RNA–Protein interactions for RNA: ENST00000592054.5

DNMT1-226, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-226ENST00000592054 MAPKBP1O60336 1514 aa6.6□□□□□ -1.35
DNMT1-226ENST00000592054 WDR97A6NE52 1622 aa6.59□□□□□ -1.35
DNMT1-226ENST00000592054 SLC16A10Q8TF71 515 aa6.59□□□□□ -1.35
DNMT1-226ENST00000592054 HPS1Q92902 700 aa6.59□□□□□ -1.35
DNMT1-226ENST00000592054 TDRD9Q8NDG6 1382 aaKnown RBP6.58□□□□□ -1.36
DNMT1-226ENST00000592054 CEP170Q5SW79 1584 aa6.58□□□□□ -1.36
DNMT1-226ENST00000592054 GNPATO15228 680 aa6.58□□□□□ -1.36
DNMT1-226ENST00000592054 GPR37O15354 613 aa6.58□□□□□ -1.36
DNMT1-226ENST00000592054 CCDC24Q8N4L8 307 aa6.58□□□□□ -1.36
DNMT1-226ENST00000592054 REPIN1Q9BWE0 567 aaKnown RBP6.58□□□□□ -1.36
DNMT1-226ENST00000592054 Q3C1V9 767 aa6.57□□□□□ -1.36
DNMT1-226ENST00000592054 POLA1P09884 1462 aaPredicted RBP6.56□□□□□ -1.36
DNMT1-226ENST00000592054 RC3H1Q5TC82 1133 aaKnown RBP6.56□□□□□ -1.36
DNMT1-226ENST00000592054 GRIN2BQ13224 1484 aa6.55□□□□□ -1.36
DNMT1-226ENST00000592054 SLC24A1O60721 1099 aa6.55□□□□□ -1.36
DNMT1-226ENST00000592054 SMYD5Q6GMV2 418 aa6.55□□□□□ -1.36
DNMT1-226ENST00000592054 PBRM1Q86U86 1689 aa6.55□□□□□ -1.36
DNMT1-226ENST00000592054 ALDH1A1P00352 501 aa6.54□□□□□ -1.36
DNMT1-226ENST00000592054 MMP16P51512 607 aa6.54□□□□□ -1.36
DNMT1-226ENST00000592054 ZSCAN1Q8NBB4 408 aa6.54□□□□□ -1.36
DNMT1-226ENST00000592054 NXF1Q9UBU9 619 aaKnown RBP6.54□□□□□ -1.36
DNMT1-226ENST00000592054 RAD54L2Q9Y4B4 1467 aa6.53□□□□□ -1.36
DNMT1-226ENST00000592054 PCF11O94913 1555 aaKnown RBP6.53□□□□□ -1.36
DNMT1-226ENST00000592054 GMPRP36959 345 aa6.53□□□□□ -1.36
DNMT1-226ENST00000592054 GPIHBP1Q8IV16 184 aa6.53□□□□□ -1.36
DNMT1-226ENST00000592054 PHOX2BQ99453 314 aa6.53□□□□□ -1.36
DNMT1-226ENST00000592054 USB1Q9BQ65 265 aaKnown RBP6.53□□□□□ -1.36
DNMT1-226ENST00000592054 SOGA1O94964 1423 aa6.52□□□□□ -1.37
DNMT1-226ENST00000592054 SHROOM2Q13796 1616 aa6.52□□□□□ -1.37
DNMT1-226ENST00000592054 VEGFBP49765 207 aa6.52□□□□□ -1.37
DNMT1-226ENST00000592054 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.52□□□□□ -1.37
DNMT1-226ENST00000592054 IRF7Q92985 503 aa6.52□□□□□ -1.37
DNMT1-226ENST00000592054 DXOO77932 396 aaKnown RBP6.51□□□□□ -1.37
DNMT1-226ENST00000592054 BMP1P13497 986 aa6.51□□□□□ -1.37
DNMT1-226ENST00000592054 SKOR1P84550 965 aa6.51□□□□□ -1.37
DNMT1-226ENST00000592054 PPRC1Q5VV67 1664 aaKnown RBP6.51□□□□□ -1.37
DNMT1-226ENST00000592054 WNT7BP56706 349 aa6.5□□□□□ -1.37
DNMT1-226ENST00000592054 WASF2Q9Y6W5 498 aa6.5□□□□□ -1.37
DNMT1-226ENST00000592054 CAPN5O15484 640 aaPredicted RBP6.49□□□□□ -1.37
DNMT1-226ENST00000592054 KDM4AO75164 1064 aa6.49□□□□□ -1.37
DNMT1-226ENST00000592054 ADCY10Q96PN6 1610 aa6.49□□□□□ -1.37
DNMT1-226ENST00000592054 EHBP1Q8NDI1 1231 aa6.48□□□□□ -1.37
DNMT1-226ENST00000592054 PTPRMP28827 1452 aa6.47□□□□□ -1.37
DNMT1-226ENST00000592054 KIF21BO75037 1637 aa6.47□□□□□ -1.37
DNMT1-226ENST00000592054 CD46P15529 392 aa6.47□□□□□ -1.37
DNMT1-226ENST00000592054 TRIM46Q7Z4K8 759 aa6.47□□□□□ -1.37
DNMT1-226ENST00000592054 NPAS3Q8IXF0 933 aa6.47□□□□□ -1.37
DNMT1-226ENST00000592054 GRIN2AQ12879 1464 aa6.47□□□□□ -1.37
DNMT1-226ENST00000592054 PRG4Q92954 1404 aaPredicted RBP6.46□□□□□ -1.38
DNMT1-226ENST00000592054 HLA-CQ95604 372 aa6.46□□□□□ -1.38
DNMT1-226ENST00000592054 TEX14Q8IWB6 1497 aa6.46□□□□□ -1.38
DNMT1-226ENST00000592054 TOP2AP11388 1531 aaKnown RBP6.45□□□□□ -1.38
DNMT1-226ENST00000592054 H3BM21 787 aa6.45□□□□□ -1.38
DNMT1-226ENST00000592054 TULP1O00294 542 aaPredicted RBP6.45□□□□□ -1.38
DNMT1-226ENST00000592054 LORP23490 312 aaPredicted RBP6.45□□□□□ -1.38
DNMT1-226ENST00000592054 COL17A1Q9UMD9 1497 aaPredicted RBP6.45□□□□□ -1.38
DNMT1-226ENST00000592054 JUNDP17535 347 aa6.44□□□□□ -1.38
DNMT1-226ENST00000592054 NUDT12Q9BQG2 462 aa6.44□□□□□ -1.38
DNMT1-226ENST00000592054 ERBB4Q15303 1308 aa6.44□□□□□ -1.38
DNMT1-226ENST00000592054 GLI2P10070 1586 aa6.44□□□□□ -1.38
DNMT1-226ENST00000592054 NUP160Q12769 1436 aa6.43□□□□□ -1.38
DNMT1-226ENST00000592054 FGD5Q6ZNL6 1462 aa6.43□□□□□ -1.38
DNMT1-226ENST00000592054 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
DNMT1-226ENST00000592054 SIAH2O43255 324 aa6.43□□□□□ -1.38
DNMT1-226ENST00000592054 HSPA2P54652 639 aa6.43□□□□□ -1.38
DNMT1-226ENST00000592054 USP46P62068 366 aa6.43□□□□□ -1.38
DNMT1-226ENST00000592054 GUCA2AQ02747 115 aa6.43□□□□□ -1.38
DNMT1-226ENST00000592054 ZC3H15Q8WU90 426 aaKnown RBP6.43□□□□□ -1.38
DNMT1-226ENST00000592054 SYMPKQ92797 1274 aaKnown RBP6.43□□□□□ -1.38
DNMT1-226ENST00000592054 ZFP42Q96MM3 310 aa6.43□□□□□ -1.38
DNMT1-226ENST00000592054 KRTAP4-6Q9BYQ5 205 aa6.43□□□□□ -1.38
DNMT1-226ENST00000592054 HOXA2O43364 376 aa6.42□□□□□ -1.38
DNMT1-226ENST00000592054 PTCRAQ6ISU1 281 aaPredicted RBP6.42□□□□□ -1.38
DNMT1-226ENST00000592054 ADAMTSL3P82987 1691 aa6.42□□□□□ -1.38
DNMT1-226ENST00000592054 IRF6O14896 467 aa6.41□□□□□ -1.38
DNMT1-226ENST00000592054 MDM2Q00987 491 aaPredicted RBP6.41□□□□□ -1.38
DNMT1-226ENST00000592054 MAP2K5Q13163 448 aa6.41□□□□□ -1.38
DNMT1-226ENST00000592054 MAP3K4Q9Y6R4 1608 aa6.4□□□□□ -1.38
DNMT1-226ENST00000592054 SH3BP2P78314 561 aa6.4□□□□□ -1.38
DNMT1-226ENST00000592054 SCARF1Q14162 830 aa6.4□□□□□ -1.38
DNMT1-226ENST00000592054 CCDC102AQ96A19 550 aa6.4□□□□□ -1.38
DNMT1-226ENST00000592054 MED1Q15648 1581 aaPredicted RBP6.4□□□□□ -1.39
DNMT1-226ENST00000592054 ZMYND10O75800 440 aa6.39□□□□□ -1.39
DNMT1-226ENST00000592054 SUZ12Q15022 739 aaKnown RBP6.39□□□□□ -1.39
DNMT1-226ENST00000592054 TLL2Q9Y6L7 1015 aa6.39□□□□□ -1.39
DNMT1-226ENST00000592054 PLB1Q6P1J6 1458 aa6.39□□□□□ -1.39
DNMT1-226ENST00000592054 ADAMTS12P58397 1594 aa6.39□□□□□ -1.39
DNMT1-226ENST00000592054 ABCA5Q8WWZ7 1642 aa6.39□□□□□ -1.39
DNMT1-226ENST00000592054 SOBPA7XYQ1 873 aa6.38□□□□□ -1.39
DNMT1-226ENST00000592054 C6orf229H3BNL8 230 aa6.38□□□□□ -1.39
DNMT1-226ENST00000592054 LINC01559Q495D7 138 aa6.38□□□□□ -1.39
DNMT1-226ENST00000592054 MRPL14Q6P1L8 145 aaKnown RBP6.38□□□□□ -1.39
DNMT1-226ENST00000592054 BARGINQ6ZT62 677 aa6.38□□□□□ -1.39
DNMT1-226ENST00000592054 RETREG3Q86VR2 466 aa6.38□□□□□ -1.39
DNMT1-226ENST00000592054 NUTM1Q86Y26 1132 aa6.38□□□□□ -1.39
DNMT1-226ENST00000592054 PURBQ96QR8 312 aaKnown RBP6.38□□□□□ -1.39
DNMT1-226ENST00000592054 MADDQ8WXG6 1647 aa6.38□□□□□ -1.39
DNMT1-226ENST00000592054 CUL7Q14999 1698 aa6.37□□□□□ -1.39
DNMT1-226ENST00000592054 RIMS1Q86UR5 1692 aaKnown RBP6.37□□□□□ -1.39
DNMT1-226ENST00000592054 KIAA0586Q9BVV6 1533 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms