RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 PDE3BQ13370 1112 aa14.32□□□□□ -0.12
SMARCA4-218ENST00000592158 RGPD3A6NKT7 1758 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-218ENST00000592158 RGPD4Q7Z3J3 1758 aa14.32□□□□□ -0.12
SMARCA4-218ENST00000592158 RRP7BPQ9NSQ0 103 aa14.31□□□□□ -0.12
SMARCA4-218ENST00000592158 ADCY9O60503 1353 aa14.31□□□□□ -0.12
SMARCA4-218ENST00000592158 PLSCR1O15162 318 aa14.3□□□□□ -0.12
SMARCA4-218ENST00000592158 YBX3P16989 372 aaKnown RBP eCLIP14.3□□□□□ -0.121e-7■■□□□ 13.4
SMARCA4-218ENST00000592158 KRT28Q7Z3Y7 464 aa14.29□□□□□ -0.12
SMARCA4-218ENST00000592158 STK32BQ9NY57 414 aa14.29□□□□□ -0.12
SMARCA4-218ENST00000592158 CCDC144AA2RUR9 1427 aa14.28□□□□□ -0.12
SMARCA4-218ENST00000592158 HSPA1AP0DMV8 641 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-218ENST00000592158 HSPA1BP0DMV9 641 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-218ENST00000592158 COL14A1Q05707 1796 aaKnown RBP14.27□□□□□ -0.12
SMARCA4-218ENST00000592158 TNS3Q68CZ2 1445 aa14.27□□□□□ -0.12
SMARCA4-218ENST00000592158 ROBO2Q9HCK4 1378 aa14.27□□□□□ -0.12
SMARCA4-218ENST00000592158 SPATA31A1Q5TZJ5 1347 aa14.27□□□□□ -0.12
SMARCA4-218ENST00000592158 SLC15A2Q16348 729 aa14.27□□□□□ -0.13
SMARCA4-218ENST00000592158 RRBP1Q9P2E9 1410 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-218ENST00000592158 NUTM2FA1L443 756 aa14.26□□□□□ -0.13
SMARCA4-218ENST00000592158 LMOD2Q6P5Q4 547 aa14.26□□□□□ -0.13
SMARCA4-218ENST00000592158 NLGN2Q8NFZ4 835 aa14.26□□□□□ -0.13
SMARCA4-218ENST00000592158 TOMM70O94826 608 aa14.25□□□□□ -0.13
SMARCA4-218ENST00000592158 PROM2Q8N271 834 aa14.25□□□□□ -0.13
SMARCA4-218ENST00000592158 CDC42BPGQ6DT37 1551 aa14.23□□□□□ -0.13
SMARCA4-218ENST00000592158 PSME1Q06323 249 aa14.2□□□□□ -0.14
SMARCA4-218ENST00000592158 HFM1A2PYH4 1435 aa14.19□□□□□ -0.14
SMARCA4-218ENST00000592158 MLLT1Q03111 559 aaPredicted RBP14.19□□□□□ -0.14
SMARCA4-218ENST00000592158 USP35Q9P2H5 1018 aa14.19□□□□□ -0.14
SMARCA4-218ENST00000592158 KIF1AQ12756 1690 aa14.19□□□□□ -0.14
SMARCA4-218ENST00000592158 ARHGEF10O15013 1369 aa14.19□□□□□ -0.14
SMARCA4-218ENST00000592158 TECPR2O15040 1411 aa14.18□□□□□ -0.14
SMARCA4-218ENST00000592158 IQGAP3Q86VI3 1631 aa14.18□□□□□ -0.14
SMARCA4-218ENST00000592158 SBF2Q86WG5 1849 aa14.18□□□□□ -0.14
SMARCA4-218ENST00000592158 KIAA1210Q9ULL0 1709 aa14.16□□□□□ -0.14
SMARCA4-218ENST00000592158 C11orf95C9JLR9 678 aaPredicted RBP14.16□□□□□ -0.14
SMARCA4-218ENST00000592158 TXNRD1Q16881 649 aa14.16□□□□□ -0.14
SMARCA4-218ENST00000592158 BARGINQ6ZT62 677 aa14.16□□□□□ -0.14
SMARCA4-218ENST00000592158 STRN4Q9NRL3 753 aa14.16□□□□□ -0.14
SMARCA4-218ENST00000592158 SBNO1A3KN83 1393 aa14.16□□□□□ -0.14
SMARCA4-218ENST00000592158 POLD1P28340 1107 aa14.15□□□□□ -0.14
SMARCA4-218ENST00000592158 PTF1AQ7RTS3 328 aa14.15□□□□□ -0.14
SMARCA4-218ENST00000592158 ARHGEF28Q8N1W1 1705 aaKnown RBP14.13□□□□□ -0.15
SMARCA4-218ENST00000592158 NAIPQ13075 1403 aa14.13□□□□□ -0.15
SMARCA4-218ENST00000592158 MYOM3Q5VTT5 1437 aa14.13□□□□□ -0.15
SMARCA4-218ENST00000592158 ZNF326Q5BKZ1 582 aaKnown RBP14.12□□□□□ -0.15
SMARCA4-218ENST00000592158 PRDM11Q9NQV5 511 aa14.12□□□□□ -0.15
SMARCA4-218ENST00000592158 PRAG1Q86YV5 1406 aa14.12□□□□□ -0.15
SMARCA4-218ENST00000592158 USP19O94966 1318 aa14.12□□□□□ -0.15
SMARCA4-218ENST00000592158 DHX57Q6P158 1386 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-218ENST00000592158 OVOS2A0A0G2JMS6 1433 aa14.11□□□□□ -0.15
SMARCA4-218ENST00000592158 OVOS2A0A0J9YW53 1432 aa14.11□□□□□ -0.15
SMARCA4-218ENST00000592158 OVOS2Q6IE36 1432 aa14.11□□□□□ -0.15
SMARCA4-218ENST00000592158 PEAK1Q9H792 1746 aa14.1□□□□□ -0.15
SMARCA4-218ENST00000592158 RBM46Q8TBY0 533 aaKnown RBP14.1□□□□□ -0.15
SMARCA4-218ENST00000592158 TOPAZ1Q8N9V7 1692 aa14.09□□□□□ -0.15
SMARCA4-218ENST00000592158 PHF8Q9UPP1 1060 aa14.08□□□□□ -0.16
SMARCA4-218ENST00000592158 COL24A1Q17RW2 1714 aa14.07□□□□□ -0.16
SMARCA4-218ENST00000592158 TULP4Q9NRJ4 1543 aa14.07□□□□□ -0.16
SMARCA4-218ENST00000592158 RGS19P49795 217 aa14.07□□□□□ -0.16
SMARCA4-218ENST00000592158 PMFBP1Q8TBY8 1022 aa14.07□□□□□ -0.16
SMARCA4-218ENST00000592158 FMN2Q9NZ56 1722 aa14.07□□□□□ -0.16
SMARCA4-218ENST00000592158 RGPD8O14715 1765 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-218ENST00000592158 FSTL1Q12841 308 aa14.06□□□□□ -0.16
SMARCA4-218ENST00000592158 CHRNA2Q15822 529 aa14.06□□□□□ -0.16
SMARCA4-218ENST00000592158 TCP11L2Q8N4U5 519 aa14.06□□□□□ -0.16
SMARCA4-218ENST00000592158 SLC16A10Q8TF71 515 aa14.06□□□□□ -0.16
SMARCA4-218ENST00000592158 E9PCH4 1651 aa14.06□□□□□ -0.16
SMARCA4-218ENST00000592158 PARP4Q9UKK3 1724 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-218ENST00000592158 ABHD8Q96I13 439 aa14.05□□□□□ -0.16
SMARCA4-218ENST00000592158 NMRK2Q9NPI5 230 aa14.05□□□□□ -0.16
SMARCA4-218ENST00000592158 PDE4DIPQ5VU43 2346 aa14.05□□□□□ -0.16
SMARCA4-218ENST00000592158 EVA1CP58658 441 aa14.04□□□□□ -0.16
SMARCA4-218ENST00000592158 C16orf71Q8IYS4 520 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-218ENST00000592158 PRDM10Q9NQV6 1147 aa14.04□□□□□ -0.16
SMARCA4-218ENST00000592158 TNRC18O15417 2968 aaPredicted RBP14.03□□□□□ -0.16
SMARCA4-218ENST00000592158 ATP7BP35670 1465 aa14.02□□□□□ -0.16
SMARCA4-218ENST00000592158 NRXN1Q9ULB1 1477 aa14.02□□□□□ -0.16
SMARCA4-218ENST00000592158 SSH2Q76I76 1423 aa14.02□□□□□ -0.16
SMARCA4-218ENST00000592158 ANKRD30AQ9BXX3 1397 aa14.02□□□□□ -0.17
SMARCA4-218ENST00000592158 CHIC2Q9UKJ5 165 aa14.02□□□□□ -0.17
SMARCA4-218ENST00000592158 KIAA0232Q92628 1395 aa14.01□□□□□ -0.17
SMARCA4-218ENST00000592158 ZNF827Q17R98 1081 aa14.01□□□□□ -0.17
SMARCA4-218ENST00000592158 LARP1Q6PKG0 1096 aaKnown RBP14.01□□□□□ -0.17
SMARCA4-218ENST00000592158 PAPPAQ13219 1627 aa14.01□□□□□ -0.17
SMARCA4-218ENST00000592158 WAPLQ7Z5K2 1190 aa14□□□□□ -0.17
SMARCA4-218ENST00000592158 THRAP3Q9Y2W1 955 aaKnown RBP14□□□□□ -0.17
SMARCA4-218ENST00000592158 CRYBG1Q9Y4K1 1723 aa14□□□□□ -0.17
SMARCA4-218ENST00000592158 ALS2Q96Q42 1657 aa13.99□□□□□ -0.17
SMARCA4-218ENST00000592158 FOXN1O15353 648 aa13.99□□□□□ -0.17
SMARCA4-218ENST00000592158 TRPM3Q9HCF6 1732 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-218ENST00000592158 CCDC85CA6NKD9 419 aa13.97□□□□□ -0.17
SMARCA4-218ENST00000592158 DAPK1P53355 1430 aa13.97□□□□□ -0.17
SMARCA4-218ENST00000592158 PHRF1Q9P1Y6 1649 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-218ENST00000592158 DDB1Q16531 1140 aa13.95□□□□□ -0.18
SMARCA4-218ENST00000592158 LRRC37A3O60309 1634 aa13.94□□□□□ -0.18
SMARCA4-218ENST00000592158 ZC3H6P61129 1189 aaKnown RBP13.94□□□□□ -0.18
SMARCA4-218ENST00000592158 QSER1Q2KHR3 1735 aa13.94□□□□□ -0.18
SMARCA4-218ENST00000592158 PLEKHH1Q9ULM0 1364 aa13.93□□□□□ -0.18
SMARCA4-218ENST00000592158 MARCH10Q8NA82 808 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-218ENST00000592158 IFT172Q9UG01 1749 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms