604609	ALS2	Q96Q42	1657 aa		13.54	□□□□□ -0.24
GDF15-205	ENST00000604609	ZBTB7C	A1YPR0	619 aa		13.54	□□□□□ -0.24
GDF15-205	ENST00000604609	ZC3H6	P61129	1189 aa	Known RBP	13.54	□□□□□ -0.24
GDF15-205	ENST00000604609	KNSTRN	Q9Y448	316 aa		13.54	□□□□□ -0.24
GDF15-205	ENST00000604609	CHRNA2	Q15822	529 aa		13.53	□□□□□ -0.24
GDF15-205	ENST00000604609	NLRP13	Q86W25	1043 aa		13.53	□□□□□ -0.24
GDF15-205	ENST00000604609	CGNL1	Q0VF96	1302 aa		13.53	□□□□□ -0.24
GDF15-205	ENST00000604609	BRD4	O60885	1362 aa	Predicted RBP	13.53	□□□□□ -0.24
GDF15-205	ENST00000604609	GC	P02774	474 aa		13.52	□□□□□ -0.25
GDF15-205	ENST00000604609	RRS1	Q15050	365 aa	Known RBP	13.52	□□□□□ -0.25
GDF15-205	ENST00000604609	COG3	Q96JB2	828 aa		13.52	□□□□□ -0.25
GDF15-205	ENST00000604609	SLIT3	O75094	1523 aa		13.51	□□□□□ -0.25
GDF15-205	ENST00000604609	KIAA0232	Q92628	1395 aa		13.51	□□□□□ -0.25
GDF15-205	ENST00000604609	SPATA31A6	Q5VVP1	1343 aa		13.5	□□□□□ -0.25
GDF15-205	ENST00000604609	FAM83G	A6ND36	823 aa		13.5	□□□□□ -0.25
GDF15-205	ENST00000604609	HAP1	P54257	671 aa	Predicted RBP	13.5	□□□□□ -0.25
GDF15-205	ENST00000604609	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.5	□□□□□ -0.25
GDF15-205	ENST00000604609	C8orf37	Q96NL8	207 aa		13.49	□□□□□ -0.25
GDF15-205	ENST00000604609	EMILIN1	Q9Y6C2	1016 aa		13.49	□□□□□ -0.25
GDF15-205	ENST00000604609	MARF1	Q9Y4F3	1742 aa	Known RBP	13.49	□□□□□ -0.25
GDF15-205	ENST00000604609	NFAT5	O94916	1531 aa		13.49	□□□□□ -0.25
GDF15-205	ENST00000604609	SHPRH	Q149N8	1683 aa		13.48	□□□□□ -0.25
GDF15-205	ENST00000604609	MORC1	Q86VD1	984 aa		13.48	□□□□□ -0.25
GDF15-205	ENST00000604609	MAP3K19	Q56UN5	1328 aa		13.47	□□□□□ -0.25
GDF15-205	ENST00000604609	ARHGEF25	Q86VW2	580 aa		13.47	□□□□□ -0.25
GDF15-205	ENST00000604609	PRDM11	Q9NQV5	511 aa		13.47	□□□□□ -0.25
GDF15-205	ENST00000604609	AXIN2	Q9Y2T1	843 aa		13.47	□□□□□ -0.25
GDF15-205	ENST00000604609	CRYBG1	Q9Y4K1	1723 aa		13.47	□□□□□ -0.25
GDF15-205	ENST00000604609	MEX3C	Q5U5Q3	659 aa	Known RBP	13.46	□□□□□ -0.25
GDF15-205	ENST00000604609	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.46	□□□□□ -0.26
GDF15-205	ENST00000604609	ABCA3	Q99758	1704 aa		13.45	□□□□□ -0.26
GDF15-205	ENST00000604609	POLK	Q9UBT6	870 aa		13.45	□□□□□ -0.26
GDF15-205	ENST00000604609	RGS17	Q9UGC6	210 aa	Predicted RBP	13.45	□□□□□ -0.26
GDF15-205	ENST00000604609	NSD2	O96028	1365 aa		13.45	□□□□□ -0.26
GDF15-205	ENST00000604609	PPM1G	O15355	546 aa	Predicted RBP	13.44	□□□□□ -0.26
GDF15-205	ENST00000604609	KCNH5	Q8NCM2	988 aa		13.44	□□□□□ -0.26
GDF15-205	ENST00000604609	NGLY1	Q96IV0	654 aa		13.44	□□□□□ -0.26
GDF15-205	ENST00000604609	CPD	O75976	1380 aa		13.44	□□□□□ -0.26
GDF15-205	ENST00000604609	NPC1L1	Q9UHC9	1359 aa		13.44	□□□□□ -0.26
GDF15-205	ENST00000604609	AFF2	P51816	1311 aa		13.43	□□□□□ -0.26
GDF15-205	ENST00000604609	HSP90AB2P	Q58FF8	381 aa		13.43	□□□□□ -0.26
GDF15-205	ENST00000604609	BTG4	Q9NY30	223 aa		13.43	□□□□□ -0.26
GDF15-205	ENST00000604609	PARD3	Q8TEW0	1356 aa		13.43	□□□□□ -0.26
GDF15-205	ENST00000604609	PPP2R1A	P30153	589 aa		13.42	□□□□□ -0.26
GDF15-205	ENST00000604609	LTV1	Q96GA3	475 aa	Predicted RBP	13.42	□□□□□ -0.26
GDF15-205	ENST00000604609	BCL9L	Q86UU0	1499 aa		13.42	□□□□□ -0.26
GDF15-205	ENST00000604609	USP54	Q70EL1	1684 aa		13.41	□□□□□ -0.26
GDF15-205	ENST00000604609	CAMTA1	Q9Y6Y1	1673 aa		13.41	□□□□□ -0.26
GDF15-205	ENST00000604609	HOXC9	P31274	260 aa		13.41	□□□□□ -0.26
GDF15-205	ENST00000604609	STRN4	Q9NRL3	753 aa		13.41	□□□□□ -0.26
GDF15-205	ENST00000604609	AATK	Q6ZMQ8	1374 aa		13.41	□□□□□ -0.26
GDF15-205	ENST00000604609	KIF20B	Q96Q89	1820 aa		13.41	□□□□□ -0.26
GDF15-205	ENST00000604609	SLIT2	O94813	1529 aa		13.4	□□□□□ -0.26
GDF15-205	ENST00000604609	PEAK1	Q9H792	1746 aa		13.4	□□□□□ -0.26

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