RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 SLC4A2P04920 1241 aa18.16■□□□□ 0.5
SYMPK-213ENST00000599460 UHRF1BP1LA0JNW5 1464 aa18.16■□□□□ 0.5
SYMPK-213ENST00000599460 HDGFL1Q5TGJ6 251 aa18.15■□□□□ 0.5
SYMPK-213ENST00000599460 DNMT1P26358 1616 aaKnown RBP18.15■□□□□ 0.5
SYMPK-213ENST00000599460 FOXO3O43524 673 aa18.15■□□□□ 0.5
SYMPK-213ENST00000599460 TMPOP42166 694 aaKnown RBP18.14■□□□□ 0.49
SYMPK-213ENST00000599460 NFE2L2Q16236 605 aa18.14■□□□□ 0.49
SYMPK-213ENST00000599460 RUFY2Q8WXA3 655 aa18.14■□□□□ 0.49
SYMPK-213ENST00000599460 LRRFIP1Q32MZ4 808 aaKnown RBP18.14■□□□□ 0.49
SYMPK-213ENST00000599460 GNAI3P08754 354 aa18.13■□□□□ 0.49
SYMPK-213ENST00000599460 EMILIN1Q9Y6C2 1016 aa18.13■□□□□ 0.49
SYMPK-213ENST00000599460 PTMSP20962 102 aa18.13■□□□□ 0.49
SYMPK-213ENST00000599460 WWC1Q8IX03 1113 aa18.13■□□□□ 0.49
SYMPK-213ENST00000599460 GOLGA6L6A8MZA4 724 aa18.12■□□□□ 0.49
SYMPK-213ENST00000599460 PDE3AQ14432 1141 aa18.12■□□□□ 0.49
SYMPK-213ENST00000599460 RALGAPBQ86X10 1494 aa18.12■□□□□ 0.49
SYMPK-213ENST00000599460 HTATSF1O43719 755 aaKnown RBP18.12■□□□□ 0.49
SYMPK-213ENST00000599460 RIMS2Q9UQ26 1411 aa18.12■□□□□ 0.49
SYMPK-213ENST00000599460 REC8O95072 547 aa18.12■□□□□ 0.49
SYMPK-213ENST00000599460 VPS37DQ86XT2 251 aa18.12■□□□□ 0.49
SYMPK-213ENST00000599460 DCAF8L1A6NGE4 600 aa18.11■□□□□ 0.49
SYMPK-213ENST00000599460 CT47B1P0C2W7 299 aaPredicted RBP18.11■□□□□ 0.49
SYMPK-213ENST00000599460 PRAG1Q86YV5 1406 aa18.11■□□□□ 0.49
SYMPK-213ENST00000599460 DNTTIP2Q5QJE6 756 aaKnown RBP18.11■□□□□ 0.49
SYMPK-213ENST00000599460 KIF6Q6ZMV9 814 aa18.11■□□□□ 0.49
SYMPK-213ENST00000599460 C1orf115Q9H7X2 142 aa18.1■□□□□ 0.49
SYMPK-213ENST00000599460 BTBD11A6QL63 1104 aa18.1■□□□□ 0.49
SYMPK-213ENST00000599460 GNAT3A8MTJ3 354 aa18.1■□□□□ 0.49
SYMPK-213ENST00000599460 NEUROD6Q96NK8 337 aa18.1■□□□□ 0.49
SYMPK-213ENST00000599460 GZF1Q9H116 711 aaPredicted RBP18.1■□□□□ 0.49
SYMPK-213ENST00000599460 ERC2O15083 957 aa18.09■□□□□ 0.49
SYMPK-213ENST00000599460 NINLQ9Y2I6 1382 aa18.08■□□□□ 0.49
SYMPK-213ENST00000599460 FAM177BA6PVY3 158 aa18.08■□□□□ 0.48
SYMPK-213ENST00000599460 SLC4A3P48751 1232 aa18.08■□□□□ 0.48
SYMPK-213ENST00000599460 SLFN5Q08AF3 891 aa18.08■□□□□ 0.48
SYMPK-213ENST00000599460 ACEP12821 1306 aa18.07■□□□□ 0.48
SYMPK-213ENST00000599460 USHBP1Q8N6Y0 703 aa18.07■□□□□ 0.48
SYMPK-213ENST00000599460 THUMPD2Q9BTF0 503 aaKnown RBP18.07■□□□□ 0.48
SYMPK-213ENST00000599460 SURF6O75683 361 aaKnown RBP18.07■□□□□ 0.48
SYMPK-213ENST00000599460 FOXD4L5Q5VV16 416 aaPredicted RBP18.07■□□□□ 0.48
SYMPK-213ENST00000599460 MCM10Q7L590 875 aa18.07■□□□□ 0.48
SYMPK-213ENST00000599460 FOXD4L4Q8WXT5 416 aaPredicted RBP18.07■□□□□ 0.48
SYMPK-213ENST00000599460 ANO2Q9NQ90 1003 aa18.07■□□□□ 0.48
SYMPK-213ENST00000599460 NSD2O96028 1365 aa18.06■□□□□ 0.48
SYMPK-213ENST00000599460 INTS3Q68E01 1043 aaKnown RBP18.06■□□□□ 0.48
SYMPK-213ENST00000599460 ATP7AQ04656 1500 aa18.06■□□□□ 0.48
SYMPK-213ENST00000599460 L1TD1Q5T7N2 865 aaKnown RBP18.06■□□□□ 0.48
SYMPK-213ENST00000599460 ATF7IPQ6VMQ6 1270 aa18.06■□□□□ 0.48
SYMPK-213ENST00000599460 GNAI2P04899 355 aa18.06■□□□□ 0.48
SYMPK-213ENST00000599460 MYL6BP14649 208 aa18.06■□□□□ 0.48
SYMPK-213ENST00000599460 ZKSCAN1P17029 563 aaPredicted RBP18.06■□□□□ 0.48
SYMPK-213ENST00000599460 APPP05067 770 aa18.06■□□□□ 0.48
SYMPK-213ENST00000599460 KRT28Q7Z3Y7 464 aa18.05■□□□□ 0.48
SYMPK-213ENST00000599460 NOL10Q9BSC4 688 aaKnown RBP18.05■□□□□ 0.48
SYMPK-213ENST00000599460 MIS18AQ9NYP9 233 aa18.05■□□□□ 0.48
SYMPK-213ENST00000599460 ZMYM3Q14202 1370 aa18.05■□□□□ 0.48
SYMPK-213ENST00000599460 CCT4P50991 539 aaKnown RBP18.05■□□□□ 0.48
SYMPK-213ENST00000599460 DCTN1Q14203 1278 aa18.05■□□□□ 0.48
SYMPK-213ENST00000599460 KIF3AQ9Y496 699 aa18.05■□□□□ 0.48
SYMPK-213ENST00000599460 PHF23Q9BUL5 403 aaPredicted RBP18.04■□□□□ 0.48
SYMPK-213ENST00000599460 PZPP20742 1482 aa18.04■□□□□ 0.48
SYMPK-213ENST00000599460 MAGI3Q5TCQ9 1506 aa18.03■□□□□ 0.48
SYMPK-213ENST00000599460 SYAP1Q96A49 352 aaPredicted RBP18.03■□□□□ 0.48
SYMPK-213ENST00000599460 ADGRL2O95490 1459 aa18.03■□□□□ 0.48
SYMPK-213ENST00000599460 FBXW7Q969H0 707 aa18.03■□□□□ 0.48
SYMPK-213ENST00000599460 ZNF428Q96B54 188 aa18.03■□□□□ 0.48
SYMPK-213ENST00000599460 SRCIN1Q9C0H9 1055 aa18.03■□□□□ 0.48
SYMPK-213ENST00000599460 CLASRPQ8N2M8 674 aaKnown RBP18.02■□□□□ 0.48
SYMPK-213ENST00000599460 NRDCO43847 1150 aa18.02■□□□□ 0.48
SYMPK-213ENST00000599460 CSPP1Q1MSJ5 1256 aa18.02■□□□□ 0.48
SYMPK-213ENST00000599460 DRC7Q8IY82 874 aa18.02■□□□□ 0.48
SYMPK-213ENST00000599460 PDZRN3Q9UPQ7 1066 aa18.02■□□□□ 0.48
SYMPK-213ENST00000599460 DMRT2Q9Y5R5 561 aa18.02■□□□□ 0.48
SYMPK-213ENST00000599460 LRPPRCP42704 1394 aaKnown RBP18.02■□□□□ 0.48
SYMPK-213ENST00000599460 MVPQ14764 893 aaKnown RBP18.02■□□□□ 0.47
SYMPK-213ENST00000599460 EIF2AK4Q9P2K8 1649 aaKnown RBP18.01■□□□□ 0.47
SYMPK-213ENST00000599460 ATP10AO60312 1499 aa18.01■□□□□ 0.47
SYMPK-213ENST00000599460 AMOTL1Q8IY63 956 aa18.01■□□□□ 0.47
SYMPK-213ENST00000599460 H3BQV1 296 aa18.01■□□□□ 0.47
SYMPK-213ENST00000599460 IFFO2Q5TF58 517 aa18.01■□□□□ 0.47
SYMPK-213ENST00000599460 MAST1Q9Y2H9 1570 aa18■□□□□ 0.47
SYMPK-213ENST00000599460 RNF20Q5VTR2 975 aa18■□□□□ 0.47
SYMPK-213ENST00000599460 FAM184AQ8NB25 1140 aa18■□□□□ 0.47
SYMPK-213ENST00000599460 GCC1Q96CN9 775 aa18■□□□□ 0.47
SYMPK-213ENST00000599460 CDC45O75419 566 aa18■□□□□ 0.47
SYMPK-213ENST00000599460 IFT57Q9NWB7 429 aa18■□□□□ 0.47
SYMPK-213ENST00000599460 ANKRD36BQ8N2N9 1353 aa18■□□□□ 0.47
SYMPK-213ENST00000599460 CADPS2Q86UW7 1296 aa17.99■□□□□ 0.47
SYMPK-213ENST00000599460 SYNE3Q6ZMZ3 975 aa17.99■□□□□ 0.47
SYMPK-213ENST00000599460 PPIP5K1Q6PFW1 1433 aa17.99■□□□□ 0.47
SYMPK-213ENST00000599460 AMOTQ4VCS5 1084 aa17.99■□□□□ 0.47
SYMPK-213ENST00000599460 DEKP35659 375 aaKnown RBP17.98■□□□□ 0.47
SYMPK-213ENST00000599460 DUSP27Q5VZP5 1158 aa17.98■□□□□ 0.47
SYMPK-213ENST00000599460 CHMP4CQ96CF2 233 aa17.98■□□□□ 0.47
SYMPK-213ENST00000599460 TTC21BQ7Z4L5 1316 aa17.97■□□□□ 0.47
SYMPK-213ENST00000599460 FBLN1P23142 703 aa17.97■□□□□ 0.47
SYMPK-213ENST00000599460 ABCC11Q96J66 1382 aa17.97■□□□□ 0.47
SYMPK-213ENST00000599460 ADAMTS2O95450 1211 aa17.97■□□□□ 0.47
SYMPK-213ENST00000599460 WASHC4Q2M389 1173 aa17.97■□□□□ 0.47
SYMPK-213ENST00000599460 CNTROBQ8N137 903 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms