RNA–Protein interactions for RNA: ENST00000598698.5

FARP1-225, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-225ENST00000598698 TRIM34Q9BYJ4 488 aa11.61□□□□□ -0.55
FARP1-225ENST00000598698 CTDSPL2Q05D32 466 aa11.6□□□□□ -0.55
FARP1-225ENST00000598698 GFRA3O60609 400 aa11.59□□□□□ -0.55
FARP1-225ENST00000598698 CCDC27Q2M243 656 aa11.59□□□□□ -0.55
FARP1-225ENST00000598698 KMT5BQ4FZB7 885 aa11.59□□□□□ -0.55
FARP1-225ENST00000598698 IGSF3O75054 1194 aa11.58□□□□□ -0.56
FARP1-225ENST00000598698 FDX1P10109 184 aa11.58□□□□□ -0.56
FARP1-225ENST00000598698 CDCA8Q53HL2 280 aa11.58□□□□□ -0.56
FARP1-225ENST00000598698 ALG2Q9H553 416 aa11.58□□□□□ -0.56
FARP1-225ENST00000598698 HOXA2O43364 376 aa11.57□□□□□ -0.56
FARP1-225ENST00000598698 ACTN4O43707 911 aaKnown RBP11.57□□□□□ -0.56
FARP1-225ENST00000598698 TSC1Q92574 1164 aa11.57□□□□□ -0.56
FARP1-225ENST00000598698 TFIP11Q9UBB9 837 aaKnown RBP11.57□□□□□ -0.56
FARP1-225ENST00000598698 NRG2O14511 850 aaPredicted RBP11.56□□□□□ -0.56
FARP1-225ENST00000598698 USP46P62068 366 aa11.56□□□□□ -0.56
FARP1-225ENST00000598698 SND1Q7KZF4 910 aaKnown RBP eCLIP11.56□□□□□ -0.56
FARP1-225ENST00000598698 LRRN4Q8WUT4 740 aa11.56□□□□□ -0.56
FARP1-225ENST00000598698 VRTNQ9H8Y1 702 aa11.56□□□□□ -0.56
FARP1-225ENST00000598698 LOC105371045A0A1W2PR82 267 aa11.55□□□□□ -0.56
FARP1-225ENST00000598698 GUCA2AQ02747 115 aa11.55□□□□□ -0.56
FARP1-225ENST00000598698 BLOC1S3Q6QNY0 202 aa11.55□□□□□ -0.56
FARP1-225ENST00000598698 HELBQ8NG08 1087 aaPredicted RBP11.55□□□□□ -0.56
FARP1-225ENST00000598698 UCN2Q96RP3 112 aa11.55□□□□□ -0.56
FARP1-225ENST00000598698 PCDHGC3Q9UN70 934 aa11.55□□□□□ -0.56
FARP1-225ENST00000598698 RSPH4AQ5TD94 716 aa11.54□□□□□ -0.56
FARP1-225ENST00000598698 HLA-CQ95604 372 aa11.53□□□□□ -0.56
FARP1-225ENST00000598698 TMEM88BA6NKF7 163 aa11.52□□□□□ -0.57
FARP1-225ENST00000598698 ATG7O95352 703 aa11.52□□□□□ -0.57
FARP1-225ENST00000598698 CFHP08603 1231 aa11.52□□□□□ -0.57
FARP1-225ENST00000598698 GCGRP47871 477 aa11.52□□□□□ -0.57
FARP1-225ENST00000598698 PRR7Q8TB68 274 aa11.52□□□□□ -0.57
FARP1-225ENST00000598698 EPS8L1Q8TE68 723 aa11.52□□□□□ -0.57
FARP1-225ENST00000598698 SLC10A3P09131 477 aa11.51□□□□□ -0.57
FARP1-225ENST00000598698 MTMR2Q13614 643 aa11.51□□□□□ -0.57
FARP1-225ENST00000598698 TRAF7Q6Q0C0 670 aa11.51□□□□□ -0.57
FARP1-225ENST00000598698 AMOTL2Q9Y2J4 779 aa11.5□□□□□ -0.57
FARP1-225ENST00000598698 MAFBQ9Y5Q3 323 aaPredicted RBP11.5□□□□□ -0.57
FARP1-225ENST00000598698 SOX11P35716 441 aa11.49□□□□□ -0.57
FARP1-225ENST00000598698 CFAP99D6REC4 459 aa11.48□□□□□ -0.57
FARP1-225ENST00000598698 RNF223E7ERA6 249 aa11.48□□□□□ -0.57
FARP1-225ENST00000598698 SEMA3FQ13275 785 aa11.48□□□□□ -0.57
FARP1-225ENST00000598698 NR1I2O75469 434 aa11.47□□□□□ -0.57
FARP1-225ENST00000598698 TBC1D9Q6ZT07 1266 aa11.47□□□□□ -0.57
FARP1-225ENST00000598698 ANKLE1Q8NAG6 615 aa11.47□□□□□ -0.57
FARP1-225ENST00000598698 PDZRN3Q9UPQ7 1066 aa11.46□□□□□ -0.57
FARP1-225ENST00000598698 C6orf229H3BNL8 230 aa11.45□□□□□ -0.58
FARP1-225ENST00000598698 LCE2BO14633 110 aa11.45□□□□□ -0.58
FARP1-225ENST00000598698 TLL1O43897 1013 aa11.45□□□□□ -0.58
FARP1-225ENST00000598698 ADH1BP00325 375 aa11.44□□□□□ -0.58
FARP1-225ENST00000598698 SLC19A1P41440 591 aa11.44□□□□□ -0.58
FARP1-225ENST00000598698 NR6A1Q15406 480 aa11.43□□□□□ -0.58
FARP1-225ENST00000598698 B4GALNT3Q6L9W6 998 aa11.42□□□□□ -0.58
FARP1-225ENST00000598698 GNEQ9Y223 722 aaKnown RBP11.42□□□□□ -0.58
FARP1-225ENST00000598698 ATP9BO43861 1147 aa11.41□□□□□ -0.58
FARP1-225ENST00000598698 S1PR4O95977 384 aa11.4□□□□□ -0.58
FARP1-225ENST00000598698 SPRYD7Q5W111 196 aa11.4□□□□□ -0.58
FARP1-225ENST00000598698 SCUBE3Q8IX30 993 aa11.4□□□□□ -0.58
FARP1-225ENST00000598698 PNMA1Q8ND90 353 aa11.4□□□□□ -0.58
FARP1-225ENST00000598698 EIF4G2P78344 907 aaKnown RBP eCLIP11.39□□□□□ -0.59
FARP1-225ENST00000598698 ZNF598Q86UK7 904 aaKnown RBP11.39□□□□□ -0.59
FARP1-225ENST00000598698 EMID1Q96A84 441 aaPredicted RBP11.39□□□□□ -0.59
FARP1-225ENST00000598698 SYMPKQ92797 1274 aaKnown RBP11.38□□□□□ -0.59
FARP1-225ENST00000598698 SLC6A16Q9GZN6 736 aa11.38□□□□□ -0.59
FARP1-225ENST00000598698 SHROOM4Q9ULL8 1493 aa11.38□□□□□ -0.59
FARP1-225ENST00000598698 TMEM164Q5U3C3 297 aa11.37□□□□□ -0.59
FARP1-225ENST00000598698 STK32AQ8WU08 396 aa11.37□□□□□ -0.59
FARP1-225ENST00000598698 ZMIZ1Q9ULJ6 1067 aa11.37□□□□□ -0.59
FARP1-225ENST00000598698 UNCXA6NJT0 531 aa11.36□□□□□ -0.59
FARP1-225ENST00000598698 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
FARP1-225ENST00000598698 PRR20EP86478 221 aa11.36□□□□□ -0.59
FARP1-225ENST00000598698 PRR20CP86479 221 aa11.36□□□□□ -0.59
FARP1-225ENST00000598698 PRR20DP86480 221 aa11.36□□□□□ -0.59
FARP1-225ENST00000598698 PRR20BP86481 221 aa11.36□□□□□ -0.59
FARP1-225ENST00000598698 PRR20AP86496 221 aa11.36□□□□□ -0.59
FARP1-225ENST00000598698 FUT2Q10981 343 aa11.36□□□□□ -0.59
FARP1-225ENST00000598698 KANK4Q5T7N3 995 aaPredicted RBP11.36□□□□□ -0.59
FARP1-225ENST00000598698 TRIM67Q6ZTA4 783 aa11.36□□□□□ -0.59
FARP1-225ENST00000598698 PPEF1O14829 653 aaPredicted RBP11.35□□□□□ -0.59
FARP1-225ENST00000598698 GRIPAP1Q4V328 841 aa11.35□□□□□ -0.59
FARP1-225ENST00000598698 CCER1Q8TC90 406 aaPredicted RBP11.35□□□□□ -0.59
FARP1-225ENST00000598698 PIK3CDO00329 1044 aa11.34□□□□□ -0.59
FARP1-225ENST00000598698 ELOAQ14241 798 aaKnown RBP11.34□□□□□ -0.59
FARP1-225ENST00000598698 PUS10Q3MIT2 529 aaKnown RBP11.34□□□□□ -0.59
FARP1-225ENST00000598698 LIAT1Q6ZQX7 453 aa11.34□□□□□ -0.59
FARP1-225ENST00000598698 SPSB2Q99619 263 aa11.34□□□□□ -0.59
FARP1-225ENST00000598698 MORN1Q5T089 497 aa11.33□□□□□ -0.6
FARP1-225ENST00000598698 NOVA2Q9UNW9 492 aaKnown RBP11.33□□□□□ -0.6
FARP1-225ENST00000598698 ATP6V1AP38606 617 aa11.32□□□□□ -0.6
FARP1-225ENST00000598698 NR1H3Q13133 447 aa11.32□□□□□ -0.6
FARP1-225ENST00000598698 ZNF697Q5TEC3 545 aa11.31□□□□□ -0.6
FARP1-225ENST00000598698 TXNDC2Q86VQ3 553 aa11.31□□□□□ -0.6
FARP1-225ENST00000598698 USP17L3A6NCW0 530 aa11.3□□□□□ -0.6
FARP1-225ENST00000598698 USP17L4A6NCW7 530 aa11.3□□□□□ -0.6
FARP1-225ENST00000598698 DGAT1O75907 488 aa11.3□□□□□ -0.6
FARP1-225ENST00000598698 USP17L2Q6R6M4 530 aa11.3□□□□□ -0.6
FARP1-225ENST00000598698 USP17L1Q7RTZ2 530 aa11.3□□□□□ -0.6
FARP1-225ENST00000598698 USP35Q9P2H5 1018 aa11.3□□□□□ -0.6
FARP1-225ENST00000598698 SALL2Q9Y467 1007 aaPredicted RBP11.3□□□□□ -0.6
FARP1-225ENST00000598698 RBM47A0AV96 593 aaKnown RBP11.29□□□□□ -0.6
FARP1-225ENST00000598698 FBXO45P0C2W1 286 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms