RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 RGPD1P0DJD0 1748 aa16.39■□□□□ 0.21
CHMP2A-207ENST00000600804 COL14A1Q05707 1796 aaKnown RBP16.38■□□□□ 0.21
CHMP2A-207ENST00000600804 PHF8Q9UPP1 1060 aa16.38■□□□□ 0.21
CHMP2A-207ENST00000600804 SEPT12Q8IYM1 358 aa16.37■□□□□ 0.21
CHMP2A-207ENST00000600804 PRAM1Q96QH2 718 aa16.37■□□□□ 0.21
CHMP2A-207ENST00000600804 SBNO1A3KN83 1393 aa16.37■□□□□ 0.21
CHMP2A-207ENST00000600804 QRICH2Q9H0J4 1663 aa16.37■□□□□ 0.21
CHMP2A-207ENST00000600804 THSD7AQ9UPZ6 1657 aa16.37■□□□□ 0.21
CHMP2A-207ENST00000600804 VPS72Q15906 364 aa16.36■□□□□ 0.21
CHMP2A-207ENST00000600804 PHRF1Q9P1Y6 1649 aaKnown RBP16.35■□□□□ 0.21
CHMP2A-207ENST00000600804 ST20-MTHFSA0A0A6YYL1 179 aa16.35■□□□□ 0.21
CHMP2A-207ENST00000600804 ONECUT3O60422 494 aaPredicted RBP16.35■□□□□ 0.21
CHMP2A-207ENST00000600804 PLEKHG5O94827 1062 aa16.35■□□□□ 0.21
CHMP2A-207ENST00000600804 TESK2Q96S53 571 aa16.35■□□□□ 0.21
CHMP2A-207ENST00000600804 POGKQ9P215 609 aa16.35■□□□□ 0.21
CHMP2A-207ENST00000600804 HSPA5P11021 654 aaKnown RBP16.34■□□□□ 0.21
CHMP2A-207ENST00000600804 ITSN1Q15811 1721 aa16.33■□□□□ 0.21
CHMP2A-207ENST00000600804 SAFB2Q14151 953 aaKnown RBP eCLIP16.33■□□□□ 0.2
CHMP2A-207ENST00000600804 ANKARQ7Z5J8 1434 aa16.33■□□□□ 0.2
CHMP2A-207ENST00000600804 FAM83GA6ND36 823 aa16.32■□□□□ 0.2
CHMP2A-207ENST00000600804 PMFBP1Q8TBY8 1022 aa16.32■□□□□ 0.2
CHMP2A-207ENST00000600804 PUS7Q96PZ0 661 aaKnown RBP16.32■□□□□ 0.2
CHMP2A-207ENST00000600804 ARHGEF10O15013 1369 aa16.31■□□□□ 0.2
CHMP2A-207ENST00000600804 PRR36Q9H6K5 1346 aa16.31■□□□□ 0.2
CHMP2A-207ENST00000600804 TULP4Q9NRJ4 1543 aa16.3■□□□□ 0.2
CHMP2A-207ENST00000600804 TOPAZ1Q8N9V7 1692 aa16.3■□□□□ 0.2
CHMP2A-207ENST00000600804 PSME1Q06323 249 aa16.29■□□□□ 0.2
CHMP2A-207ENST00000600804 KRT27Q7Z3Y8 459 aa16.29■□□□□ 0.2
CHMP2A-207ENST00000600804 HAP1P54257 671 aaPredicted RBP16.28■□□□□ 0.2
CHMP2A-207ENST00000600804 LMOD2Q6P5Q4 547 aa16.28■□□□□ 0.2
CHMP2A-207ENST00000600804 RREB1Q92766 1687 aa16.27■□□□□ 0.2
CHMP2A-207ENST00000600804 EVC2Q86UK5 1308 aa16.27■□□□□ 0.2
CHMP2A-207ENST00000600804 WASLO00401 505 aaPredicted RBP16.27■□□□□ 0.2
CHMP2A-207ENST00000600804 TMF1P82094 1093 aa16.27■□□□□ 0.2
CHMP2A-207ENST00000600804 CCDC9Q9Y3X0 531 aaKnown RBP16.27■□□□□ 0.2
CHMP2A-207ENST00000600804 MINK1Q8N4C8 1332 aaPredicted RBP16.26■□□□□ 0.19
CHMP2A-207ENST00000600804 PSDA5PKW4 1024 aaPredicted RBP16.26■□□□□ 0.19
CHMP2A-207ENST00000600804 FAM98CQ17RN3 349 aaKnown RBP16.26■□□□□ 0.19
CHMP2A-207ENST00000600804 CDCA8Q53HL2 280 aa16.26■□□□□ 0.19
CHMP2A-207ENST00000600804 HIRIP3Q9BW71 556 aaPredicted RBP16.26■□□□□ 0.19
CHMP2A-207ENST00000600804 BTG4Q9NY30 223 aa16.26■□□□□ 0.19
CHMP2A-207ENST00000600804 ATP7BP35670 1465 aa16.25■□□□□ 0.19
CHMP2A-207ENST00000600804 FAM182BQ5T319 152 aa16.25■□□□□ 0.19
CHMP2A-207ENST00000600804 NUP188Q5SRE5 1749 aa16.25■□□□□ 0.19
CHMP2A-207ENST00000600804 SF3B2Q13435 895 aaKnown RBP16.23■□□□□ 0.19
CHMP2A-207ENST00000600804 SPATA31A5Q5VU36 1347 aa16.22■□□□□ 0.19
CHMP2A-207ENST00000600804 SPATA31A7Q8IWB4 1347 aa16.22■□□□□ 0.19
CHMP2A-207ENST00000600804 NRKQ7Z2Y5 1582 aa16.22■□□□□ 0.19
CHMP2A-207ENST00000600804 CDK19Q9BWU1 502 aa16.22■□□□□ 0.19
CHMP2A-207ENST00000600804 LMO7Q8WWI1 1683 aa16.21■□□□□ 0.19
CHMP2A-207ENST00000600804 DISP2A7MBM2 1401 aa16.21■□□□□ 0.19
CHMP2A-207ENST00000600804 EN1Q05925 392 aaPredicted RBP16.21■□□□□ 0.19
CHMP2A-207ENST00000600804 NINLQ9Y2I6 1382 aa16.21■□□□□ 0.19
CHMP2A-207ENST00000600804 A0A0G2JS52 829 aa16.19■□□□□ 0.18
CHMP2A-207ENST00000600804 C11orf95C9JLR9 678 aaPredicted RBP16.19■□□□□ 0.18
CHMP2A-207ENST00000600804 BAG6P46379 1132 aa16.19■□□□□ 0.18
CHMP2A-207ENST00000600804 MYT1Q01538 1121 aa16.19■□□□□ 0.18
CHMP2A-207ENST00000600804 SBF2Q86WG5 1849 aa16.19■□□□□ 0.18
CHMP2A-207ENST00000600804 CCDC7Q96M83 1385 aa16.18■□□□□ 0.18
CHMP2A-207ENST00000600804 CCDC61Q9Y6R9 512 aa16.18■□□□□ 0.18
CHMP2A-207ENST00000600804 KIF7Q2M1P5 1343 aa16.18■□□□□ 0.18
CHMP2A-207ENST00000600804 PARP4Q9UKK3 1724 aaKnown RBP16.17■□□□□ 0.18
CHMP2A-207ENST00000600804 KIAA0232Q92628 1395 aa16.17■□□□□ 0.18
CHMP2A-207ENST00000600804 ZNF316A6NFI3 1004 aaPredicted RBP16.17■□□□□ 0.18
CHMP2A-207ENST00000600804 SRPK2P78362 688 aaKnown RBP16.17■□□□□ 0.18
CHMP2A-207ENST00000600804 NUDT16Q96DE0 195 aaKnown RBP16.17■□□□□ 0.18
CHMP2A-207ENST00000600804 CABP2Q9NPB3 220 aa16.17■□□□□ 0.18
CHMP2A-207ENST00000600804 WNK3Q9BYP7 1800 aa16.17■□□□□ 0.18
CHMP2A-207ENST00000600804 WASHC2AQ641Q2 1341 aa16.17■□□□□ 0.18
CHMP2A-207ENST00000600804 CAMTA1Q9Y6Y1 1673 aa16.16■□□□□ 0.18
CHMP2A-207ENST00000600804 SPATA31A1Q5TZJ5 1347 aa16.16■□□□□ 0.18
CHMP2A-207ENST00000600804 PLEKHG3A1L390 1219 aa16.15■□□□□ 0.18
CHMP2A-207ENST00000600804 R3HDM1Q15032 1099 aaKnown RBP16.15■□□□□ 0.18
CHMP2A-207ENST00000600804 EZH2Q15910 746 aaKnown RBP16.15■□□□□ 0.18
CHMP2A-207ENST00000600804 MYOM1P52179 1685 aa16.14■□□□□ 0.18
CHMP2A-207ENST00000600804 PEAK1Q9H792 1746 aa16.14■□□□□ 0.17
CHMP2A-207ENST00000600804 CHRNA2Q15822 529 aa16.14■□□□□ 0.17
CHMP2A-207ENST00000600804 PAK3O75914 559 aaPredicted RBP16.13■□□□□ 0.17
CHMP2A-207ENST00000600804 NGDNQ8NEJ9 315 aaKnown RBP16.13■□□□□ 0.17
CHMP2A-207ENST00000600804 PRDM11Q9NQV5 511 aa16.13■□□□□ 0.17
CHMP2A-207ENST00000600804 RGPD5Q99666 1765 aa16.13■□□□□ 0.17
CHMP2A-207ENST00000600804 CAMKK2Q96RR4 588 aa16.12■□□□□ 0.17
CHMP2A-207ENST00000600804 POLR3AO14802 1390 aaPredicted RBP16.12■□□□□ 0.17
CHMP2A-207ENST00000600804 PPIP5K1Q6PFW1 1433 aa16.11■□□□□ 0.17
CHMP2A-207ENST00000600804 SSH2Q76I76 1423 aa16.11■□□□□ 0.17
CHMP2A-207ENST00000600804 NUTM2GQ5VZR2 741 aa16.11■□□□□ 0.17
CHMP2A-207ENST00000600804 RGPD3A6NKT7 1758 aaPredicted RBP16.1■□□□□ 0.17
CHMP2A-207ENST00000600804 COL18A1P39060 1754 aa16.1■□□□□ 0.17
CHMP2A-207ENST00000600804 RGPD4Q7Z3J3 1758 aa16.1■□□□□ 0.17
CHMP2A-207ENST00000600804 LRRC37A3O60309 1634 aa16.1■□□□□ 0.17
CHMP2A-207ENST00000600804 TRIM37O94972 964 aa16.1■□□□□ 0.17
CHMP2A-207ENST00000600804 CPSF1Q10570 1443 aaKnown RBP16.1■□□□□ 0.17
CHMP2A-207ENST00000600804 AKAP12Q02952 1782 aa16.09■□□□□ 0.17
CHMP2A-207ENST00000600804 ZC3H6P61129 1189 aaKnown RBP16.09■□□□□ 0.17
CHMP2A-207ENST00000600804 CABP1Q9NZU7 370 aa16.09■□□□□ 0.17
CHMP2A-207ENST00000600804 BRD4O60885 1362 aaPredicted RBP16.09■□□□□ 0.17
CHMP2A-207ENST00000600804 ANKRD36BQ8N2N9 1353 aa16.09■□□□□ 0.17
CHMP2A-207ENST00000600804 CD163L1Q9NR16 1453 aa16.09■□□□□ 0.17
CHMP2A-207ENST00000600804 ZNF692Q9BU19 519 aaPredicted RBP16.08■□□□□ 0.16
CHMP2A-207ENST00000600804 SLC12A5Q9H2X9 1139 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms