RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 ARHGEF28Q8N1W1 1705 aaKnown RBP21.66■■□□□ 1.06
XRCC1-205ENST00000595789 DEFB132Q7Z7B7 95 aa21.66■■□□□ 1.06
XRCC1-205ENST00000595789 CDK19Q9BWU1 502 aa21.66■■□□□ 1.06
XRCC1-205ENST00000595789 PAK3O75914 559 aaPredicted RBP21.65■■□□□ 1.06
XRCC1-205ENST00000595789 NRAPQ86VF7 1730 aa21.64■■□□□ 1.06
XRCC1-205ENST00000595789 FAM98CQ17RN3 349 aaKnown RBP21.64■■□□□ 1.05
XRCC1-205ENST00000595789 NBPF1Q3BBV0 1214 aa21.64■■□□□ 1.05
XRCC1-205ENST00000595789 SPATA31A5Q5VU36 1347 aa21.62■■□□□ 1.05
XRCC1-205ENST00000595789 SPATA31A7Q8IWB4 1347 aa21.62■■□□□ 1.05
XRCC1-205ENST00000595789 COL14A1Q05707 1796 aaKnown RBP21.62■■□□□ 1.05
XRCC1-205ENST00000595789 CRYBG1Q9Y4K1 1723 aa21.62■■□□□ 1.05
XRCC1-205ENST00000595789 POLR3AO14802 1390 aaPredicted RBP21.61■■□□□ 1.05
XRCC1-205ENST00000595789 PLEKHG3A1L390 1219 aa21.61■■□□□ 1.05
XRCC1-205ENST00000595789 CCDC61Q9Y6R9 512 aa21.61■■□□□ 1.05
XRCC1-205ENST00000595789 NBPF8Q3BBV2 869 aa21.6■■□□□ 1.05
XRCC1-205ENST00000595789 PRDM11Q9NQV5 511 aa21.6■■□□□ 1.05
XRCC1-205ENST00000595789 ACEP12821 1306 aa21.59■■□□□ 1.05
XRCC1-205ENST00000595789 KIAA1210Q9ULL0 1709 aa21.58■■□□□ 1.05
XRCC1-205ENST00000595789 SF3B2Q13435 895 aaKnown RBP21.58■■□□□ 1.05
XRCC1-205ENST00000595789 KIAA0232Q92628 1395 aa21.58■■□□□ 1.04
XRCC1-205ENST00000595789 A0A0G2JS52 829 aa21.57■■□□□ 1.04
XRCC1-205ENST00000595789 MYT1Q01538 1121 aa21.57■■□□□ 1.04
XRCC1-205ENST00000595789 ITSN1Q15811 1721 aa21.57■■□□□ 1.04
XRCC1-205ENST00000595789 NUTM2GQ5VZR2 741 aa21.56■■□□□ 1.04
XRCC1-205ENST00000595789 CHRNA2Q15822 529 aa21.55■■□□□ 1.04
XRCC1-205ENST00000595789 SPATA31A1Q5TZJ5 1347 aa21.55■■□□□ 1.04
XRCC1-205ENST00000595789 TOPAZ1Q8N9V7 1692 aa21.54■■□□□ 1.04
XRCC1-205ENST00000595789 ZC3H6P61129 1189 aaKnown RBP21.54■■□□□ 1.04
XRCC1-205ENST00000595789 FAM182BQ5T319 152 aa21.53■■□□□ 1.04
XRCC1-205ENST00000595789 THSD7AQ9UPZ6 1657 aa21.52■■□□□ 1.04
XRCC1-205ENST00000595789 CENPJQ9HC77 1338 aaPredicted RBP21.51■■□□□ 1.03
XRCC1-205ENST00000595789 BAG6P46379 1132 aa21.5■■□□□ 1.03
XRCC1-205ENST00000595789 ABTB2Q8N961 1025 aa21.5■■□□□ 1.03
XRCC1-205ENST00000595789 CABP2Q9NPB3 220 aa21.5■■□□□ 1.03
XRCC1-205ENST00000595789 PHRF1Q9P1Y6 1649 aaKnown RBP21.5■■□□□ 1.03
XRCC1-205ENST00000595789 USP19O94966 1318 aa21.5■■□□□ 1.03
XRCC1-205ENST00000595789 L3MBTL2Q969R5 705 aa21.49■■□□□ 1.03
XRCC1-205ENST00000595789 STRN4Q9NRL3 753 aa21.49■■□□□ 1.03
XRCC1-205ENST00000595789 SRPK2P78362 688 aaKnown RBP21.48■■□□□ 1.03
XRCC1-205ENST00000595789 PPIP5K1Q6PFW1 1433 aa21.47■■□□□ 1.03
XRCC1-205ENST00000595789 EN1Q05925 392 aaPredicted RBP21.47■■□□□ 1.03
XRCC1-205ENST00000595789 CPDO75976 1380 aa21.47■■□□□ 1.03
XRCC1-205ENST00000595789 CAMTA1Q9Y6Y1 1673 aa21.46■■□□□ 1.03
XRCC1-205ENST00000595789 SSH2Q76I76 1423 aa21.46■■□□□ 1.03
XRCC1-205ENST00000595789 GCP02774 474 aa21.45■■□□□ 1.02
XRCC1-205ENST00000595789 BARGINQ6ZT62 677 aa21.45■■□□□ 1.02
XRCC1-205ENST00000595789 NLRP13Q86W25 1043 aa21.45■■□□□ 1.02
XRCC1-205ENST00000595789 NRKQ7Z2Y5 1582 aa21.44■■□□□ 1.02
XRCC1-205ENST00000595789 LARP1Q6PKG0 1096 aaKnown RBP21.44■■□□□ 1.02
XRCC1-205ENST00000595789 SIN3AQ96ST3 1273 aa21.44■■□□□ 1.02
XRCC1-205ENST00000595789 CABP1Q9NZU7 370 aa21.44■■□□□ 1.02
XRCC1-205ENST00000595789 BRD4O60885 1362 aaPredicted RBP21.44■■□□□ 1.02
XRCC1-205ENST00000595789 DISP2A7MBM2 1401 aa21.44■■□□□ 1.02
XRCC1-205ENST00000595789 EVA1CP58658 441 aa21.43■■□□□ 1.02
XRCC1-205ENST00000595789 PSDA5PKW4 1024 aaPredicted RBP21.42■■□□□ 1.02
XRCC1-205ENST00000595789 FAM196AQ6ZSG2 479 aa21.42■■□□□ 1.02
XRCC1-205ENST00000595789 USP35Q9P2H5 1018 aa21.42■■□□□ 1.02
XRCC1-205ENST00000595789 LMO7Q8WWI1 1683 aa21.4■■□□□ 1.02
XRCC1-205ENST00000595789 TCP11L2Q8N4U5 519 aa21.4■■□□□ 1.02
XRCC1-205ENST00000595789 CAMKK2Q96RR4 588 aa21.4■■□□□ 1.02
XRCC1-205ENST00000595789 RGPD1P0DJD0 1748 aa21.4■■□□□ 1.02
XRCC1-205ENST00000595789 USP6P35125 1406 aa21.39■■□□□ 1.02
XRCC1-205ENST00000595789 TRIM37O94972 964 aa21.39■■□□□ 1.01
XRCC1-205ENST00000595789 EZH2Q15910 746 aaKnown RBP21.39■■□□□ 1.01
XRCC1-205ENST00000595789 QRICH2Q9H0J4 1663 aa21.37■■□□□ 1.01
XRCC1-205ENST00000595789 NLRP6P59044 892 aa21.37■■□□□ 1.01
XRCC1-205ENST00000595789 TNS1Q9HBL0 1735 aaKnown RBP21.37■■□□□ 1.01
XRCC1-205ENST00000595789 PDE3BQ13370 1112 aa21.36■■□□□ 1.01
XRCC1-205ENST00000595789 THRAP3Q9Y2W1 955 aaKnown RBP21.36■■□□□ 1.01
XRCC1-205ENST00000595789 EVC2Q86UK5 1308 aa21.35■■□□□ 1.01
XRCC1-205ENST00000595789 COL5A2P05997 1499 aaPredicted RBP21.35■■□□□ 1.01
XRCC1-205ENST00000595789 LRP5O75197 1615 aa21.35■■□□□ 1.01
XRCC1-205ENST00000595789 NEUROD1Q13562 356 aa21.34■■□□□ 1.01
XRCC1-205ENST00000595789 R3HDM1Q15032 1099 aaKnown RBP21.34■■□□□ 1.01
XRCC1-205ENST00000595789 AATKQ6ZMQ8 1374 aa21.34■■□□□ 1.01
XRCC1-205ENST00000595789 SLIT3O75094 1523 aa21.34■■□□□ 1.01
XRCC1-205ENST00000595789 TRPM1Q7Z4N2 1603 aa21.33■■□□□ 1.01
XRCC1-205ENST00000595789 APBA3O96018 575 aa21.33■■□□□ 1.01
XRCC1-205ENST00000595789 ZNF692Q9BU19 519 aaPredicted RBP21.31■■□□□ 1
XRCC1-205ENST00000595789 ROCK2O75116 1388 aaKnown RBP21.31■■□□□ 1
XRCC1-205ENST00000595789 TTC21BQ7Z4L5 1316 aa21.3■■□□□ 1
XRCC1-205ENST00000595789 CRB1P82279 1406 aa21.3■■□□□ 1
XRCC1-205ENST00000595789 AXIN2Q9Y2T1 843 aa21.3■■□□□ 1
XRCC1-205ENST00000595789 PARD3Q8TEW0 1356 aa21.3■■□□□ 1
XRCC1-205ENST00000595789 PIK3C2AO00443 1686 aa21.28■■□□□ 1
XRCC1-205ENST00000595789 ZBTB7CA1YPR0 619 aa21.28■■□□□ 1
XRCC1-205ENST00000595789 ARHGEF25Q86VW2 580 aa21.28■■□□□ 1
XRCC1-205ENST00000595789 COL18A1P39060 1754 aa21.27■■□□□ 1
XRCC1-205ENST00000595789 CPSF1Q10570 1443 aaKnown RBP21.27■■□□□ 1
XRCC1-205ENST00000595789 PARP4Q9UKK3 1724 aaKnown RBP21.26■□□□□ 0.99
XRCC1-205ENST00000595789 C11orf95C9JLR9 678 aaPredicted RBP21.24■□□□□ 0.99
XRCC1-205ENST00000595789 TOM1L2Q6ZVM7 507 aa21.24■□□□□ 0.99
XRCC1-205ENST00000595789 KCNH5Q8NCM2 988 aa21.24■□□□□ 0.99
XRCC1-205ENST00000595789 WDR17Q8IZU2 1322 aa21.24■□□□□ 0.99
XRCC1-205ENST00000595789 TTC21AQ8NDW8 1320 aa21.24■□□□□ 0.99
XRCC1-205ENST00000595789 SBNO2Q9Y2G9 1366 aa21.22■□□□□ 0.99
XRCC1-205ENST00000595789 DDB1Q16531 1140 aa21.21■□□□□ 0.99
XRCC1-205ENST00000595789 RREB1Q92766 1687 aa21.21■□□□□ 0.99
XRCC1-205ENST00000595789 KTN1Q86UP2 1357 aaKnown RBP21.21■□□□□ 0.99
XRCC1-205ENST00000595789 PEAK1Q9H792 1746 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms