RNA–Protein interactions for RNA: ENST00000599724.5

LTBP4-226, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-226ENST00000599724 TOPAZ1Q8N9V7 1692 aa22.48■■□□□ 1.19
LTBP4-226ENST00000599724 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.48■■□□□ 1.19
LTBP4-226ENST00000599724 CARD11Q9BXL7 1154 aa22.47■■□□□ 1.19
LTBP4-226ENST00000599724 FAM83GA6ND36 823 aa22.46■■□□□ 1.19
LTBP4-226ENST00000599724 UPF1Q92900 1129 aaKnown RBP eCLIP22.46■■□□□ 1.19
LTBP4-226ENST00000599724 POLR3AO14802 1390 aaPredicted RBP22.46■■□□□ 1.19
LTBP4-226ENST00000599724 RGS12O14924 1447 aa22.46■■□□□ 1.19
LTBP4-226ENST00000599724 SLIT2O94813 1529 aa22.46■■□□□ 1.19
LTBP4-226ENST00000599724 NWD2Q9ULI1 1742 aa22.45■■□□□ 1.19
LTBP4-226ENST00000599724 CCDC9Q9Y3X0 531 aaKnown RBP22.45■■□□□ 1.18
LTBP4-226ENST00000599724 PPIP5K1Q6PFW1 1433 aa22.45■■□□□ 1.18
LTBP4-226ENST00000599724 PLCH1Q4KWH8 1693 aa22.44■■□□□ 1.18
LTBP4-226ENST00000599724 CABP1Q9NZU7 370 aa22.44■■□□□ 1.18
LTBP4-226ENST00000599724 NUTM2GQ5VZR2 741 aa22.43■■□□□ 1.18
LTBP4-226ENST00000599724 ABTB2Q8N961 1025 aa22.43■■□□□ 1.18
LTBP4-226ENST00000599724 VPS72Q15906 364 aa22.4■■□□□ 1.18
LTBP4-226ENST00000599724 PRDM11Q9NQV5 511 aa22.4■■□□□ 1.18
LTBP4-226ENST00000599724 BTG4Q9NY30 223 aa22.4■■□□□ 1.18
LTBP4-226ENST00000599724 COL14A1Q05707 1796 aaKnown RBP22.39■■□□□ 1.17
LTBP4-226ENST00000599724 NLRP13Q86W25 1043 aa22.38■■□□□ 1.17
LTBP4-226ENST00000599724 PCGF6Q9BYE7 350 aa22.38■■□□□ 1.17
LTBP4-226ENST00000599724 CRYBG1Q9Y4K1 1723 aa22.37■■□□□ 1.17
LTBP4-226ENST00000599724 RALGAPBQ86X10 1494 aa22.37■■□□□ 1.17
LTBP4-226ENST00000599724 BRD4O60885 1362 aaPredicted RBP22.37■■□□□ 1.17
LTBP4-226ENST00000599724 ATAD2Q6PL18 1390 aa22.37■■□□□ 1.17
LTBP4-226ENST00000599724 ZC3H6P61129 1189 aaKnown RBP22.36■■□□□ 1.17
LTBP4-226ENST00000599724 ZNF692Q9BU19 519 aaPredicted RBP22.36■■□□□ 1.17
LTBP4-226ENST00000599724 GLI3P10071 1580 aa22.34■■□□□ 1.17
LTBP4-226ENST00000599724 PHRF1Q9P1Y6 1649 aaKnown RBP22.33■■□□□ 1.17
LTBP4-226ENST00000599724 BRWD3Q6RI45 1802 aa22.33■■□□□ 1.16
LTBP4-226ENST00000599724 A0A0G2JS52 829 aa22.32■■□□□ 1.16
LTBP4-226ENST00000599724 NLRP6P59044 892 aa22.32■■□□□ 1.16
LTBP4-226ENST00000599724 MYT1Q01538 1121 aa22.32■■□□□ 1.16
LTBP4-226ENST00000599724 CHRNA2Q15822 529 aa22.32■■□□□ 1.16
LTBP4-226ENST00000599724 SEPT12Q8IYM1 358 aa22.32■■□□□ 1.16
LTBP4-226ENST00000599724 KIAA0232Q92628 1395 aa22.32■■□□□ 1.16
LTBP4-226ENST00000599724 USP6P35125 1406 aa22.31■■□□□ 1.16
LTBP4-226ENST00000599724 SBNO2Q9Y2G9 1366 aa22.3■■□□□ 1.16
LTBP4-226ENST00000599724 EVA1CP58658 441 aa22.3■■□□□ 1.16
LTBP4-226ENST00000599724 NRAPQ86VF7 1730 aa22.3■■□□□ 1.16
LTBP4-226ENST00000599724 ONECUT3O60422 494 aaPredicted RBP22.29■■□□□ 1.16
LTBP4-226ENST00000599724 SLC24A1O60721 1099 aa22.29■■□□□ 1.16
LTBP4-226ENST00000599724 GCP02774 474 aa22.29■■□□□ 1.16
LTBP4-226ENST00000599724 AKAP12Q02952 1782 aa22.29■■□□□ 1.16
LTBP4-226ENST00000599724 TMC1Q8TDI8 760 aa22.28■■□□□ 1.16
LTBP4-226ENST00000599724 STRN4Q9NRL3 753 aa22.28■■□□□ 1.16
LTBP4-226ENST00000599724 FAM98CQ17RN3 349 aaKnown RBP22.27■■□□□ 1.16
LTBP4-226ENST00000599724 CCDC125Q86Z20 511 aa22.27■■□□□ 1.16
LTBP4-226ENST00000599724 TIMELESSQ9UNS1 1208 aa22.26■■□□□ 1.15
LTBP4-226ENST00000599724 USP19O94966 1318 aa22.26■■□□□ 1.15
LTBP4-226ENST00000599724 CLSPNQ9HAW4 1339 aa22.26■■□□□ 1.15
LTBP4-226ENST00000599724 KTN1Q86UP2 1357 aaKnown RBP22.25■■□□□ 1.15
LTBP4-226ENST00000599724 ST20-MTHFSA0A0A6YYL1 179 aa22.25■■□□□ 1.15
LTBP4-226ENST00000599724 ZBTB7CA1YPR0 619 aa22.25■■□□□ 1.15
LTBP4-226ENST00000599724 SPATA31A5Q5VU36 1347 aa22.25■■□□□ 1.15
LTBP4-226ENST00000599724 TTC21BQ7Z4L5 1316 aa22.25■■□□□ 1.15
LTBP4-226ENST00000599724 SPATA31A7Q8IWB4 1347 aa22.25■■□□□ 1.15
LTBP4-226ENST00000599724 KRT27Q7Z3Y8 459 aa22.24■■□□□ 1.15
LTBP4-226ENST00000599724 HDGFL2Q7Z4V5 671 aaPredicted RBP22.23■■□□□ 1.15
LTBP4-226ENST00000599724 PUS7Q96PZ0 661 aaKnown RBP22.23■■□□□ 1.15
LTBP4-226ENST00000599724 TTC21AQ8NDW8 1320 aa22.23■■□□□ 1.15
LTBP4-226ENST00000599724 CPDO75976 1380 aa22.23■■□□□ 1.15
LTBP4-226ENST00000599724 NRKQ7Z2Y5 1582 aa22.22■■□□□ 1.15
LTBP4-226ENST00000599724 CPSF1Q10570 1443 aaKnown RBP22.21■■□□□ 1.15
LTBP4-226ENST00000599724 SSH2Q76I76 1423 aa22.21■■□□□ 1.15
LTBP4-226ENST00000599724 SF3B2Q13435 895 aaKnown RBP22.2■■□□□ 1.14
LTBP4-226ENST00000599724 KCNH5Q8NCM2 988 aa22.2■■□□□ 1.14
LTBP4-226ENST00000599724 SLC12A5Q9H2X9 1139 aa22.2■■□□□ 1.14
LTBP4-226ENST00000599724 TERF2IPQ9NYB0 399 aa22.2■■□□□ 1.14
LTBP4-226ENST00000599724 USP35Q9P2H5 1018 aa22.2■■□□□ 1.14
LTBP4-226ENST00000599724 PIK3C2AO00443 1686 aa22.2■■□□□ 1.14
LTBP4-226ENST00000599724 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.19■■□□□ 1.14
LTBP4-226ENST00000599724 CCER1Q8TC90 406 aaPredicted RBP22.19■■□□□ 1.14
LTBP4-226ENST00000599724 SPATA31A1Q5TZJ5 1347 aa22.19■■□□□ 1.14
LTBP4-226ENST00000599724 MON2Q7Z3U7 1717 aa22.18■■□□□ 1.14
LTBP4-226ENST00000599724 CAMTA1Q9Y6Y1 1673 aa22.17■■□□□ 1.14
LTBP4-226ENST00000599724 TESK2Q96S53 571 aa22.17■■□□□ 1.14
LTBP4-226ENST00000599724 SOX12O15370 315 aa22.16■■□□□ 1.14
LTBP4-226ENST00000599724 TMF1P82094 1093 aa22.15■■□□□ 1.14
LTBP4-226ENST00000599724 LARP1Q6PKG0 1096 aaKnown RBP22.15■■□□□ 1.14
LTBP4-226ENST00000599724 SLIT3O75094 1523 aa22.15■■□□□ 1.14
LTBP4-226ENST00000599724 LMO7Q8WWI1 1683 aa22.14■■□□□ 1.14
LTBP4-226ENST00000599724 EP400Q96L91 3159 aa22.14■■□□□ 1.14
LTBP4-226ENST00000599724 AATKQ6ZMQ8 1374 aa22.13■■□□□ 1.13
LTBP4-226ENST00000599724 USP47Q96K76 1375 aa22.13■■□□□ 1.13
LTBP4-226ENST00000599724 RGPD5Q99666 1765 aa22.13■■□□□ 1.13
LTBP4-226ENST00000599724 TCP11L2Q8N4U5 519 aa22.13■■□□□ 1.13
LTBP4-226ENST00000599724 BLMP54132 1417 aaPredicted RBP22.13■■□□□ 1.13
LTBP4-226ENST00000599724 BARGINQ6ZT62 677 aa22.12■■□□□ 1.13
LTBP4-226ENST00000599724 THRAP3Q9Y2W1 955 aaKnown RBP22.12■■□□□ 1.13
LTBP4-226ENST00000599724 ARHGEF25Q86VW2 580 aa22.11■■□□□ 1.13
LTBP4-226ENST00000599724 NINLQ9Y2I6 1382 aa22.11■■□□□ 1.13
LTBP4-226ENST00000599724 PDE3BQ13370 1112 aa22.1■■□□□ 1.13
LTBP4-226ENST00000599724 CDCA8Q53HL2 280 aa22.1■■□□□ 1.13
LTBP4-226ENST00000599724 NME9Q86XW9 330 aa22.1■■□□□ 1.13
LTBP4-226ENST00000599724 CD163L1Q9NR16 1453 aa22.09■■□□□ 1.13
LTBP4-226ENST00000599724 EDC4Q6P2E9 1401 aaKnown RBP22.09■■□□□ 1.13
LTBP4-226ENST00000599724 FAM182BQ5T319 152 aa22.09■■□□□ 1.13
LTBP4-226ENST00000599724 TOM1L2Q6ZVM7 507 aa22.09■■□□□ 1.13
LTBP4-226ENST00000599724 ZRANB1Q9UGI0 708 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms