RNA–Protein interactions for RNA: ENST00000598812.5

ARHGEF1-217, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-217ENST00000598812 QRICH2Q9H0J4 1663 aa28.32■■■□□ 2.12
ARHGEF1-217ENST00000598812 GJD4Q96KN9 370 aaPredicted RBP28.3■■■□□ 2.12
ARHGEF1-217ENST00000598812 POLR3AO14802 1390 aaPredicted RBP28.28■■■□□ 2.12
ARHGEF1-217ENST00000598812 ACEP12821 1306 aa28.28■■■□□ 2.12
ARHGEF1-217ENST00000598812 PLEKHG3A1L390 1219 aa28.27■■■□□ 2.12
ARHGEF1-217ENST00000598812 PLCH1Q4KWH8 1693 aa28.26■■■□□ 2.12
ARHGEF1-217ENST00000598812 NBPF8Q3BBV2 869 aa28.26■■■□□ 2.11
ARHGEF1-217ENST00000598812 CABP2Q9NPB3 220 aa28.26■■■□□ 2.11
ARHGEF1-217ENST00000598812 ZRANB1Q9UGI0 708 aa28.26■■■□□ 2.11
ARHGEF1-217ENST00000598812 TONSLQ96HA7 1378 aa28.25■■■□□ 2.11
ARHGEF1-217ENST00000598812 NWD2Q9ULI1 1742 aa28.25■■■□□ 2.11
ARHGEF1-217ENST00000598812 FAM83GA6ND36 823 aa28.24■■■□□ 2.11
ARHGEF1-217ENST00000598812 PPIP5K1Q6PFW1 1433 aa28.24■■■□□ 2.11
ARHGEF1-217ENST00000598812 RALGAPBQ86X10 1494 aa28.23■■■□□ 2.11
ARHGEF1-217ENST00000598812 EVC2Q86UK5 1308 aa28.21■■■□□ 2.11
ARHGEF1-217ENST00000598812 VPS72Q15906 364 aa28.21■■■□□ 2.11
ARHGEF1-217ENST00000598812 GLI3P10071 1580 aa28.2■■■□□ 2.11
ARHGEF1-217ENST00000598812 CCDC9Q9Y3X0 531 aaKnown RBP28.2■■■□□ 2.1
ARHGEF1-217ENST00000598812 CRYBG1Q9Y4K1 1723 aa28.2■■■□□ 2.1
ARHGEF1-217ENST00000598812 COL14A1Q05707 1796 aaKnown RBP28.18■■■□□ 2.1
ARHGEF1-217ENST00000598812 NUTM2GQ5VZR2 741 aa28.17■■■□□ 2.1
ARHGEF1-217ENST00000598812 PRDM11Q9NQV5 511 aa28.17■■■□□ 2.1
ARHGEF1-217ENST00000598812 BTG4Q9NY30 223 aa28.17■■■□□ 2.1
ARHGEF1-217ENST00000598812 ABTB2Q8N961 1025 aa28.16■■■□□ 2.1
ARHGEF1-217ENST00000598812 CARD11Q9BXL7 1154 aa28.15■■■□□ 2.1
ARHGEF1-217ENST00000598812 CABP1Q9NZU7 370 aa28.15■■■□□ 2.1
ARHGEF1-217ENST00000598812 LRP5O75197 1615 aa28.14■■■□□ 2.1
ARHGEF1-217ENST00000598812 PHRF1Q9P1Y6 1649 aaKnown RBP28.14■■■□□ 2.09
ARHGEF1-217ENST00000598812 CCDC125Q86Z20 511 aa28.13■■■□□ 2.09
ARHGEF1-217ENST00000598812 NRAPQ86VF7 1730 aa28.12■■■□□ 2.09
ARHGEF1-217ENST00000598812 BRD4O60885 1362 aaPredicted RBP28.11■■■□□ 2.09
ARHGEF1-217ENST00000598812 KIAA0232Q92628 1395 aa28.11■■■□□ 2.09
ARHGEF1-217ENST00000598812 ZC3H6P61129 1189 aaKnown RBP28.09■■■□□ 2.09
ARHGEF1-217ENST00000598812 SEPT12Q8IYM1 358 aa28.09■■■□□ 2.09
ARHGEF1-217ENST00000598812 USP6P35125 1406 aa28.09■■■□□ 2.09
ARHGEF1-217ENST00000598812 BRWD3Q6RI45 1802 aa28.08■■■□□ 2.09
ARHGEF1-217ENST00000598812 NLRP13Q86W25 1043 aa28.08■■■□□ 2.09
ARHGEF1-217ENST00000598812 BLMP54132 1417 aaPredicted RBP28.07■■■□□ 2.08
ARHGEF1-217ENST00000598812 A0A0G2JS52 829 aa28.06■■■□□ 2.08
ARHGEF1-217ENST00000598812 ONECUT3O60422 494 aaPredicted RBP28.06■■■□□ 2.08
ARHGEF1-217ENST00000598812 MYT1Q01538 1121 aa28.06■■■□□ 2.08
ARHGEF1-217ENST00000598812 CHRNA2Q15822 529 aa28.06■■■□□ 2.08
ARHGEF1-217ENST00000598812 SBNO2Q9Y2G9 1366 aa28.06■■■□□ 2.08
ARHGEF1-217ENST00000598812 USP19O94966 1318 aa28.05■■■□□ 2.08
ARHGEF1-217ENST00000598812 NRKQ7Z2Y5 1582 aa28.05■■■□□ 2.08
ARHGEF1-217ENST00000598812 FAM98CQ17RN3 349 aaKnown RBP28.03■■■□□ 2.08
ARHGEF1-217ENST00000598812 SPATA31A5Q5VU36 1347 aa28.02■■■□□ 2.08
ARHGEF1-217ENST00000598812 SPATA31A7Q8IWB4 1347 aa28.02■■■□□ 2.08
ARHGEF1-217ENST00000598812 ZNF692Q9BU19 519 aaPredicted RBP28.01■■■□□ 2.07
ARHGEF1-217ENST00000598812 CPDO75976 1380 aa28■■■□□ 2.07
ARHGEF1-217ENST00000598812 GCP02774 474 aa28■■■□□ 2.07
ARHGEF1-217ENST00000598812 NLRP6P59044 892 aa28■■■□□ 2.07
ARHGEF1-217ENST00000598812 STRN4Q9NRL3 753 aa28■■■□□ 2.07
ARHGEF1-217ENST00000598812 KRT27Q7Z3Y8 459 aa27.99■■■□□ 2.07
ARHGEF1-217ENST00000598812 SSH2Q76I76 1423 aa27.99■■■□□ 2.07
ARHGEF1-217ENST00000598812 EVA1CP58658 441 aa27.97■■■□□ 2.07
ARHGEF1-217ENST00000598812 AKAP12Q02952 1782 aa27.96■■■□□ 2.07
ARHGEF1-217ENST00000598812 SPATA31A1Q5TZJ5 1347 aa27.94■■■□□ 2.06
ARHGEF1-217ENST00000598812 TTC21BQ7Z4L5 1316 aa27.94■■■□□ 2.06
ARHGEF1-217ENST00000598812 PIK3C2AO00443 1686 aa27.94■■■□□ 2.06
ARHGEF1-217ENST00000598812 CPSF1Q10570 1443 aaKnown RBP27.94■■■□□ 2.06
ARHGEF1-217ENST00000598812 DEFB132Q7Z7B7 95 aa27.94■■■□□ 2.06
ARHGEF1-217ENST00000598812 KTN1Q86UP2 1357 aaKnown RBP27.94■■■□□ 2.06
ARHGEF1-217ENST00000598812 TTC21AQ8NDW8 1320 aa27.92■■■□□ 2.06
ARHGEF1-217ENST00000598812 SLIT3O75094 1523 aa27.92■■■□□ 2.06
ARHGEF1-217ENST00000598812 CAMTA1Q9Y6Y1 1673 aa27.92■■■□□ 2.06
ARHGEF1-217ENST00000598812 ZBTB7CA1YPR0 619 aa27.92■■■□□ 2.06
ARHGEF1-217ENST00000598812 LMO7Q8WWI1 1683 aa27.91■■■□□ 2.06
ARHGEF1-217ENST00000598812 TMC1Q8TDI8 760 aa27.91■■■□□ 2.06
ARHGEF1-217ENST00000598812 PCGF6Q9BYE7 350 aa27.91■■■□□ 2.06
ARHGEF1-217ENST00000598812 SF3B2Q13435 895 aaKnown RBP27.9■■■□□ 2.06
ARHGEF1-217ENST00000598812 USP35Q9P2H5 1018 aa27.9■■■□□ 2.06
ARHGEF1-217ENST00000598812 THSD7AQ9UPZ6 1657 aa27.89■■■□□ 2.06
ARHGEF1-217ENST00000598812 ST20-MTHFSA0A0A6YYL1 179 aa27.88■■■□□ 2.05
ARHGEF1-217ENST00000598812 MON2Q7Z3U7 1717 aa27.87■■■□□ 2.05
ARHGEF1-217ENST00000598812 LARP1Q6PKG0 1096 aaKnown RBP27.87■■■□□ 2.05
ARHGEF1-217ENST00000598812 SLC24A1O60721 1099 aa27.86■■■□□ 2.05
ARHGEF1-217ENST00000598812 HDGFL2Q7Z4V5 671 aaPredicted RBP27.86■■■□□ 2.05
ARHGEF1-217ENST00000598812 KCNH5Q8NCM2 988 aa27.86■■■□□ 2.05
ARHGEF1-217ENST00000598812 PUS7Q96PZ0 661 aaKnown RBP27.86■■■□□ 2.05
ARHGEF1-217ENST00000598812 AATKQ6ZMQ8 1374 aa27.86■■■□□ 2.05
ARHGEF1-217ENST00000598812 COL5A2P05997 1499 aaPredicted RBP27.85■■■□□ 2.05
ARHGEF1-217ENST00000598812 CLSPNQ9HAW4 1339 aa27.85■■■□□ 2.05
ARHGEF1-217ENST00000598812 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.84■■■□□ 2.05
ARHGEF1-217ENST00000598812 TESK2Q96S53 571 aa27.84■■■□□ 2.05
ARHGEF1-217ENST00000598812 SLC12A5Q9H2X9 1139 aa27.84■■■□□ 2.05
ARHGEF1-217ENST00000598812 CD163L1Q9NR16 1453 aa27.83■■■□□ 2.05
ARHGEF1-217ENST00000598812 SOX12O15370 315 aa27.83■■■□□ 2.05
ARHGEF1-217ENST00000598812 BARGINQ6ZT62 677 aa27.83■■■□□ 2.05
ARHGEF1-217ENST00000598812 TCP11L2Q8N4U5 519 aa27.83■■■□□ 2.05
ARHGEF1-217ENST00000598812 TERF2IPQ9NYB0 399 aa27.83■■■□□ 2.05
ARHGEF1-217ENST00000598812 TIMELESSQ9UNS1 1208 aa27.82■■■□□ 2.04
ARHGEF1-217ENST00000598812 FAM182BQ5T319 152 aa27.8■■■□□ 2.04
ARHGEF1-217ENST00000598812 THRAP3Q9Y2W1 955 aaKnown RBP27.8■■■□□ 2.04
ARHGEF1-217ENST00000598812 USP47Q96K76 1375 aa27.8■■■□□ 2.04
ARHGEF1-217ENST00000598812 CRB1P82279 1406 aa27.79■■■□□ 2.04
ARHGEF1-217ENST00000598812 EDC4Q6P2E9 1401 aaKnown RBP27.78■■■□□ 2.04
ARHGEF1-217ENST00000598812 NINLQ9Y2I6 1382 aa27.78■■■□□ 2.04
ARHGEF1-217ENST00000598812 ARHGEF25Q86VW2 580 aa27.78■■■□□ 2.04
ARHGEF1-217ENST00000598812 A0A1W2PP64 1363 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms