RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 HIRIP3Q9BW71 556 aaPredicted RBP22.12■■□□□ 1.13
XRCC1-209ENST00000599693 PSDA5PKW4 1024 aaPredicted RBP22.11■■□□□ 1.13
XRCC1-209ENST00000599693 TRAK1Q9UPV9 953 aa22.11■■□□□ 1.13
XRCC1-209ENST00000599693 SPATA31A5Q5VU36 1347 aa22.09■■□□□ 1.13
XRCC1-209ENST00000599693 SPATA31A7Q8IWB4 1347 aa22.09■■□□□ 1.13
XRCC1-209ENST00000599693 MINK1Q8N4C8 1332 aaPredicted RBP22.09■■□□□ 1.13
XRCC1-209ENST00000599693 HRCP23327 699 aa22.09■■□□□ 1.13
XRCC1-209ENST00000599693 TNS1Q9HBL0 1735 aaKnown RBP22.09■■□□□ 1.13
XRCC1-209ENST00000599693 DISP2A7MBM2 1401 aa22.07■■□□□ 1.12
XRCC1-209ENST00000599693 ITSN1Q15811 1721 aa22.07■■□□□ 1.12
XRCC1-209ENST00000599693 WASLO00401 505 aaPredicted RBP22.07■■□□□ 1.12
XRCC1-209ENST00000599693 EN1Q05925 392 aaPredicted RBP22.06■■□□□ 1.12
XRCC1-209ENST00000599693 NGDNQ8NEJ9 315 aaKnown RBP22.05■■□□□ 1.12
XRCC1-209ENST00000599693 FAM182BQ5T319 152 aa22.04■■□□□ 1.12
XRCC1-209ENST00000599693 PRDM11Q9NQV5 511 aa22.04■■□□□ 1.12
XRCC1-209ENST00000599693 PHRF1Q9P1Y6 1649 aaKnown RBP22.04■■□□□ 1.12
XRCC1-209ENST00000599693 ATP7BP35670 1465 aa22.03■■□□□ 1.12
XRCC1-209ENST00000599693 ARHGEF28Q8N1W1 1705 aaKnown RBP22.03■■□□□ 1.12
XRCC1-209ENST00000599693 RAB3GAP2Q9H2M9 1393 aa22.03■■□□□ 1.12
XRCC1-209ENST00000599693 PAK3O75914 559 aaPredicted RBP22.03■■□□□ 1.12
XRCC1-209ENST00000599693 KDM2AQ9Y2K7 1162 aa22.01■■□□□ 1.11
XRCC1-209ENST00000599693 SPATA31A1Q5TZJ5 1347 aa22.01■■□□□ 1.11
XRCC1-209ENST00000599693 KIAA0232Q92628 1395 aa22■■□□□ 1.11
XRCC1-209ENST00000599693 R3HDM1Q15032 1099 aaKnown RBP21.99■■□□□ 1.11
XRCC1-209ENST00000599693 DCAF11Q8TEB1 546 aa21.99■■□□□ 1.11
XRCC1-209ENST00000599693 STAC3Q96MF2 364 aa21.98■■□□□ 1.11
XRCC1-209ENST00000599693 TOPAZ1Q8N9V7 1692 aa21.97■■□□□ 1.11
XRCC1-209ENST00000599693 CHRNA2Q15822 529 aa21.96■■□□□ 1.11
XRCC1-209ENST00000599693 EZH2Q15910 746 aaKnown RBP21.96■■□□□ 1.11
XRCC1-209ENST00000599693 NUDT16Q96DE0 195 aaKnown RBP21.96■■□□□ 1.11
XRCC1-209ENST00000599693 FAM196AQ6ZSG2 479 aa21.95■■□□□ 1.1
XRCC1-209ENST00000599693 TRIM37O94972 964 aa21.94■■□□□ 1.1
XRCC1-209ENST00000599693 STRN4Q9NRL3 753 aa21.94■■□□□ 1.1
XRCC1-209ENST00000599693 PARD3Q8TEW0 1356 aa21.94■■□□□ 1.1
XRCC1-209ENST00000599693 NRKQ7Z2Y5 1582 aa21.94■■□□□ 1.1
XRCC1-209ENST00000599693 POLR3AO14802 1390 aaPredicted RBP21.93■■□□□ 1.1
XRCC1-209ENST00000599693 RREB1Q92766 1687 aa21.93■■□□□ 1.1
XRCC1-209ENST00000599693 CAMKK2Q96RR4 588 aa21.93■■□□□ 1.1
XRCC1-209ENST00000599693 SSH2Q76I76 1423 aa21.92■■□□□ 1.1
XRCC1-209ENST00000599693 ZC3H6P61129 1189 aaKnown RBP21.92■■□□□ 1.1
XRCC1-209ENST00000599693 NUTM2GQ5VZR2 741 aa21.9■■□□□ 1.1
XRCC1-209ENST00000599693 LMO7Q8WWI1 1683 aa21.9■■□□□ 1.1
XRCC1-209ENST00000599693 NUP188Q5SRE5 1749 aa21.89■■□□□ 1.1
XRCC1-209ENST00000599693 ACEP12821 1306 aa21.89■■□□□ 1.1
XRCC1-209ENST00000599693 APBA3O96018 575 aa21.89■■□□□ 1.09
XRCC1-209ENST00000599693 BARGINQ6ZT62 677 aa21.89■■□□□ 1.09
XRCC1-209ENST00000599693 CDK19Q9BWU1 502 aa21.89■■□□□ 1.09
XRCC1-209ENST00000599693 USP35Q9P2H5 1018 aa21.88■■□□□ 1.09
XRCC1-209ENST00000599693 CAMTA1Q9Y6Y1 1673 aa21.88■■□□□ 1.09
XRCC1-209ENST00000599693 CPDO75976 1380 aa21.87■■□□□ 1.09
XRCC1-209ENST00000599693 KIAA1210Q9ULL0 1709 aa21.87■■□□□ 1.09
XRCC1-209ENST00000599693 EVA1CP58658 441 aa21.87■■□□□ 1.09
XRCC1-209ENST00000599693 PDE3BQ13370 1112 aa21.86■■□□□ 1.09
XRCC1-209ENST00000599693 NBPF8Q3BBV2 869 aa21.86■■□□□ 1.09
XRCC1-209ENST00000599693 CCDC61Q9Y6R9 512 aa21.86■■□□□ 1.09
XRCC1-209ENST00000599693 USP19O94966 1318 aa21.85■■□□□ 1.09
XRCC1-209ENST00000599693 PLEKHG3A1L390 1219 aa21.85■■□□□ 1.09
XRCC1-209ENST00000599693 PARP4Q9UKK3 1724 aaKnown RBP21.84■■□□□ 1.09
XRCC1-209ENST00000599693 LARP1Q6PKG0 1096 aaKnown RBP21.84■■□□□ 1.09
XRCC1-209ENST00000599693 TCP11L2Q8N4U5 519 aa21.84■■□□□ 1.09
XRCC1-209ENST00000599693 ABTB2Q8N961 1025 aa21.83■■□□□ 1.09
XRCC1-209ENST00000599693 THRAP3Q9Y2W1 955 aaKnown RBP21.81■■□□□ 1.08
XRCC1-209ENST00000599693 COL5A2P05997 1499 aaPredicted RBP21.8■■□□□ 1.08
XRCC1-209ENST00000599693 NBPF14Q5TI25 921 aa21.79■■□□□ 1.08
XRCC1-209ENST00000599693 NLRP13Q86W25 1043 aa21.78■■□□□ 1.08
XRCC1-209ENST00000599693 PPIP5K1Q6PFW1 1433 aa21.78■■□□□ 1.08
XRCC1-209ENST00000599693 GCP02774 474 aa21.77■■□□□ 1.08
XRCC1-209ENST00000599693 PEAK1Q9H792 1746 aa21.77■■□□□ 1.08
XRCC1-209ENST00000599693 RGPD3A6NKT7 1758 aaPredicted RBP21.76■■□□□ 1.07
XRCC1-209ENST00000599693 RGPD4Q7Z3J3 1758 aa21.76■■□□□ 1.07
XRCC1-209ENST00000599693 BRD4O60885 1362 aaPredicted RBP21.75■■□□□ 1.07
XRCC1-209ENST00000599693 CRB1P82279 1406 aa21.75■■□□□ 1.07
XRCC1-209ENST00000599693 C11orf95C9JLR9 678 aaPredicted RBP21.75■■□□□ 1.07
XRCC1-209ENST00000599693 OVOS2A0A0G2JMS6 1433 aa21.74■■□□□ 1.07
XRCC1-209ENST00000599693 OVOS2A0A0J9YW53 1432 aa21.74■■□□□ 1.07
XRCC1-209ENST00000599693 OVOS2Q6IE36 1432 aa21.74■■□□□ 1.07
XRCC1-209ENST00000599693 LRRC37A3O60309 1634 aa21.74■■□□□ 1.07
XRCC1-209ENST00000599693 SRPK2P78362 688 aaKnown RBP21.74■■□□□ 1.07
XRCC1-209ENST00000599693 QRICH2Q9H0J4 1663 aa21.73■■□□□ 1.07
XRCC1-209ENST00000599693 SLIT3O75094 1523 aa21.73■■□□□ 1.07
XRCC1-209ENST00000599693 SBF2Q86WG5 1849 aa21.73■■□□□ 1.07
XRCC1-209ENST00000599693 NBPF1Q3BBV0 1214 aa21.72■■□□□ 1.07
XRCC1-209ENST00000599693 CENPJQ9HC77 1338 aaPredicted RBP21.72■■□□□ 1.07
XRCC1-209ENST00000599693 WNK3Q9BYP7 1800 aa21.71■■□□□ 1.07
XRCC1-209ENST00000599693 SPON1Q9HCB6 807 aa21.71■■□□□ 1.07
XRCC1-209ENST00000599693 AATKQ6ZMQ8 1374 aa21.71■■□□□ 1.07
XRCC1-209ENST00000599693 USP6P35125 1406 aa21.71■■□□□ 1.07
XRCC1-209ENST00000599693 CABP2Q9NPB3 220 aa21.7■■□□□ 1.06
XRCC1-209ENST00000599693 PPP1R1BQ9UD71 204 aaPredicted RBP21.7■■□□□ 1.06
XRCC1-209ENST00000599693 KCNQ2O43526 872 aa21.69■■□□□ 1.06
XRCC1-209ENST00000599693 YY1P25490 414 aa21.69■■□□□ 1.06
XRCC1-209ENST00000599693 NINLQ9Y2I6 1382 aa21.69■■□□□ 1.06
XRCC1-209ENST00000599693 PIK3C2AO00443 1686 aa21.69■■□□□ 1.06
XRCC1-209ENST00000599693 COL18A1P39060 1754 aa21.69■■□□□ 1.06
XRCC1-209ENST00000599693 ZBTB7CA1YPR0 619 aa21.68■■□□□ 1.06
XRCC1-209ENST00000599693 NLRP6P59044 892 aa21.67■■□□□ 1.06
XRCC1-209ENST00000599693 CASZ1Q86V15 1759 aa21.66■■□□□ 1.06
XRCC1-209ENST00000599693 DDB1Q16531 1140 aa21.66■■□□□ 1.06
XRCC1-209ENST00000599693 PLSCR1O15162 318 aa21.65■■□□□ 1.06
XRCC1-209ENST00000599693 CABP1Q9NZU7 370 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms