RNA–Protein interactions for RNA: ENST00000596482.5

HOMER3-209, Transcript of homer scaffold protein 3, humanhuman

TSL 5

Gene HOMER3, Length 866 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-209ENST00000596482 ATAD2Q6PL18 1390 aa27.15■■□□□ 1.94
HOMER3-209ENST00000596482 RXRBP28702 533 aa27.15■■□□□ 1.94
HOMER3-209ENST00000596482 FNBP4Q8N3X1 1017 aaPredicted RBP27.15■■□□□ 1.94
HOMER3-209ENST00000596482 QTRT2Q9H974 415 aaKnown RBP27.13■■□□□ 1.93
HOMER3-209ENST00000596482 CDK12Q9NYV4 1490 aaPredicted RBP27.12■■□□□ 1.93
HOMER3-209ENST00000596482 CRYBG1Q9Y4K1 1723 aa27.11■■□□□ 1.93
HOMER3-209ENST00000596482 CABP1Q9NZU7 370 aa27.11■■□□□ 1.93
HOMER3-209ENST00000596482 TRPC5Q9UL62 973 aaPredicted RBP27.11■■□□□ 1.93
HOMER3-209ENST00000596482 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.1■■□□□ 1.93
HOMER3-209ENST00000596482 BRD4O60885 1362 aaPredicted RBP27.09■■□□□ 1.93
HOMER3-209ENST00000596482 ATRNO75882 1429 aa27.09■■□□□ 1.93
HOMER3-209ENST00000596482 PLCH1Q4KWH8 1693 aa27.09■■□□□ 1.93
HOMER3-209ENST00000596482 RBM6P78332 1123 aaKnown RBP27.09■■□□□ 1.93
HOMER3-209ENST00000596482 SLIT2O94813 1529 aa27.09■■□□□ 1.93
HOMER3-209ENST00000596482 USP6P35125 1406 aa27.08■■□□□ 1.93
HOMER3-209ENST00000596482 BCL9LQ86UU0 1499 aa27.08■■□□□ 1.93
HOMER3-209ENST00000596482 PHRF1Q9P1Y6 1649 aaKnown RBP27.08■■□□□ 1.93
HOMER3-209ENST00000596482 USP47Q96K76 1375 aa27.06■■□□□ 1.92
HOMER3-209ENST00000596482 NWD2Q9ULI1 1742 aa27.05■■□□□ 1.92
HOMER3-209ENST00000596482 ABTB2Q8N961 1025 aa27.04■■□□□ 1.92
HOMER3-209ENST00000596482 RGS12O14924 1447 aa27.04■■□□□ 1.92
HOMER3-209ENST00000596482 ST20-MTHFSA0A0A6YYL1 179 aa27.03■■□□□ 1.92
HOMER3-209ENST00000596482 AKAP12Q02952 1782 aa27.03■■□□□ 1.92
HOMER3-209ENST00000596482 COL14A1Q05707 1796 aaKnown RBP27.03■■□□□ 1.92
HOMER3-209ENST00000596482 NUTM2GQ5VZR2 741 aa27.03■■□□□ 1.92
HOMER3-209ENST00000596482 UNC5CLQ8IV45 518 aa27.03■■□□□ 1.92
HOMER3-209ENST00000596482 SLC24A1O60721 1099 aa27.01■■□□□ 1.91
HOMER3-209ENST00000596482 NRKQ7Z2Y5 1582 aa27.01■■□□□ 1.91
HOMER3-209ENST00000596482 ZNF692Q9BU19 519 aaPredicted RBP26.99■■□□□ 1.91
HOMER3-209ENST00000596482 TESK2Q96S53 571 aa26.98■■□□□ 1.91
HOMER3-209ENST00000596482 PRDM11Q9NQV5 511 aa26.98■■□□□ 1.91
HOMER3-209ENST00000596482 USP19O94966 1318 aa26.97■■□□□ 1.91
HOMER3-209ENST00000596482 NRAPQ86VF7 1730 aa26.97■■□□□ 1.91
HOMER3-209ENST00000596482 FAM83GA6ND36 823 aa26.97■■□□□ 1.91
HOMER3-209ENST00000596482 NLRP13Q86W25 1043 aa26.97■■□□□ 1.91
HOMER3-209ENST00000596482 CPSF1Q10570 1443 aaKnown RBP26.97■■□□□ 1.91
HOMER3-209ENST00000596482 SSH2Q76I76 1423 aa26.97■■□□□ 1.91
HOMER3-209ENST00000596482 KTN1Q86UP2 1357 aaKnown RBP26.97■■□□□ 1.91
HOMER3-209ENST00000596482 MON2Q7Z3U7 1717 aa26.96■■□□□ 1.91
HOMER3-209ENST00000596482 PIK3C2AO00443 1686 aa26.96■■□□□ 1.91
HOMER3-209ENST00000596482 TMC1Q8TDI8 760 aa26.96■■□□□ 1.91
HOMER3-209ENST00000596482 PUS7Q96PZ0 661 aaKnown RBP26.96■■□□□ 1.91
HOMER3-209ENST00000596482 KIAA0232Q92628 1395 aa26.96■■□□□ 1.91
HOMER3-209ENST00000596482 GJD4Q96KN9 370 aaPredicted RBP26.95■■□□□ 1.9
HOMER3-209ENST00000596482 NINLQ9Y2I6 1382 aa26.94■■□□□ 1.9
HOMER3-209ENST00000596482 GLI3P10071 1580 aa26.93■■□□□ 1.9
HOMER3-209ENST00000596482 BTG4Q9NY30 223 aa26.93■■□□□ 1.9
HOMER3-209ENST00000596482 CCDC9Q9Y3X0 531 aaKnown RBP26.93■■□□□ 1.9
HOMER3-209ENST00000596482 TTC21BQ7Z4L5 1316 aa26.92■■□□□ 1.9
HOMER3-209ENST00000596482 TTC21AQ8NDW8 1320 aa26.92■■□□□ 1.9
HOMER3-209ENST00000596482 TMF1P82094 1093 aa26.92■■□□□ 1.9
HOMER3-209ENST00000596482 VPS72Q15906 364 aa26.92■■□□□ 1.9
HOMER3-209ENST00000596482 HDGFL2Q7Z4V5 671 aaPredicted RBP26.92■■□□□ 1.9
HOMER3-209ENST00000596482 NLRP6P59044 892 aa26.91■■□□□ 1.9
HOMER3-209ENST00000596482 CD163L1Q9NR16 1453 aa26.91■■□□□ 1.9
HOMER3-209ENST00000596482 SLIT3O75094 1523 aa26.9■■□□□ 1.9
HOMER3-209ENST00000596482 ZC3H6P61129 1189 aaKnown RBP26.9■■□□□ 1.9
HOMER3-209ENST00000596482 CPDO75976 1380 aa26.89■■□□□ 1.9
HOMER3-209ENST00000596482 TERF2IPQ9NYB0 399 aa26.89■■□□□ 1.9
HOMER3-209ENST00000596482 CHRNA2Q15822 529 aa26.88■■□□□ 1.89
HOMER3-209ENST00000596482 A0A1W2PP64 1363 aa26.87■■□□□ 1.89
HOMER3-209ENST00000596482 GCP02774 474 aa26.87■■□□□ 1.89
HOMER3-209ENST00000596482 SLC12A5Q9H2X9 1139 aa26.87■■□□□ 1.89
HOMER3-209ENST00000596482 EDC4Q6P2E9 1401 aaKnown RBP26.86■■□□□ 1.89
HOMER3-209ENST00000596482 CDCA8Q53HL2 280 aa26.85■■□□□ 1.89
HOMER3-209ENST00000596482 LMO7Q8WWI1 1683 aa26.83■■□□□ 1.89
HOMER3-209ENST00000596482 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.83■■□□□ 1.89
HOMER3-209ENST00000596482 USP54Q70EL1 1684 aa26.81■■□□□ 1.88
HOMER3-209ENST00000596482 ZBTB7CA1YPR0 619 aa26.8■■□□□ 1.88
HOMER3-209ENST00000596482 KCNH5Q8NCM2 988 aa26.8■■□□□ 1.88
HOMER3-209ENST00000596482 STRN4Q9NRL3 753 aa26.8■■□□□ 1.88
HOMER3-209ENST00000596482 A0A0G2JS52 829 aa26.79■■□□□ 1.88
HOMER3-209ENST00000596482 MYT1Q01538 1121 aa26.79■■□□□ 1.88
HOMER3-209ENST00000596482 ANKRD36BQ8N2N9 1353 aa26.79■■□□□ 1.88
HOMER3-209ENST00000596482 SPATA31A5Q5VU36 1347 aa26.78■■□□□ 1.88
HOMER3-209ENST00000596482 SPATA31A7Q8IWB4 1347 aa26.78■■□□□ 1.88
HOMER3-209ENST00000596482 USP31Q70CQ4 1352 aa26.78■■□□□ 1.88
HOMER3-209ENST00000596482 CAMTA1Q9Y6Y1 1673 aa26.77■■□□□ 1.88
HOMER3-209ENST00000596482 EVA1CP58658 441 aa26.77■■□□□ 1.88
HOMER3-209ENST00000596482 UPF1Q92900 1129 aaKnown RBP eCLIP26.77■■□□□ 1.88
HOMER3-209ENST00000596482 NFAT5O94916 1531 aa26.76■■□□□ 1.87
HOMER3-209ENST00000596482 SOX12O15370 315 aa26.76■■□□□ 1.87
HOMER3-209ENST00000596482 EIF4G2P78344 907 aaKnown RBP eCLIP26.76■■□□□ 1.87
HOMER3-209ENST00000596482 NME9Q86XW9 330 aa26.76■■□□□ 1.87
HOMER3-209ENST00000596482 SEPT12Q8IYM1 358 aa26.76■■□□□ 1.87
HOMER3-209ENST00000596482 AATKQ6ZMQ8 1374 aa26.75■■□□□ 1.87
HOMER3-209ENST00000596482 COL5A2P05997 1499 aaPredicted RBP26.74■■□□□ 1.87
HOMER3-209ENST00000596482 FAM98CQ17RN3 349 aaKnown RBP26.74■■□□□ 1.87
HOMER3-209ENST00000596482 MYOM1P52179 1685 aa26.73■■□□□ 1.87
HOMER3-209ENST00000596482 SPATA31A1Q5TZJ5 1347 aa26.72■■□□□ 1.87
HOMER3-209ENST00000596482 OVOS2A0A0J9YW53 1432 aa26.72■■□□□ 1.87
HOMER3-209ENST00000596482 OVOS2Q6IE36 1432 aa26.72■■□□□ 1.87
HOMER3-209ENST00000596482 ABCC6O95255 1503 aa26.71■■□□□ 1.87
HOMER3-209ENST00000596482 THSD7AQ9UPZ6 1657 aa26.71■■□□□ 1.87
HOMER3-209ENST00000596482 ONECUT3O60422 494 aaPredicted RBP26.71■■□□□ 1.87
HOMER3-209ENST00000596482 ZRANB1Q9UGI0 708 aa26.71■■□□□ 1.87
HOMER3-209ENST00000596482 BRWD3Q6RI45 1802 aa26.71■■□□□ 1.87
HOMER3-209ENST00000596482 HSPA5P11021 654 aaKnown RBP26.7■■□□□ 1.86
HOMER3-209ENST00000596482 ARHGEF25Q86VW2 580 aa26.69■■□□□ 1.86
HOMER3-209ENST00000596482 LARP1Q6PKG0 1096 aaKnown RBP26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms