RNA–Protein interactions for RNA: ENST00000591659.5

CIRBP-234, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-234	ENST00000591659	PLEKHG3	A1L390	1219 aa		29.47	■■■□□ 2.31
CIRBP-234	ENST00000591659	CABP2	Q9NPB3	220 aa		29.47	■■■□□ 2.31
CIRBP-234	ENST00000591659	UNC5CL	Q8IV45	518 aa		29.46	■■■□□ 2.31
CIRBP-234	ENST00000591659	UPF1	Q92900	1129 aa	Known RBP eCLIP	29.44	■■■□□ 2.3
CIRBP-234	ENST00000591659	PPIP5K1	Q6PFW1	1433 aa		29.44	■■■□□ 2.3
CIRBP-234	ENST00000591659	CRYBG1	Q9Y4K1	1723 aa		29.43	■■■□□ 2.3
CIRBP-234	ENST00000591659	GJD4	Q96KN9	370 aa	Predicted RBP	29.43	■■■□□ 2.3
CIRBP-234	ENST00000591659	PLCH1	Q4KWH8	1693 aa		29.43	■■■□□ 2.3
CIRBP-234	ENST00000591659	FAM83G	A6ND36	823 aa		29.4	■■■□□ 2.3
CIRBP-234	ENST00000591659	RALGAPB	Q86X10	1494 aa		29.39	■■■□□ 2.3
CIRBP-234	ENST00000591659	NWD2	Q9ULI1	1742 aa		29.39	■■■□□ 2.3
CIRBP-234	ENST00000591659	GLI3	P10071	1580 aa		29.39	■■■□□ 2.29
CIRBP-234	ENST00000591659	EVC2	Q86UK5	1308 aa		29.38	■■■□□ 2.29
CIRBP-234	ENST00000591659	CARD11	Q9BXL7	1154 aa		29.36	■■■□□ 2.29
CIRBP-234	ENST00000591659	VPS72	Q15906	364 aa		29.34	■■■□□ 2.29
CIRBP-234	ENST00000591659	NUTM2G	Q5VZR2	741 aa		29.34	■■■□□ 2.29
CIRBP-234	ENST00000591659	CABP1	Q9NZU7	370 aa		29.34	■■■□□ 2.29
CIRBP-234	ENST00000591659	PHRF1	Q9P1Y6	1649 aa	Known RBP	29.34	■■■□□ 2.29
CIRBP-234	ENST00000591659	COL14A1	Q05707	1796 aa	Known RBP	29.33	■■■□□ 2.29
CIRBP-234	ENST00000591659	NRAP	Q86VF7	1730 aa		29.31	■■■□□ 2.28
CIRBP-234	ENST00000591659	BTG4	Q9NY30	223 aa		29.31	■■■□□ 2.28
CIRBP-234	ENST00000591659	ATAD2	Q6PL18	1390 aa		29.3	■■■□□ 2.28
CIRBP-234	ENST00000591659	SBNO2	Q9Y2G9	1366 aa		29.3	■■■□□ 2.28
CIRBP-234	ENST00000591659	USP6	P35125	1406 aa		29.29	■■■□□ 2.28
CIRBP-234	ENST00000591659	ABTB2	Q8N961	1025 aa		29.29	■■■□□ 2.28
CIRBP-234	ENST00000591659	PRDM11	Q9NQV5	511 aa		29.29	■■■□□ 2.28
CIRBP-234	ENST00000591659	CCDC9	Q9Y3X0	531 aa	Known RBP	29.28	■■■□□ 2.28
CIRBP-234	ENST00000591659	BRD4	O60885	1362 aa	Predicted RBP	29.27	■■■□□ 2.28
CIRBP-234	ENST00000591659	KIAA0232	Q92628	1395 aa		29.27	■■■□□ 2.28
CIRBP-234	ENST00000591659	NRK	Q7Z2Y5	1582 aa		29.26	■■■□□ 2.28
CIRBP-234	ENST00000591659	USP19	O94966	1318 aa		29.25	■■■□□ 2.27
CIRBP-234	ENST00000591659	SSH2	Q76I76	1423 aa		29.23	■■■□□ 2.27
CIRBP-234	ENST00000591659	ZC3H6	P61129	1189 aa	Known RBP	29.23	■■■□□ 2.27
CIRBP-234	ENST00000591659	CHRNA2	Q15822	529 aa		29.23	■■■□□ 2.27
CIRBP-234	ENST00000591659	NLRP13	Q86W25	1043 aa		29.21	■■■□□ 2.27
CIRBP-234	ENST00000591659	SEPT12	Q8IYM1	358 aa		29.21	■■■□□ 2.27
CIRBP-234	ENST00000591659	ONECUT3	O60422	494 aa	Predicted RBP	29.2	■■■□□ 2.26
CIRBP-234	ENST00000591659	CPD	O75976	1380 aa		29.17	■■■□□ 2.26
CIRBP-234	ENST00000591659	CPSF1	Q10570	1443 aa	Known RBP	29.17	■■■□□ 2.26
CIRBP-234	ENST00000591659	PIK3C2A	O00443	1686 aa		29.16	■■■□□ 2.26
CIRBP-234	ENST00000591659	GC	P02774	474 aa		29.16	■■■□□ 2.26
CIRBP-234	ENST00000591659	ZNF692	Q9BU19	519 aa	Predicted RBP	29.16	■■■□□ 2.26
CIRBP-234	ENST00000591659	SPATA31A5	Q5VU36	1347 aa		29.16	■■■□□ 2.26
CIRBP-234	ENST00000591659	SPATA31A7	Q8IWB4	1347 aa		29.16	■■■□□ 2.26
CIRBP-234	ENST00000591659	AKAP12	Q02952	1782 aa		29.16	■■■□□ 2.26
CIRBP-234	ENST00000591659	BRWD3	Q6RI45	1802 aa		29.15	■■■□□ 2.26
CIRBP-234	ENST00000591659	NLRP6	P59044	892 aa		29.15	■■■□□ 2.26
CIRBP-234	ENST00000591659	FAM98C	Q17RN3	349 aa	Known RBP	29.15	■■■□□ 2.26
CIRBP-234	ENST00000591659	PCGF6	Q9BYE7	350 aa		29.15	■■■□□ 2.26
CIRBP-234	ENST00000591659	SLIT3	O75094	1523 aa		29.15	■■■□□ 2.26
CIRBP-234	ENST00000591659	TTC21B	Q7Z4L5	1316 aa		29.14	■■■□□ 2.25
CIRBP-234	ENST00000591659	LMO7	Q8WWI1	1683 aa		29.12	■■■□□ 2.25
CIRBP-234	ENST00000591659	STRN4	Q9NRL3	753 aa		29.12	■■■□□ 2.25
CIRBP-234	ENST00000591659	KTN1	Q86UP2	1357 aa	Known RBP	29.12	■■■□□ 2.25
CIRBP-234	ENST00000591659	CAMTA1	Q9Y6Y1	1673 aa		29.12	■■■□□ 2.25
CIRBP-234	ENST00000591659		A0A0G2JS52	829 aa		29.11	■■■□□ 2.25
CIRBP-234	ENST00000591659	MYT1	Q01538	1121 aa		29.11	■■■□□ 2.25
CIRBP-234	ENST00000591659	ST20-MTHFS	A0A0A6YYL1	179 aa		29.1	■■■□□ 2.25
CIRBP-234	ENST00000591659	TESK2	Q96S53	571 aa		29.1	■■■□□ 2.25
CIRBP-234	ENST00000591659	CLSPN	Q9HAW4	1339 aa		29.1	■■■□□ 2.25
CIRBP-234	ENST00000591659	CD163L1	Q9NR16	1453 aa		29.1	■■■□□ 2.25
CIRBP-234	ENST00000591659	KRT27	Q7Z3Y8	459 aa		29.09	■■■□□ 2.25
CIRBP-234	ENST00000591659	SPATA31A1	Q5TZJ5	1347 aa		29.09	■■■□□ 2.25
CIRBP-234	ENST00000591659	TTC21A	Q8NDW8	1320 aa		29.09	■■■□□ 2.25
CIRBP-234	ENST00000591659	MON2	Q7Z3U7	1717 aa		29.08	■■■□□ 2.25
CIRBP-234	ENST00000591659	EP400	Q96L91	3159 aa		29.07	■■■□□ 2.24
CIRBP-234	ENST00000591659	THSD7A	Q9UPZ6	1657 aa		29.06	■■■□□ 2.24
CIRBP-234	ENST00000591659	TMC1	Q8TDI8	760 aa		29.06	■■■□□ 2.24
CIRBP-234	ENST00000591659	EVA1C	P58658	441 aa		29.05	■■■□□ 2.24
CIRBP-234	ENST00000591659	CCDC125	Q86Z20	511 aa		29.05	■■■□□ 2.24
CIRBP-234	ENST00000591659	PUS7	Q96PZ0	661 aa	Known RBP	29.05	■■■□□ 2.24
CIRBP-234	ENST00000591659	SLC12A5	Q9H2X9	1139 aa		29.05	■■■□□ 2.24
CIRBP-234	ENST00000591659	TIMELESS	Q9UNS1	1208 aa		29.04	■■■□□ 2.24
CIRBP-234	ENST00000591659	ZBTB7C	A1YPR0	619 aa		29.03	■■■□□ 2.24
CIRBP-234	ENST00000591659	LARP1	Q6PKG0	1096 aa	Known RBP	29.03	■■■□□ 2.24
CIRBP-234	ENST00000591659	COL5A2	P05997	1499 aa	Predicted RBP	29.03	■■■□□ 2.24
CIRBP-234	ENST00000591659	BLM	P54132	1417 aa	Predicted RBP	29.03	■■■□□ 2.24
CIRBP-234	ENST00000591659	USP47	Q96K76	1375 aa		29.02	■■■□□ 2.24
CIRBP-234	ENST00000591659	AATK	Q6ZMQ8	1374 aa		29.01	■■■□□ 2.24
CIRBP-234	ENST00000591659	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	29	■■■□□ 2.23
CIRBP-234	ENST00000591659	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	29	■■■□□ 2.23
CIRBP-234	ENST00000591659	USP35	Q9P2H5	1018 aa		29	■■■□□ 2.23
CIRBP-234	ENST00000591659		A0A1W2PP64	1363 aa		29	■■■□□ 2.23
CIRBP-234	ENST00000591659	KCNH5	Q8NCM2	988 aa		28.99	■■■□□ 2.23
CIRBP-234	ENST00000591659	ZRANB1	Q9UGI0	708 aa		28.98	■■■□□ 2.23
CIRBP-234	ENST00000591659	SOX12	O15370	315 aa		28.97	■■■□□ 2.23
CIRBP-234	ENST00000591659	SLC24A1	O60721	1099 aa		28.97	■■■□□ 2.23
CIRBP-234	ENST00000591659	TERF2IP	Q9NYB0	399 aa		28.97	■■■□□ 2.23
CIRBP-234	ENST00000591659	USP31	Q70CQ4	1352 aa		28.97	■■■□□ 2.23
CIRBP-234	ENST00000591659	EDC4	Q6P2E9	1401 aa	Known RBP	28.96	■■■□□ 2.23
CIRBP-234	ENST00000591659	COL18A1	P39060	1754 aa		28.96	■■■□□ 2.23
CIRBP-234	ENST00000591659	NFAT5	O94916	1531 aa		28.96	■■■□□ 2.23
CIRBP-234	ENST00000591659	BARGIN	Q6ZT62	677 aa		28.96	■■■□□ 2.23
CIRBP-234	ENST00000591659	ARHGEF25	Q86VW2	580 aa		28.96	■■■□□ 2.23
CIRBP-234	ENST00000591659	NME9	Q86XW9	330 aa		28.96	■■■□□ 2.23
CIRBP-234	ENST00000591659	FAM182B	Q5T319	152 aa		28.95	■■■□□ 2.22
CIRBP-234	ENST00000591659	NINL	Q9Y2I6	1382 aa		28.95	■■■□□ 2.22
CIRBP-234	ENST00000591659	USP54	Q70EL1	1684 aa		28.94	■■■□□ 2.22
CIRBP-234	ENST00000591659	TCP11L2	Q8N4U5	519 aa		28.94	■■■□□ 2.22
CIRBP-234	ENST00000591659	CRB1	P82279	1406 aa		28.94	■■■□□ 2.22

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