RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 BLMP54132 1417 aaPredicted RBP19.11■□□□□ 0.65
RPS28-204ENST00000602140 SRCAPQ6ZRS2 3230 aa19.11■□□□□ 0.65
RPS28-204ENST00000602140 ITSN1Q15811 1721 aa19.1■□□□□ 0.65
RPS28-204ENST00000602140 COL14A1Q05707 1796 aaKnown RBP19.09■□□□□ 0.65
RPS28-204ENST00000602140 NRAPQ86VF7 1730 aa19.09■□□□□ 0.65
RPS28-204ENST00000602140 A0A0G2JS52 829 aa19.09■□□□□ 0.65
RPS28-204ENST00000602140 MYT1Q01538 1121 aa19.09■□□□□ 0.65
RPS28-204ENST00000602140 NBPF1Q3BBV0 1214 aa19.09■□□□□ 0.65
RPS28-204ENST00000602140 KRT27Q7Z3Y8 459 aa19.09■□□□□ 0.65
RPS28-204ENST00000602140 KIAA1210Q9ULL0 1709 aa19.08■□□□□ 0.65
RPS28-204ENST00000602140 FAM98CQ17RN3 349 aaKnown RBP19.08■□□□□ 0.64
RPS28-204ENST00000602140 CRYBG1Q9Y4K1 1723 aa19.07■□□□□ 0.64
RPS28-204ENST00000602140 SF3B2Q13435 895 aaKnown RBP19.06■□□□□ 0.64
RPS28-204ENST00000602140 DEFB132Q7Z7B7 95 aa19.06■□□□□ 0.64
RPS28-204ENST00000602140 PRDM11Q9NQV5 511 aa19.06■□□□□ 0.64
RPS28-204ENST00000602140 CCDC61Q9Y6R9 512 aa19.06■□□□□ 0.64
RPS28-204ENST00000602140 ACEP12821 1306 aa19.05■□□□□ 0.64
RPS28-204ENST00000602140 NUTM2GQ5VZR2 741 aa19.05■□□□□ 0.64
RPS28-204ENST00000602140 NBPF8Q3BBV2 869 aa19.04■□□□□ 0.64
RPS28-204ENST00000602140 POLR3AO14802 1390 aaPredicted RBP19.04■□□□□ 0.64
RPS28-204ENST00000602140 SPATA31A5Q5VU36 1347 aa19.03■□□□□ 0.64
RPS28-204ENST00000602140 SPATA31A7Q8IWB4 1347 aa19.03■□□□□ 0.64
RPS28-204ENST00000602140 PLEKHG3A1L390 1219 aa19.03■□□□□ 0.64
RPS28-204ENST00000602140 TOPAZ1Q8N9V7 1692 aa19.03■□□□□ 0.64
RPS28-204ENST00000602140 KIAA0232Q92628 1395 aa19.03■□□□□ 0.64
RPS28-204ENST00000602140 CHRNA2Q15822 529 aa19.02■□□□□ 0.64
RPS28-204ENST00000602140 ZC3H6P61129 1189 aaKnown RBP19.01■□□□□ 0.63
RPS28-204ENST00000602140 SRPK2P78362 688 aaKnown RBP19.01■□□□□ 0.63
RPS28-204ENST00000602140 CENPJQ9HC77 1338 aaPredicted RBP19■□□□□ 0.63
RPS28-204ENST00000602140 PHRF1Q9P1Y6 1649 aaKnown RBP19■□□□□ 0.63
RPS28-204ENST00000602140 ABTB2Q8N961 1025 aa18.99■□□□□ 0.63
RPS28-204ENST00000602140 FAM182BQ5T319 152 aa18.98■□□□□ 0.63
RPS28-204ENST00000602140 L3MBTL2Q969R5 705 aa18.98■□□□□ 0.63
RPS28-204ENST00000602140 CABP2Q9NPB3 220 aa18.98■□□□□ 0.63
RPS28-204ENST00000602140 STRN4Q9NRL3 753 aa18.98■□□□□ 0.63
RPS28-204ENST00000602140 PPIP5K1Q6PFW1 1433 aa18.98■□□□□ 0.63
RPS28-204ENST00000602140 SPATA31A1Q5TZJ5 1347 aa18.98■□□□□ 0.63
RPS28-204ENST00000602140 BAG6P46379 1132 aa18.96■□□□□ 0.63
RPS28-204ENST00000602140 SIN3AQ96ST3 1273 aa18.96■□□□□ 0.63
RPS28-204ENST00000602140 THSD7AQ9UPZ6 1657 aa18.95■□□□□ 0.62
RPS28-204ENST00000602140 QRICH2Q9H0J4 1663 aa18.95■□□□□ 0.62
RPS28-204ENST00000602140 EVA1CP58658 441 aa18.94■□□□□ 0.62
RPS28-204ENST00000602140 NRKQ7Z2Y5 1582 aa18.93■□□□□ 0.62
RPS28-204ENST00000602140 NLRP13Q86W25 1043 aa18.93■□□□□ 0.62
RPS28-204ENST00000602140 USP35Q9P2H5 1018 aa18.93■□□□□ 0.62
RPS28-204ENST00000602140 USP19O94966 1318 aa18.93■□□□□ 0.62
RPS28-204ENST00000602140 NEUROD1Q13562 356 aa18.92■□□□□ 0.62
RPS28-204ENST00000602140 CABP1Q9NZU7 370 aa18.92■□□□□ 0.62
RPS28-204ENST00000602140 SSH2Q76I76 1423 aa18.91■□□□□ 0.62
RPS28-204ENST00000602140 GCP02774 474 aa18.91■□□□□ 0.62
RPS28-204ENST00000602140 EN1Q05925 392 aaPredicted RBP18.91■□□□□ 0.62
RPS28-204ENST00000602140 CAMTA1Q9Y6Y1 1673 aa18.91■□□□□ 0.62
RPS28-204ENST00000602140 CPDO75976 1380 aa18.91■□□□□ 0.62
RPS28-204ENST00000602140 LARP1Q6PKG0 1096 aaKnown RBP18.9■□□□□ 0.62
RPS28-204ENST00000602140 TRPM1Q7Z4N2 1603 aa18.89■□□□□ 0.62
RPS28-204ENST00000602140 RGPD1P0DJD0 1748 aa18.89■□□□□ 0.61
RPS28-204ENST00000602140 BRD4O60885 1362 aaPredicted RBP18.89■□□□□ 0.61
RPS28-204ENST00000602140 USP6P35125 1406 aa18.89■□□□□ 0.61
RPS28-204ENST00000602140 BARGINQ6ZT62 677 aa18.88■□□□□ 0.61
RPS28-204ENST00000602140 EVC2Q86UK5 1308 aa18.88■□□□□ 0.61
RPS28-204ENST00000602140 ROCK2O75116 1388 aaKnown RBP18.88■□□□□ 0.61
RPS28-204ENST00000602140 LMO7Q8WWI1 1683 aa18.88■□□□□ 0.61
RPS28-204ENST00000602140 PSDA5PKW4 1024 aaPredicted RBP18.87■□□□□ 0.61
RPS28-204ENST00000602140 NLRP6P59044 892 aa18.87■□□□□ 0.61
RPS28-204ENST00000602140 FAM196AQ6ZSG2 479 aa18.87■□□□□ 0.61
RPS28-204ENST00000602140 TRIM37O94972 964 aa18.86■□□□□ 0.61
RPS28-204ENST00000602140 TCP11L2Q8N4U5 519 aa18.86■□□□□ 0.61
RPS28-204ENST00000602140 DISP2A7MBM2 1401 aa18.85■□□□□ 0.61
RPS28-204ENST00000602140 ZBTB7CA1YPR0 619 aa18.85■□□□□ 0.61
RPS28-204ENST00000602140 PDE3BQ13370 1112 aa18.85■□□□□ 0.61
RPS28-204ENST00000602140 TNS1Q9HBL0 1735 aaKnown RBP18.85■□□□□ 0.61
RPS28-204ENST00000602140 COL5A2P05997 1499 aaPredicted RBP18.84■□□□□ 0.61
RPS28-204ENST00000602140 EZH2Q15910 746 aaKnown RBP18.83■□□□□ 0.6
RPS28-204ENST00000602140 THRAP3Q9Y2W1 955 aaKnown RBP18.83■□□□□ 0.6
RPS28-204ENST00000602140 SLIT3O75094 1523 aa18.82■□□□□ 0.6
RPS28-204ENST00000602140 APBA3O96018 575 aa18.81■□□□□ 0.6
RPS28-204ENST00000602140 ZNF692Q9BU19 519 aaPredicted RBP18.81■□□□□ 0.6
RPS28-204ENST00000602140 AATKQ6ZMQ8 1374 aa18.81■□□□□ 0.6
RPS28-204ENST00000602140 PIK3C2AO00443 1686 aa18.8■□□□□ 0.6
RPS28-204ENST00000602140 R3HDM1Q15032 1099 aaKnown RBP18.8■□□□□ 0.6
RPS28-204ENST00000602140 CAMKK2Q96RR4 588 aa18.8■□□□□ 0.6
RPS28-204ENST00000602140 CRB1P82279 1406 aa18.8■□□□□ 0.6
RPS28-204ENST00000602140 TTC21BQ7Z4L5 1316 aa18.79■□□□□ 0.6
RPS28-204ENST00000602140 LRP5O75197 1615 aa18.79■□□□□ 0.6
RPS28-204ENST00000602140 TOM1L2Q6ZVM7 507 aa18.76■□□□□ 0.59
RPS28-204ENST00000602140 AXIN2Q9Y2T1 843 aa18.76■□□□□ 0.59
RPS28-204ENST00000602140 PARP4Q9UKK3 1724 aaKnown RBP18.76■□□□□ 0.59
RPS28-204ENST00000602140 AKAP12Q02952 1782 aa18.76■□□□□ 0.59
RPS28-204ENST00000602140 SOX12O15370 315 aa18.75■□□□□ 0.59
RPS28-204ENST00000602140 KCNH5Q8NCM2 988 aa18.75■□□□□ 0.59
RPS28-204ENST00000602140 KTN1Q86UP2 1357 aaKnown RBP18.75■□□□□ 0.59
RPS28-204ENST00000602140 PARD3Q8TEW0 1356 aa18.75■□□□□ 0.59
RPS28-204ENST00000602140 TTC21AQ8NDW8 1320 aa18.74■□□□□ 0.59
RPS28-204ENST00000602140 CPSF1Q10570 1443 aaKnown RBP18.74■□□□□ 0.59
RPS28-204ENST00000602140 COL18A1P39060 1754 aa18.74■□□□□ 0.59
RPS28-204ENST00000602140 ARHGEF25Q86VW2 580 aa18.74■□□□□ 0.59
RPS28-204ENST00000602140 CARD11Q9BXL7 1154 aa18.74■□□□□ 0.59
RPS28-204ENST00000602140 WDR17Q8IZU2 1322 aa18.73■□□□□ 0.59
RPS28-204ENST00000602140 SBNO2Q9Y2G9 1366 aa18.72■□□□□ 0.59
RPS28-204ENST00000602140 DDB1Q16531 1140 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms