RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 CLTCL1P53675 1640 aa14.06□□□□□ -0.16
ZNF544-213ENST00000599227 UNC13BO14795 1591 aa14.06□□□□□ -0.16
ZNF544-213ENST00000599227 MCM10Q7L590 875 aa14.06□□□□□ -0.16
ZNF544-213ENST00000599227 POLR3AO14802 1390 aaPredicted RBP14.06□□□□□ -0.16
ZNF544-213ENST00000599227 DDX19BQ9UMR2 479 aa14.05□□□□□ -0.16
ZNF544-213ENST00000599227 CHD1O14646 1710 aa14.05□□□□□ -0.16
ZNF544-213ENST00000599227 SULT6B1Q6IMI4 303 aa14.05□□□□□ -0.16
ZNF544-213ENST00000599227 USHBP1Q8N6Y0 703 aa14.05□□□□□ -0.16
ZNF544-213ENST00000599227 PTPRTO14522 1441 aa14.05□□□□□ -0.16
ZNF544-213ENST00000599227 CD109Q6YHK3 1445 aa14.05□□□□□ -0.16
ZNF544-213ENST00000599227 COG3Q96JB2 828 aa14.04□□□□□ -0.16
ZNF544-213ENST00000599227 NAP1L5Q96NT1 182 aaPredicted RBP14.04□□□□□ -0.16
ZNF544-213ENST00000599227 GOLGA6L3A6NEY3 463 aa14.04□□□□□ -0.16
ZNF544-213ENST00000599227 MADDQ8WXG6 1647 aa14.04□□□□□ -0.16
ZNF544-213ENST00000599227 FYB1O15117 783 aa14.03□□□□□ -0.16
ZNF544-213ENST00000599227 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
ZNF544-213ENST00000599227 RTF1Q92541 710 aaKnown RBP14.03□□□□□ -0.16
ZNF544-213ENST00000599227 TSPYL6Q8N831 410 aa14.02□□□□□ -0.16
ZNF544-213ENST00000599227 TRIM35Q9UPQ4 493 aa14.02□□□□□ -0.16
ZNF544-213ENST00000599227 IPO8O15397 1037 aaKnown RBP14.02□□□□□ -0.17
ZNF544-213ENST00000599227 TRAK2O60296 914 aa14.02□□□□□ -0.17
ZNF544-213ENST00000599227 MCM4P33991 863 aa14.01□□□□□ -0.17
ZNF544-213ENST00000599227 AEBP1Q8IUX7 1158 aa14.01□□□□□ -0.17
ZNF544-213ENST00000599227 PHACTR3Q96KR7 559 aa14.01□□□□□ -0.17
ZNF544-213ENST00000599227 ABCC1P33527 1531 aa14.01□□□□□ -0.17
ZNF544-213ENST00000599227 NPC1L1Q9UHC9 1359 aa14.01□□□□□ -0.17
ZNF544-213ENST00000599227 SYNMO15061 1565 aa14□□□□□ -0.17
ZNF544-213ENST00000599227 ATAD2Q6PL18 1390 aa14□□□□□ -0.17
ZNF544-213ENST00000599227 TSHZ3Q63HK5 1081 aa14□□□□□ -0.17
ZNF544-213ENST00000599227 ASXL2Q76L83 1435 aa13.99□□□□□ -0.17
ZNF544-213ENST00000599227 NLRP6P59044 892 aa13.99□□□□□ -0.17
ZNF544-213ENST00000599227 CHMP5Q9NZZ3 219 aa13.99□□□□□ -0.17
ZNF544-213ENST00000599227 TRPM2O94759 1503 aa13.99□□□□□ -0.17
ZNF544-213ENST00000599227 A0A1W2PP64 1363 aa13.99□□□□□ -0.17
ZNF544-213ENST00000599227 OS9Q13438 667 aaPredicted RBP13.99□□□□□ -0.17
ZNF544-213ENST00000599227 ATP7AQ04656 1500 aa13.99□□□□□ -0.17
ZNF544-213ENST00000599227 KDM5AP29375 1690 aaKnown RBP13.99□□□□□ -0.17
ZNF544-213ENST00000599227 F6X3S4 739 aa13.98□□□□□ -0.17
ZNF544-213ENST00000599227 HAP1P54257 671 aaPredicted RBP13.98□□□□□ -0.17
ZNF544-213ENST00000599227 L1TD1Q5T7N2 865 aaKnown RBP13.98□□□□□ -0.17
ZNF544-213ENST00000599227 SMARCA5O60264 1052 aaPredicted RBP13.98□□□□□ -0.17
ZNF544-213ENST00000599227 ARID3AQ99856 593 aa13.98□□□□□ -0.17
ZNF544-213ENST00000599227 PLXNC1O60486 1568 aa13.98□□□□□ -0.17
ZNF544-213ENST00000599227 ZCCHC11Q5TAX3 1644 aaKnown RBP13.97□□□□□ -0.17
ZNF544-213ENST00000599227 TRIM6-TRIM34B2RNG4 842 aa13.97□□□□□ -0.17
ZNF544-213ENST00000599227 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.97□□□□□ -0.17
ZNF544-213ENST00000599227 CHD1LQ86WJ1 897 aa13.97□□□□□ -0.17
ZNF544-213ENST00000599227 RRAGDQ9NQL2 400 aaPredicted RBP13.97□□□□□ -0.17
ZNF544-213ENST00000599227 XRCC6P12956 609 aaKnown RBP eCLIP13.97□□□□□ -0.17
ZNF544-213ENST00000599227 ANXA1P04083 346 aa13.96□□□□□ -0.17
ZNF544-213ENST00000599227 FOXO3O43524 673 aa13.96□□□□□ -0.17
ZNF544-213ENST00000599227 RILPL2Q969X0 211 aa13.96□□□□□ -0.17
ZNF544-213ENST00000599227 MAP4K4O95819 1239 aaPredicted RBP13.96□□□□□ -0.18
ZNF544-213ENST00000599227 PLCB2Q00722 1185 aa13.96□□□□□ -0.18
ZNF544-213ENST00000599227 ANTXR1Q9H6X2 564 aa13.96□□□□□ -0.18
ZNF544-213ENST00000599227 ZFYVE16Q7Z3T8 1539 aa13.95□□□□□ -0.18
ZNF544-213ENST00000599227 NPATQ14207 1427 aa13.95□□□□□ -0.18
ZNF544-213ENST00000599227 C16orf71Q8IYS4 520 aaPredicted RBP13.95□□□□□ -0.18
ZNF544-213ENST00000599227 HSP90AB2PQ58FF8 381 aa13.94□□□□□ -0.18
ZNF544-213ENST00000599227 NUDT16Q96DE0 195 aaKnown RBP13.94□□□□□ -0.18
ZNF544-213ENST00000599227 RTEL1-TNFRSF6BF6WH68 1400 aa13.94□□□□□ -0.18
ZNF544-213ENST00000599227 AIMP1Q12904 312 aaKnown RBP13.94□□□□□ -0.18
ZNF544-213ENST00000599227 TRIM44Q96DX7 344 aaPredicted RBP13.94□□□□□ -0.18
ZNF544-213ENST00000599227 NINLQ9Y2I6 1382 aa13.94□□□□□ -0.18
ZNF544-213ENST00000599227 TWISTNBQ3B726 338 aaPredicted RBP13.93□□□□□ -0.18
ZNF544-213ENST00000599227 ZBTB40Q9NUA8 1239 aa13.93□□□□□ -0.18
ZNF544-213ENST00000599227 KIF16BQ96L93 1317 aa13.93□□□□□ -0.18
ZNF544-213ENST00000599227 ANKRD36BQ8N2N9 1353 aa13.93□□□□□ -0.18
ZNF544-213ENST00000599227 SPHKAPQ2M3C7 1700 aa13.93□□□□□ -0.18
ZNF544-213ENST00000599227 ABCA6Q8N139 1617 aa13.93□□□□□ -0.18
ZNF544-213ENST00000599227 DDX54Q8TDD1 881 aaKnown RBP13.93□□□□□ -0.18
ZNF544-213ENST00000599227 IQGAP1P46940 1657 aa13.92□□□□□ -0.18
ZNF544-213ENST00000599227 CD2BP2O95400 341 aaKnown RBP13.92□□□□□ -0.18
ZNF544-213ENST00000599227 CSB-PGBD3P0DP91 1061 aa13.92□□□□□ -0.18
ZNF544-213ENST00000599227 MPNDQ8N594 471 aa13.92□□□□□ -0.18
ZNF544-213ENST00000599227 PLEKHF1Q96S99 279 aa13.92□□□□□ -0.18
ZNF544-213ENST00000599227 FKBP5Q13451 457 aaPredicted RBP13.92□□□□□ -0.18
ZNF544-213ENST00000599227 C8orf58Q8NAV2 365 aa13.92□□□□□ -0.18
ZNF544-213ENST00000599227 LARP6Q9BRS8 491 aaKnown RBP13.92□□□□□ -0.18
ZNF544-213ENST00000599227 CCDC27Q2M243 656 aa13.92□□□□□ -0.18
ZNF544-213ENST00000599227 PNNQ9H307 717 aaKnown RBP13.92□□□□□ -0.18
ZNF544-213ENST00000599227 TNPO1Q92973 898 aaKnown RBP13.91□□□□□ -0.18
ZNF544-213ENST00000599227 POLKQ9UBT6 870 aa13.91□□□□□ -0.18
ZNF544-213ENST00000599227 EID1Q9Y6B2 187 aa13.91□□□□□ -0.18
ZNF544-213ENST00000599227 ABTB2Q8N961 1025 aa13.91□□□□□ -0.18
ZNF544-213ENST00000599227 TSPYL4Q9UJ04 414 aa13.91□□□□□ -0.18
ZNF544-213ENST00000599227 LAMC1P11047 1609 aa13.91□□□□□ -0.18
ZNF544-213ENST00000599227 SLC4A2P04920 1241 aa13.91□□□□□ -0.18
ZNF544-213ENST00000599227 MBIPQ9NS73 344 aa13.91□□□□□ -0.18
ZNF544-213ENST00000599227 NAP1L2Q9ULW6 460 aaPredicted RBP13.91□□□□□ -0.18
ZNF544-213ENST00000599227 RNF17Q9BXT8 1623 aaKnown RBP13.9□□□□□ -0.18
ZNF544-213ENST00000599227 SSFA2P28290 1259 aa13.9□□□□□ -0.18
ZNF544-213ENST00000599227 TBC1D9Q6ZT07 1266 aa13.9□□□□□ -0.18
ZNF544-213ENST00000599227 FAM43AQ8N2R8 423 aa13.9□□□□□ -0.18
ZNF544-213ENST00000599227 OTUD7AQ8TE49 926 aaPredicted RBP13.9□□□□□ -0.18
ZNF544-213ENST00000599227 ZNF518AQ6AHZ1 1483 aa13.9□□□□□ -0.18
ZNF544-213ENST00000599227 SMC5Q8IY18 1101 aa13.89□□□□□ -0.19
ZNF544-213ENST00000599227 HDAC1Q13547 482 aaPredicted RBP13.89□□□□□ -0.19
ZNF544-213ENST00000599227 CHAMP1Q96JM3 812 aa13.89□□□□□ -0.19
ZNF544-213ENST00000599227 MAP3K4Q9Y6R4 1608 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms