RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 KDM2AQ9Y2K7 1162 aa26.96■■□□□ 1.91
CIRBP-238ENST00000592412 ARHGEF28Q8N1W1 1705 aaKnown RBP26.95■■□□□ 1.9
CIRBP-238ENST00000592412 ATP7BP35670 1465 aa26.93■■□□□ 1.9
CIRBP-238ENST00000592412 THSD7AQ9UPZ6 1657 aa26.92■■□□□ 1.9
CIRBP-238ENST00000592412 LRP5O75197 1615 aa26.92■■□□□ 1.9
CIRBP-238ENST00000592412 SPATA31A5Q5VU36 1347 aa26.91■■□□□ 1.9
CIRBP-238ENST00000592412 SPATA31A7Q8IWB4 1347 aa26.91■■□□□ 1.9
CIRBP-238ENST00000592412 A0A0G2JS52 829 aa26.91■■□□□ 1.9
CIRBP-238ENST00000592412 MYT1Q01538 1121 aa26.91■■□□□ 1.9
CIRBP-238ENST00000592412 FAM182BQ5T319 152 aa26.89■■□□□ 1.9
CIRBP-238ENST00000592412 NGDNQ8NEJ9 315 aaKnown RBP26.89■■□□□ 1.9
CIRBP-238ENST00000592412 ITSN1Q15811 1721 aa26.88■■□□□ 1.89
CIRBP-238ENST00000592412 PHRF1Q9P1Y6 1649 aaKnown RBP26.87■■□□□ 1.89
CIRBP-238ENST00000592412 PAK3O75914 559 aaPredicted RBP26.86■■□□□ 1.89
CIRBP-238ENST00000592412 RGPD1P0DJD0 1748 aa26.86■■□□□ 1.89
CIRBP-238ENST00000592412 BAG6P46379 1132 aa26.86■■□□□ 1.89
CIRBP-238ENST00000592412 PSDA5PKW4 1024 aaPredicted RBP26.85■■□□□ 1.89
CIRBP-238ENST00000592412 NUDT16Q96DE0 195 aaKnown RBP26.85■■□□□ 1.89
CIRBP-238ENST00000592412 STAC3Q96MF2 364 aa26.85■■□□□ 1.89
CIRBP-238ENST00000592412 TNS1Q9HBL0 1735 aaKnown RBP26.85■■□□□ 1.89
CIRBP-238ENST00000592412 PRDM11Q9NQV5 511 aa26.84■■□□□ 1.89
CIRBP-238ENST00000592412 TOPAZ1Q8N9V7 1692 aa26.84■■□□□ 1.89
CIRBP-238ENST00000592412 KIAA0232Q92628 1395 aa26.84■■□□□ 1.89
CIRBP-238ENST00000592412 EN1Q05925 392 aaPredicted RBP26.82■■□□□ 1.88
CIRBP-238ENST00000592412 SPATA31A1Q5TZJ5 1347 aa26.81■■□□□ 1.88
CIRBP-238ENST00000592412 DISP2A7MBM2 1401 aa26.81■■□□□ 1.88
CIRBP-238ENST00000592412 HRCP23327 699 aa26.8■■□□□ 1.88
CIRBP-238ENST00000592412 CHRNA2Q15822 529 aa26.8■■□□□ 1.88
CIRBP-238ENST00000592412 POLR3AO14802 1390 aaPredicted RBP26.8■■□□□ 1.88
CIRBP-238ENST00000592412 CDK19Q9BWU1 502 aa26.78■■□□□ 1.88
CIRBP-238ENST00000592412 NRKQ7Z2Y5 1582 aa26.76■■□□□ 1.87
CIRBP-238ENST00000592412 ZC3H6P61129 1189 aaKnown RBP26.76■■□□□ 1.87
CIRBP-238ENST00000592412 NUTM2GQ5VZR2 741 aa26.76■■□□□ 1.87
CIRBP-238ENST00000592412 ACEP12821 1306 aa26.75■■□□□ 1.87
CIRBP-238ENST00000592412 STRN4Q9NRL3 753 aa26.74■■□□□ 1.87
CIRBP-238ENST00000592412 KIAA1210Q9ULL0 1709 aa26.73■■□□□ 1.87
CIRBP-238ENST00000592412 NBPF8Q3BBV2 869 aa26.73■■□□□ 1.87
CIRBP-238ENST00000592412 PLEKHG3A1L390 1219 aa26.72■■□□□ 1.87
CIRBP-238ENST00000592412 EZH2Q15910 746 aaKnown RBP26.72■■□□□ 1.87
CIRBP-238ENST00000592412 LMO7Q8WWI1 1683 aa26.72■■□□□ 1.87
CIRBP-238ENST00000592412 CAMTA1Q9Y6Y1 1673 aa26.72■■□□□ 1.87
CIRBP-238ENST00000592412 SSH2Q76I76 1423 aa26.72■■□□□ 1.87
CIRBP-238ENST00000592412 R3HDM1Q15032 1099 aaKnown RBP26.71■■□□□ 1.87
CIRBP-238ENST00000592412 CCDC61Q9Y6R9 512 aa26.71■■□□□ 1.87
CIRBP-238ENST00000592412 CAMKK2Q96RR4 588 aa26.7■■□□□ 1.86
CIRBP-238ENST00000592412 NBPF1Q3BBV0 1214 aa26.69■■□□□ 1.86
CIRBP-238ENST00000592412 USP19O94966 1318 aa26.68■■□□□ 1.86
CIRBP-238ENST00000592412 TRIM37O94972 964 aa26.68■■□□□ 1.86
CIRBP-238ENST00000592412 FAM196AQ6ZSG2 479 aa26.67■■□□□ 1.86
CIRBP-238ENST00000592412 USP35Q9P2H5 1018 aa26.67■■□□□ 1.86
CIRBP-238ENST00000592412 CPDO75976 1380 aa26.67■■□□□ 1.86
CIRBP-238ENST00000592412 BARGINQ6ZT62 677 aa26.66■■□□□ 1.86
CIRBP-238ENST00000592412 LARP1Q6PKG0 1096 aaKnown RBP26.65■■□□□ 1.86
CIRBP-238ENST00000592412 ABTB2Q8N961 1025 aa26.64■■□□□ 1.86
CIRBP-238ENST00000592412 RREB1Q92766 1687 aa26.63■■□□□ 1.85
CIRBP-238ENST00000592412 PPIP5K1Q6PFW1 1433 aa26.62■■□□□ 1.85
CIRBP-238ENST00000592412 APBA3O96018 575 aa26.6■■□□□ 1.85
CIRBP-238ENST00000592412 EVA1CP58658 441 aa26.6■■□□□ 1.85
CIRBP-238ENST00000592412 PARD3Q8TEW0 1356 aa26.59■■□□□ 1.85
CIRBP-238ENST00000592412 NUP188Q5SRE5 1749 aa26.59■■□□□ 1.85
CIRBP-238ENST00000592412 TCP11L2Q8N4U5 519 aa26.59■■□□□ 1.85
CIRBP-238ENST00000592412 COL5A2P05997 1499 aaPredicted RBP26.59■■□□□ 1.85
CIRBP-238ENST00000592412 GCP02774 474 aa26.58■■□□□ 1.85
CIRBP-238ENST00000592412 CABP2Q9NPB3 220 aa26.58■■□□□ 1.85
CIRBP-238ENST00000592412 PARP4Q9UKK3 1724 aaKnown RBP26.57■■□□□ 1.84
CIRBP-238ENST00000592412 PDE3BQ13370 1112 aa26.57■■□□□ 1.84
CIRBP-238ENST00000592412 CENPJQ9HC77 1338 aaPredicted RBP26.57■■□□□ 1.84
CIRBP-238ENST00000592412 QRICH2Q9H0J4 1663 aa26.57■■□□□ 1.84
CIRBP-238ENST00000592412 SRPK2P78362 688 aaKnown RBP26.56■■□□□ 1.84
CIRBP-238ENST00000592412 NLRP13Q86W25 1043 aa26.55■■□□□ 1.84
CIRBP-238ENST00000592412 USP6P35125 1406 aa26.54■■□□□ 1.84
CIRBP-238ENST00000592412 SLIT3O75094 1523 aa26.54■■□□□ 1.84
CIRBP-238ENST00000592412 THRAP3Q9Y2W1 955 aaKnown RBP26.53■■□□□ 1.84
CIRBP-238ENST00000592412 PEAK1Q9H792 1746 aa26.53■■□□□ 1.84
CIRBP-238ENST00000592412 BRD4O60885 1362 aaPredicted RBP26.52■■□□□ 1.84
CIRBP-238ENST00000592412 CRB1P82279 1406 aa26.51■■□□□ 1.83
CIRBP-238ENST00000592412 CABP1Q9NZU7 370 aa26.5■■□□□ 1.83
CIRBP-238ENST00000592412 PIK3C2AO00443 1686 aa26.5■■□□□ 1.83
CIRBP-238ENST00000592412 COL18A1P39060 1754 aa26.49■■□□□ 1.83
CIRBP-238ENST00000592412 LRRC37A3O60309 1634 aa26.49■■□□□ 1.83
CIRBP-238ENST00000592412 AATKQ6ZMQ8 1374 aa26.48■■□□□ 1.83
CIRBP-238ENST00000592412 NLRP6P59044 892 aa26.46■■□□□ 1.83
CIRBP-238ENST00000592412 OVOS2A0A0G2JMS6 1433 aa26.44■■□□□ 1.82
CIRBP-238ENST00000592412 OVOS2A0A0J9YW53 1432 aa26.44■■□□□ 1.82
CIRBP-238ENST00000592412 OVOS2Q6IE36 1432 aa26.44■■□□□ 1.82
CIRBP-238ENST00000592412 ZBTB7CA1YPR0 619 aa26.43■■□□□ 1.82
CIRBP-238ENST00000592412 SBF2Q86WG5 1849 aa26.43■■□□□ 1.82
CIRBP-238ENST00000592412 TRPM1Q7Z4N2 1603 aa26.43■■□□□ 1.82
CIRBP-238ENST00000592412 WNK3Q9BYP7 1800 aa26.42■■□□□ 1.82
CIRBP-238ENST00000592412 L3MBTL2Q969R5 705 aa26.42■■□□□ 1.82
CIRBP-238ENST00000592412 AXIN2Q9Y2T1 843 aa26.42■■□□□ 1.82
CIRBP-238ENST00000592412 RGPD3A6NKT7 1758 aaPredicted RBP26.41■■□□□ 1.82
CIRBP-238ENST00000592412 RGPD4Q7Z3J3 1758 aa26.41■■□□□ 1.82
CIRBP-238ENST00000592412 NBPF14Q5TI25 921 aa26.41■■□□□ 1.82
CIRBP-238ENST00000592412 PTF1AQ7RTS3 328 aa26.4■■□□□ 1.82
CIRBP-238ENST00000592412 CPSF1Q10570 1443 aaKnown RBP26.39■■□□□ 1.82
CIRBP-238ENST00000592412 WDR17Q8IZU2 1322 aa26.38■■□□□ 1.81
CIRBP-238ENST00000592412 C11orf95C9JLR9 678 aaPredicted RBP26.37■■□□□ 1.81
CIRBP-238ENST00000592412 DDB1Q16531 1140 aa26.37■■□□□ 1.81
CIRBP-238ENST00000592412 TOM1L2Q6ZVM7 507 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms