RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 FER1L4A9Z1Z3 1794 aa20.54■□□□□ 0.88
MBD1-227ENST00000592060 BCAR3O75815 825 aa20.54■□□□□ 0.88
MBD1-227ENST00000592060 NEUROD2Q15784 382 aa20.54■□□□□ 0.88
MBD1-227ENST00000592060 TXNDC2Q86VQ3 553 aa20.54■□□□□ 0.88
MBD1-227ENST00000592060 PLEKHG1Q9ULL1 1385 aa20.53■□□□□ 0.88
MBD1-227ENST00000592060 KDM2BQ8NHM5 1336 aa20.53■□□□□ 0.88
MBD1-227ENST00000592060 TCERG1O14776 1098 aaKnown RBP20.53■□□□□ 0.88
MBD1-227ENST00000592060 PLEKHF1Q96S99 279 aa20.53■□□□□ 0.88
MBD1-227ENST00000592060 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.51■□□□□ 0.87
MBD1-227ENST00000592060 MAP2P11137 1827 aaKnown RBP20.51■□□□□ 0.87
MBD1-227ENST00000592060 TOPAZ1Q8N9V7 1692 aa20.51■□□□□ 0.87
MBD1-227ENST00000592060 SLIT1O75093 1534 aa20.5■□□□□ 0.87
MBD1-227ENST00000592060 ANP32EQ9BTT0 268 aa20.5■□□□□ 0.87
MBD1-227ENST00000592060 ROBO2Q9HCK4 1378 aa20.5■□□□□ 0.87
MBD1-227ENST00000592060 ARHGAP23Q9P227 1491 aa20.49■□□□□ 0.87
MBD1-227ENST00000592060 LRRC7Q96NW7 1537 aa20.48■□□□□ 0.87
MBD1-227ENST00000592060 U2SURPO15042 1029 aaKnown RBP20.48■□□□□ 0.87
MBD1-227ENST00000592060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.48■□□□□ 0.87
MBD1-227ENST00000592060 NUDT16Q96DE0 195 aaKnown RBP20.48■□□□□ 0.87
MBD1-227ENST00000592060 NRKQ7Z2Y5 1582 aa20.48■□□□□ 0.87
MBD1-227ENST00000592060 DIAPH1O60610 1272 aaKnown RBP20.47■□□□□ 0.87
MBD1-227ENST00000592060 MS4A1P11836 297 aa20.47■□□□□ 0.87
MBD1-227ENST00000592060 LTKP29376 864 aa20.47■□□□□ 0.87
MBD1-227ENST00000592060 PDE3AQ14432 1141 aa20.46■□□□□ 0.87
MBD1-227ENST00000592060 CENPQQ7L2Z9 268 aaPredicted RBP20.46■□□□□ 0.87
MBD1-227ENST00000592060 TMPOP42166 694 aaKnown RBP20.45■□□□□ 0.86
MBD1-227ENST00000592060 RARSP54136 660 aaKnown RBP20.45■□□□□ 0.86
MBD1-227ENST00000592060 POLKQ9UBT6 870 aa20.45■□□□□ 0.86
MBD1-227ENST00000592060 PRR36Q9H6K5 1346 aa20.45■□□□□ 0.86
MBD1-227ENST00000592060 CDK12Q9NYV4 1490 aaPredicted RBP20.45■□□□□ 0.86
MBD1-227ENST00000592060 CEBPAP49715 358 aaPredicted RBP20.45■□□□□ 0.86
MBD1-227ENST00000592060 MYH16Q9H6N6 1097 aa20.45■□□□□ 0.86
MBD1-227ENST00000592060 PTPRUQ92729 1446 aa20.44■□□□□ 0.86
MBD1-227ENST00000592060 CCDC61Q9Y6R9 512 aa20.44■□□□□ 0.86
MBD1-227ENST00000592060 TRIM35Q9UPQ4 493 aa20.43■□□□□ 0.86
MBD1-227ENST00000592060 AATKQ6ZMQ8 1374 aa20.43■□□□□ 0.86
MBD1-227ENST00000592060 NCKAP5LQ9HCH0 1330 aa20.43■□□□□ 0.86
MBD1-227ENST00000592060 MAPK8IP3Q9UPT6 1336 aa20.43■□□□□ 0.86
MBD1-227ENST00000592060 NME9Q86XW9 330 aa20.42■□□□□ 0.86
MBD1-227ENST00000592060 DIP2AQ14689 1571 aa20.41■□□□□ 0.86
MBD1-227ENST00000592060 IL16Q14005 1332 aa20.39■□□□□ 0.86
MBD1-227ENST00000592060 FBLN1P23142 703 aa20.39■□□□□ 0.86
MBD1-227ENST00000592060 SKAP1Q86WV1 359 aa20.39■□□□□ 0.86
MBD1-227ENST00000592060 PNNQ9H307 717 aaKnown RBP20.39■□□□□ 0.86
MBD1-227ENST00000592060 PDE4AP27815 886 aa20.39■□□□□ 0.85
MBD1-227ENST00000592060 ZRANB1Q9UGI0 708 aa20.39■□□□□ 0.85
MBD1-227ENST00000592060 FCHSD2O94868 740 aa20.38■□□□□ 0.85
MBD1-227ENST00000592060 MYT1Q01538 1121 aa20.38■□□□□ 0.85
MBD1-227ENST00000592060 BACH2Q9BYV9 841 aa20.38■□□□□ 0.85
MBD1-227ENST00000592060 RSPH6AQ9H0K4 717 aa20.38■□□□□ 0.85
MBD1-227ENST00000592060 NALCNQ8IZF0 1738 aa20.37■□□□□ 0.85
MBD1-227ENST00000592060 PTCH1Q13635 1447 aa20.37■□□□□ 0.85
MBD1-227ENST00000592060 XRN1Q8IZH2 1706 aaKnown RBP20.37■□□□□ 0.85
MBD1-227ENST00000592060 CT47B1P0C2W7 299 aaPredicted RBP20.37■□□□□ 0.85
MBD1-227ENST00000592060 CANXP27824 592 aaKnown RBP20.37■□□□□ 0.85
MBD1-227ENST00000592060 PANK1Q8TE04 598 aa20.37■□□□□ 0.85
MBD1-227ENST00000592060 EMILIN1Q9Y6C2 1016 aa20.37■□□□□ 0.85
MBD1-227ENST00000592060 ZNF692Q9BU19 519 aaPredicted RBP20.36■□□□□ 0.85
MBD1-227ENST00000592060 EID1Q9Y6B2 187 aa20.36■□□□□ 0.85
MBD1-227ENST00000592060 TSR2Q969E8 191 aaKnown RBP20.35■□□□□ 0.85
MBD1-227ENST00000592060 RIMS1Q86UR5 1692 aaKnown RBP20.34■□□□□ 0.85
MBD1-227ENST00000592060 IL13P35225 146 aa20.34■□□□□ 0.85
MBD1-227ENST00000592060 RIPK4P57078 832 aa20.34■□□□□ 0.85
MBD1-227ENST00000592060 COG3Q96JB2 828 aa20.34■□□□□ 0.85
MBD1-227ENST00000592060 SLC26A8Q96RN1 970 aa20.34■□□□□ 0.85
MBD1-227ENST00000592060 COG6Q9Y2V7 657 aa20.34■□□□□ 0.85
MBD1-227ENST00000592060 PPM1GO15355 546 aaPredicted RBP20.34■□□□□ 0.85
MBD1-227ENST00000592060 FRAT1Q92837 279 aaPredicted RBP20.34■□□□□ 0.85
MBD1-227ENST00000592060 TBX22Q9Y458 520 aa20.34■□□□□ 0.85
MBD1-227ENST00000592060 OVOS2A0A0J9YW53 1432 aa20.33■□□□□ 0.85
MBD1-227ENST00000592060 OVOS2Q6IE36 1432 aa20.33■□□□□ 0.85
MBD1-227ENST00000592060 PLEKHG3A1L390 1219 aa20.33■□□□□ 0.84
MBD1-227ENST00000592060 PRKAR2BP31323 418 aa20.33■□□□□ 0.84
MBD1-227ENST00000592060 ANP32AP39687 249 aaKnown RBP20.33■□□□□ 0.84
MBD1-227ENST00000592060 CLUAP1Q96AJ1 413 aa20.33■□□□□ 0.84
MBD1-227ENST00000592060 TNNQ9UQP3 1299 aa20.32■□□□□ 0.84
MBD1-227ENST00000592060 USP6P35125 1406 aa20.32■□□□□ 0.84
MBD1-227ENST00000592060 RLBP1P12271 317 aa20.32■□□□□ 0.84
MBD1-227ENST00000592060 BCL2L13Q9BXK5 485 aa20.32■□□□□ 0.84
MBD1-227ENST00000592060 DLG5Q8TDM6 1919 aa20.31■□□□□ 0.84
MBD1-227ENST00000592060 EXOSC9Q06265 439 aaKnown RBP20.31■□□□□ 0.84
MBD1-227ENST00000592060 CEP170BQ9Y4F5 1589 aaPredicted RBP20.31■□□□□ 0.84
MBD1-227ENST00000592060 TTC21BQ7Z4L5 1316 aa20.31■□□□□ 0.84
MBD1-227ENST00000592060 AAMPQ13685 434 aa20.3■□□□□ 0.84
MBD1-227ENST00000592060 ACEP12821 1306 aa20.3■□□□□ 0.84
MBD1-227ENST00000592060 SSH2Q76I76 1423 aa20.3■□□□□ 0.84
MBD1-227ENST00000592060 IGHDP01880 384 aa20.29■□□□□ 0.84
MBD1-227ENST00000592060 THEMISQ8N1K5 641 aaPredicted RBP20.29■□□□□ 0.84
MBD1-227ENST00000592060 AMOTL2Q9Y2J4 779 aa20.29■□□□□ 0.84
MBD1-227ENST00000592060 RGPD8O14715 1765 aaPredicted RBP20.29■□□□□ 0.84
MBD1-227ENST00000592060 PEAK1Q9H792 1746 aa20.28■□□□□ 0.84
MBD1-227ENST00000592060 NFE2L2Q16236 605 aa20.28■□□□□ 0.84
MBD1-227ENST00000592060 IPO9Q96P70 1041 aaKnown RBP20.28■□□□□ 0.84
MBD1-227ENST00000592060 RRS1Q15050 365 aaKnown RBP20.28■□□□□ 0.84
MBD1-227ENST00000592060 HMOX1P09601 288 aa20.27■□□□□ 0.84
MBD1-227ENST00000592060 PHACTR3Q96KR7 559 aa20.27■□□□□ 0.84
MBD1-227ENST00000592060 NOP58Q9Y2X3 529 aaKnown RBP20.27■□□□□ 0.84
MBD1-227ENST00000592060 ERICH6Q7L0X2 663 aa20.26■□□□□ 0.83
MBD1-227ENST00000592060 VIRMAQ69YN4 1812 aaKnown RBP20.26■□□□□ 0.83
MBD1-227ENST00000592060 RGPD1P0DJD0 1748 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms