RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 TTC21BQ7Z4L5 1316 aa30.67■■■□□ 2.5
SPHK1-210ENST00000592299 XIRP1Q702N8 1843 aaKnown RBP30.66■■■□□ 2.5
SPHK1-210ENST00000592299 DCCP43146 1447 aa30.66■■■□□ 2.5
SPHK1-210ENST00000592299 PNISRQ8TF01 805 aaKnown RBP30.65■■■□□ 2.5
SPHK1-210ENST00000592299 NRKQ7Z2Y5 1582 aa30.64■■■□□ 2.5
SPHK1-210ENST00000592299 CADPS2Q86UW7 1296 aa30.64■■■□□ 2.5
SPHK1-210ENST00000592299 ORAI2Q96SN7 254 aa30.64■■■□□ 2.5
SPHK1-210ENST00000592299 C1orf167Q5SNV9 1468 aa30.62■■■□□ 2.49
SPHK1-210ENST00000592299 ZRANB1Q9UGI0 708 aa30.61■■■□□ 2.49
SPHK1-210ENST00000592299 COG3Q96JB2 828 aa30.6■■■□□ 2.49
SPHK1-210ENST00000592299 SSH2Q76I76 1423 aa30.6■■■□□ 2.49
SPHK1-210ENST00000592299 AEBP2Q6ZN18 517 aaPredicted RBP30.59■■■□□ 2.49
SPHK1-210ENST00000592299 MST1RQ04912 1400 aa30.59■■■□□ 2.49
SPHK1-210ENST00000592299 TTC21AQ8NDW8 1320 aa30.59■■■□□ 2.49
SPHK1-210ENST00000592299 MTHFSP49914 203 aa30.57■■■□□ 2.48
SPHK1-210ENST00000592299 PSME1Q06323 249 aa30.57■■■□□ 2.48
SPHK1-210ENST00000592299 FOXO3O43524 673 aa30.56■■■□□ 2.48
SPHK1-210ENST00000592299 PAK3O75914 559 aaPredicted RBP30.56■■■□□ 2.48
SPHK1-210ENST00000592299 CENPBP07199 599 aaPredicted RBP30.53■■■□□ 2.48
SPHK1-210ENST00000592299 HNRNPUQ00839 825 aaKnown RBP eCLIP30.52■■■□□ 2.48
SPHK1-210ENST00000592299 KIF1AQ12756 1690 aa30.51■■■□□ 2.47
SPHK1-210ENST00000592299 FBLN1P23142 703 aa30.5■■■□□ 2.47
SPHK1-210ENST00000592299 CFAP53Q96M91 514 aa30.5■■■□□ 2.47
SPHK1-210ENST00000592299 SCAF1Q9H7N4 1312 aaKnown RBP30.5■■■□□ 2.47
SPHK1-210ENST00000592299 WDR43Q15061 677 aaKnown RBP eCLIP30.5■■■□□ 2.47
SPHK1-210ENST00000592299 XPCQ01831 940 aaPredicted RBP30.49■■■□□ 2.47
SPHK1-210ENST00000592299 OVOS2A0A0J9YW53 1432 aa30.49■■■□□ 2.47
SPHK1-210ENST00000592299 OVOS2Q6IE36 1432 aa30.49■■■□□ 2.47
SPHK1-210ENST00000592299 ABTB2Q8N961 1025 aa30.48■■■□□ 2.47
SPHK1-210ENST00000592299 NLRP6P59044 892 aa30.47■■■□□ 2.47
SPHK1-210ENST00000592299 PIK3C2AO00443 1686 aa30.47■■■□□ 2.47
SPHK1-210ENST00000592299 MAP2P11137 1827 aaKnown RBP30.46■■■□□ 2.47
SPHK1-210ENST00000592299 NUTM2GQ5VZR2 741 aa30.45■■■□□ 2.47
SPHK1-210ENST00000592299 PPM1GO15355 546 aaPredicted RBP30.45■■■□□ 2.46
SPHK1-210ENST00000592299 SLAIN2Q9P270 581 aa30.45■■■□□ 2.46
SPHK1-210ENST00000592299 KRT28Q7Z3Y7 464 aa30.44■■■□□ 2.46
SPHK1-210ENST00000592299 POLKQ9UBT6 870 aa30.44■■■□□ 2.46
SPHK1-210ENST00000592299 ADAMTS8Q9UP79 889 aa30.43■■■□□ 2.46
SPHK1-210ENST00000592299 AATKQ6ZMQ8 1374 aa30.43■■■□□ 2.46
SPHK1-210ENST00000592299 USP31Q70CQ4 1352 aa30.43■■■□□ 2.46
SPHK1-210ENST00000592299 SOX12O15370 315 aa30.43■■■□□ 2.46
SPHK1-210ENST00000592299 LTBP4Q8N2S1 1624 aa30.41■■■□□ 2.46
SPHK1-210ENST00000592299 RRS1Q15050 365 aaKnown RBP30.41■■■□□ 2.46
SPHK1-210ENST00000592299 DDX17Q92841 729 aaKnown RBP30.4■■■□□ 2.46
SPHK1-210ENST00000592299 EMILIN1Q9Y6C2 1016 aa30.4■■■□□ 2.46
SPHK1-210ENST00000592299 BRINP3Q76B58 766 aa30.39■■■□□ 2.46
SPHK1-210ENST00000592299 NPHP3Q7Z494 1330 aa30.39■■■□□ 2.45
SPHK1-210ENST00000592299 LMOD2Q6P5Q4 547 aa30.38■■■□□ 2.45
SPHK1-210ENST00000592299 SHPRHQ149N8 1683 aa30.35■■■□□ 2.45
SPHK1-210ENST00000592299 SENP3-EIF4A1A0A087X0R7 540 aa30.35■■■□□ 2.45
SPHK1-210ENST00000592299 TRPM3Q9HCF6 1732 aaPredicted RBP30.35■■■□□ 2.45
SPHK1-210ENST00000592299 PNPLA6Q8IY17 1366 aa30.34■■■□□ 2.45
SPHK1-210ENST00000592299 MARF1Q9Y4F3 1742 aaKnown RBP30.33■■■□□ 2.45
SPHK1-210ENST00000592299 INSRP06213 1382 aa30.32■■■□□ 2.44
SPHK1-210ENST00000592299 SMG6Q86US8 1419 aaKnown RBP30.32■■■□□ 2.44
SPHK1-210ENST00000592299 USP54Q70EL1 1684 aa30.32■■■□□ 2.44
SPHK1-210ENST00000592299 NUDCQ9Y266 331 aa30.32■■■□□ 2.44
SPHK1-210ENST00000592299 COL3A1P02461 1466 aaPredicted RBP30.32■■■□□ 2.44
SPHK1-210ENST00000592299 DIAPH1O60610 1272 aaKnown RBP30.31■■■□□ 2.44
SPHK1-210ENST00000592299 BLMP54132 1417 aaPredicted RBP30.31■■■□□ 2.44
SPHK1-210ENST00000592299 CDK12Q9NYV4 1490 aaPredicted RBP30.3■■■□□ 2.44
SPHK1-210ENST00000592299 U2SURPO15042 1029 aaKnown RBP30.29■■■□□ 2.44
SPHK1-210ENST00000592299 PLEKHG5O94827 1062 aa30.29■■■□□ 2.44
SPHK1-210ENST00000592299 ZBED9Q6R2W3 1325 aa30.28■■■□□ 2.44
SPHK1-210ENST00000592299 U2AF1L5P0DN76 240 aaPredicted RBP30.28■■■□□ 2.44
SPHK1-210ENST00000592299 U2AF1Q01081 240 aaKnown RBP eCLIP30.28■■■□□ 2.44
SPHK1-210ENST00000592299 MAP3K19Q56UN5 1328 aa30.27■■■□□ 2.44
SPHK1-210ENST00000592299 CCDC146Q8IYE0 955 aa30.27■■■□□ 2.44
SPHK1-210ENST00000592299 SBNO1A3KN83 1393 aa30.27■■■□□ 2.44
SPHK1-210ENST00000592299 PXDNQ92626 1479 aa30.26■■■□□ 2.43
SPHK1-210ENST00000592299 SALL2Q9Y467 1007 aaPredicted RBP30.24■■■□□ 2.43
SPHK1-210ENST00000592299 ALS2Q96Q42 1657 aa30.24■■■□□ 2.43
SPHK1-210ENST00000592299 KCNH5Q8NCM2 988 aa30.24■■■□□ 2.43
SPHK1-210ENST00000592299 AMPHP49418 695 aa30.23■■■□□ 2.43
SPHK1-210ENST00000592299 TNS3Q68CZ2 1445 aa30.22■■■□□ 2.43
SPHK1-210ENST00000592299 PEAK1Q9H792 1746 aa30.21■■■□□ 2.43
SPHK1-210ENST00000592299 SPATA31A3Q5VYP0 1347 aa30.2■■■□□ 2.43
SPHK1-210ENST00000592299 HSP90AB2PQ58FF8 381 aa30.2■■■□□ 2.43
SPHK1-210ENST00000592299 GCP02774 474 aa30.19■■■□□ 2.42
SPHK1-210ENST00000592299 FLT4P35916 1363 aa30.19■■■□□ 2.42
SPHK1-210ENST00000592299 IL13P35225 146 aa30.19■■■□□ 2.42
SPHK1-210ENST00000592299 SOS2Q07890 1332 aaPredicted RBP30.18■■■□□ 2.42
SPHK1-210ENST00000592299 USP19O94966 1318 aa30.18■■■□□ 2.42
SPHK1-210ENST00000592299 NFAT5O94916 1531 aa30.17■■■□□ 2.42
SPHK1-210ENST00000592299 SLIT3O75094 1523 aa30.16■■■□□ 2.42
SPHK1-210ENST00000592299 ZBTB7CA1YPR0 619 aa30.16■■■□□ 2.42
SPHK1-210ENST00000592299 RUNDC1Q96C34 613 aa30.16■■■□□ 2.42
SPHK1-210ENST00000592299 ARHGEF10O15013 1369 aa30.16■■■□□ 2.42
SPHK1-210ENST00000592299 APAF1O14727 1248 aa30.15■■■□□ 2.42
SPHK1-210ENST00000592299 EIF4A2Q14240 407 aaKnown RBP30.15■■■□□ 2.42
SPHK1-210ENST00000592299 LTN1O94822 1766 aa30.15■■■□□ 2.42
SPHK1-210ENST00000592299 NHSL1Q5SYE7 1610 aa30.14■■■□□ 2.42
SPHK1-210ENST00000592299 ROBO1Q9Y6N7 1651 aa30.14■■■□□ 2.41
SPHK1-210ENST00000592299 KIF24Q5T7B8 1368 aa30.14■■■□□ 2.41
SPHK1-210ENST00000592299 HOXC9P31274 260 aa30.13■■■□□ 2.41
SPHK1-210ENST00000592299 MED1Q15648 1581 aaPredicted RBP30.12■■■□□ 2.41
SPHK1-210ENST00000592299 TOM1O60784 492 aa30.1■■■□□ 2.41
SPHK1-210ENST00000592299 CABLES1Q8TDN4 633 aa30.1■■■□□ 2.41
SPHK1-210ENST00000592299 HMOX1P09601 288 aa30.1■■■□□ 2.41
SPHK1-210ENST00000592299 PNNQ9H307 717 aaKnown RBP30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms