RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 TTC21AQ8NDW8 1320 aa26.34■■□□□ 1.81
LTBP4-223ENST00000598717 CNGB1Q14028 1251 aaPredicted RBP26.33■■□□□ 1.81
LTBP4-223ENST00000598717 ROBO1Q9Y6N7 1651 aa26.33■■□□□ 1.81
LTBP4-223ENST00000598717 AMER1Q5JTC6 1135 aaPredicted RBP26.32■■□□□ 1.8
LTBP4-223ENST00000598717 SSH2Q76I76 1423 aa26.31■■□□□ 1.8
LTBP4-223ENST00000598717 CC2D1BQ5T0F9 858 aaKnown RBP26.31■■□□□ 1.8
LTBP4-223ENST00000598717 FYB1O15117 783 aa26.29■■□□□ 1.8
LTBP4-223ENST00000598717 ANP32CO43423 234 aa26.29■■□□□ 1.8
LTBP4-223ENST00000598717 NPC1L1Q9UHC9 1359 aa26.29■■□□□ 1.8
LTBP4-223ENST00000598717 NRKQ7Z2Y5 1582 aa26.29■■□□□ 1.8
LTBP4-223ENST00000598717 NME9Q86XW9 330 aa26.28■■□□□ 1.8
LTBP4-223ENST00000598717 ABTB2Q8N961 1025 aa26.28■■□□□ 1.8
LTBP4-223ENST00000598717 SOS2Q07890 1332 aaPredicted RBP26.28■■□□□ 1.8
LTBP4-223ENST00000598717 NSD2O96028 1365 aa26.28■■□□□ 1.8
LTBP4-223ENST00000598717 LMOD2Q6P5Q4 547 aa26.27■■□□□ 1.8
LTBP4-223ENST00000598717 GGNBP2Q9H3C7 697 aa26.27■■□□□ 1.8
LTBP4-223ENST00000598717 SBNO1A3KN83 1393 aa26.27■■□□□ 1.8
LTBP4-223ENST00000598717 PXDNQ92626 1479 aa26.27■■□□□ 1.8
LTBP4-223ENST00000598717 NHSL1Q5SYE7 1610 aa26.25■■□□□ 1.79
LTBP4-223ENST00000598717 MORC1Q86VD1 984 aa26.24■■□□□ 1.79
LTBP4-223ENST00000598717 COG3Q96JB2 828 aa26.24■■□□□ 1.79
LTBP4-223ENST00000598717 NLRP6P59044 892 aa26.23■■□□□ 1.79
LTBP4-223ENST00000598717 AHDC1Q5TGY3 1603 aaPredicted RBP26.23■■□□□ 1.79
LTBP4-223ENST00000598717 RALBP1Q15311 655 aa26.22■■□□□ 1.79
LTBP4-223ENST00000598717 TRPM3Q9HCF6 1732 aaPredicted RBP26.22■■□□□ 1.79
LTBP4-223ENST00000598717 TNS3Q68CZ2 1445 aa26.22■■□□□ 1.79
LTBP4-223ENST00000598717 KIF20BQ96Q89 1820 aa26.21■■□□□ 1.79
LTBP4-223ENST00000598717 SPATA31A3Q5VYP0 1347 aa26.21■■□□□ 1.79
LTBP4-223ENST00000598717 NUTM2GQ5VZR2 741 aa26.21■■□□□ 1.79
LTBP4-223ENST00000598717 ZRANB1Q9UGI0 708 aa26.21■■□□□ 1.79
LTBP4-223ENST00000598717 NLRP13Q86W25 1043 aa26.2■■□□□ 1.78
LTBP4-223ENST00000598717 LRRC59Q96AG4 307 aaKnown RBP26.2■■□□□ 1.78
LTBP4-223ENST00000598717 PRKRIP1Q9H875 184 aaPredicted RBP26.2■■□□□ 1.78
LTBP4-223ENST00000598717 USP31Q70CQ4 1352 aa26.2■■□□□ 1.78
LTBP4-223ENST00000598717 ARHGEF10O15013 1369 aa26.19■■□□□ 1.78
LTBP4-223ENST00000598717 PIK3C2AO00443 1686 aa26.17■■□□□ 1.78
LTBP4-223ENST00000598717 PARD3Q8TEW0 1356 aa26.16■■□□□ 1.78
LTBP4-223ENST00000598717 PHLPP1O60346 1717 aa26.16■■□□□ 1.78
LTBP4-223ENST00000598717 OVOS2A0A0J9YW53 1432 aa26.15■■□□□ 1.78
LTBP4-223ENST00000598717 OVOS2Q6IE36 1432 aa26.15■■□□□ 1.78
LTBP4-223ENST00000598717 TNNT2P45379 298 aaPredicted RBP26.15■■□□□ 1.78
LTBP4-223ENST00000598717 ALS2Q96Q42 1657 aa26.14■■□□□ 1.78
LTBP4-223ENST00000598717 PLEKHG5O94827 1062 aa26.13■■□□□ 1.77
LTBP4-223ENST00000598717 ANKRD26Q9UPS8 1709 aa26.13■■□□□ 1.77
LTBP4-223ENST00000598717 SOX12O15370 315 aa26.1■■□□□ 1.77
LTBP4-223ENST00000598717 KCNH5Q8NCM2 988 aa26.1■■□□□ 1.77
LTBP4-223ENST00000598717 MYBBP1AQ9BQG0 1328 aaKnown RBP26.1■■□□□ 1.77
LTBP4-223ENST00000598717 COL16A1Q07092 1604 aaPredicted RBP26.1■■□□□ 1.77
LTBP4-223ENST00000598717 MIER1Q8N108 512 aa26.09■■□□□ 1.77
LTBP4-223ENST00000598717 PPP2R1AP30153 589 aa26.08■■□□□ 1.77
LTBP4-223ENST00000598717 USP54Q70EL1 1684 aa26.08■■□□□ 1.77
LTBP4-223ENST00000598717 USP19O94966 1318 aa26.08■■□□□ 1.77
LTBP4-223ENST00000598717 HSPA1LP34931 641 aa26.06■■□□□ 1.76
LTBP4-223ENST00000598717 HAP1P54257 671 aaPredicted RBP26.06■■□□□ 1.76
LTBP4-223ENST00000598717 GCP02774 474 aa26.05■■□□□ 1.76
LTBP4-223ENST00000598717 CABLES1Q8TDN4 633 aa26.05■■□□□ 1.76
LTBP4-223ENST00000598717 AATKQ6ZMQ8 1374 aa26.05■■□□□ 1.76
LTBP4-223ENST00000598717 PNPLA6Q8IY17 1366 aa26.05■■□□□ 1.76
LTBP4-223ENST00000598717 FBLN1P23142 703 aa26.04■■□□□ 1.76
LTBP4-223ENST00000598717 SLIT3O75094 1523 aa26.04■■□□□ 1.76
LTBP4-223ENST00000598717 MED1Q15648 1581 aaPredicted RBP26.03■■□□□ 1.76
LTBP4-223ENST00000598717 MARF1Q9Y4F3 1742 aaKnown RBP26.02■■□□□ 1.76
LTBP4-223ENST00000598717 FBXO41Q8TF61 875 aa26.02■■□□□ 1.76
LTBP4-223ENST00000598717 RRS1Q15050 365 aaKnown RBP26.01■■□□□ 1.75
LTBP4-223ENST00000598717 JCADQ9P266 1359 aa26.01■■□□□ 1.75
LTBP4-223ENST00000598717 MTHFSP49914 203 aa26■■□□□ 1.75
LTBP4-223ENST00000598717 POLKQ9UBT6 870 aa26■■□□□ 1.75
LTBP4-223ENST00000598717 PPM1GO15355 546 aaPredicted RBP25.99■■□□□ 1.75
LTBP4-223ENST00000598717 ZBTB7CA1YPR0 619 aa25.98■■□□□ 1.75
LTBP4-223ENST00000598717 EMILIN1Q9Y6C2 1016 aa25.98■■□□□ 1.75
LTBP4-223ENST00000598717 COL22A1Q8NFW1 1626 aaPredicted RBP25.97■■□□□ 1.75
LTBP4-223ENST00000598717 PHRF1Q9P1Y6 1649 aaKnown RBP25.97■■□□□ 1.75
LTBP4-223ENST00000598717 CCER2I3L3R5 266 aa25.97■■□□□ 1.75
LTBP4-223ENST00000598717 ZC3H6P61129 1189 aaKnown RBP25.97■■□□□ 1.75
LTBP4-223ENST00000598717 MAP3K19Q56UN5 1328 aa25.96■■□□□ 1.75
LTBP4-223ENST00000598717 AMPHP49418 695 aa25.96■■□□□ 1.75
LTBP4-223ENST00000598717 CFAP53Q96M91 514 aa25.96■■□□□ 1.75
LTBP4-223ENST00000598717 NFAT5O94916 1531 aa25.96■■□□□ 1.75
LTBP4-223ENST00000598717 ARHGEF25Q86VW2 580 aa25.95■■□□□ 1.74
LTBP4-223ENST00000598717 CRYBG1Q9Y4K1 1723 aa25.94■■□□□ 1.74
LTBP4-223ENST00000598717 MRS2Q9HD23 443 aa25.93■■□□□ 1.74
LTBP4-223ENST00000598717 SHPRHQ149N8 1683 aa25.93■■□□□ 1.74
LTBP4-223ENST00000598717 MAP2P11137 1827 aaKnown RBP25.93■■□□□ 1.74
LTBP4-223ENST00000598717 SMG6Q86US8 1419 aaKnown RBP25.92■■□□□ 1.74
LTBP4-223ENST00000598717 NUTM2BA6NNL0 878 aaPredicted RBP25.92■■□□□ 1.74
LTBP4-223ENST00000598717 NUTM2EB1AL46 878 aaPredicted RBP25.92■■□□□ 1.74
LTBP4-223ENST00000598717 NUTM2AQ8IVF1 878 aaPredicted RBP25.92■■□□□ 1.74
LTBP4-223ENST00000598717 KIF24Q5T7B8 1368 aa25.92■■□□□ 1.74
LTBP4-223ENST00000598717 CPDO75976 1380 aa25.91■■□□□ 1.74
LTBP4-223ENST00000598717 SPATA31A6Q5VVP1 1343 aa25.9■■□□□ 1.74
LTBP4-223ENST00000598717 PRDM11Q9NQV5 511 aa25.9■■□□□ 1.74
LTBP4-223ENST00000598717 ABCA3Q99758 1704 aa25.9■■□□□ 1.74
LTBP4-223ENST00000598717 FLT4P35916 1363 aa25.9■■□□□ 1.74
LTBP4-223ENST00000598717 KIAA0232Q92628 1395 aa25.9■■□□□ 1.74
LTBP4-223ENST00000598717 IP6K1Q92551 441 aa25.89■■□□□ 1.74
LTBP4-223ENST00000598717 RTL1A6NKG5 1358 aa25.89■■□□□ 1.74
LTBP4-223ENST00000598717 CDK12Q9NYV4 1490 aaPredicted RBP25.88■■□□□ 1.73
LTBP4-223ENST00000598717 HOXC9P31274 260 aa25.88■■□□□ 1.73
LTBP4-223ENST00000598717 CCDC184Q52MB2 194 aa25.88■■□□□ 1.73
LTBP4-223ENST00000598717 LTN1O94822 1766 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms