RNA–Protein interactions for RNA: ENST00000591474.5

CXXC1-216, Transcript of CXXC finger protein 1, human

TSL 3

Gene CXXC1, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CXXC1-216	ENST00000591474	ITSN1	Q15811	1721 aa		32.99	■■■□□ 2.87
CXXC1-216	ENST00000591474	SF3B2	Q13435	895 aa	Known RBP	32.99	■■■□□ 2.87
CXXC1-216	ENST00000591474	DEFB132	Q7Z7B7	95 aa		32.98	■■■□□ 2.87
CXXC1-216	ENST00000591474	BTG4	Q9NY30	223 aa		32.98	■■■□□ 2.87
CXXC1-216	ENST00000591474	NGDN	Q8NEJ9	315 aa	Known RBP	32.97	■■■□□ 2.87
CXXC1-216	ENST00000591474	ATP7B	P35670	1465 aa		32.97	■■■□□ 2.87
CXXC1-216	ENST00000591474	FAM98C	Q17RN3	349 aa	Known RBP	32.92	■■■□□ 2.86
CXXC1-216	ENST00000591474		A0A0G2JS52	829 aa		32.9	■■■□□ 2.86
CXXC1-216	ENST00000591474	PAK3	O75914	559 aa	Predicted RBP	32.9	■■■□□ 2.86
CXXC1-216	ENST00000591474	MYT1	Q01538	1121 aa		32.9	■■■□□ 2.86
CXXC1-216	ENST00000591474	NUDT16	Q96DE0	195 aa	Known RBP	32.89	■■■□□ 2.86
CXXC1-216	ENST00000591474	SPATA31A5	Q5VU36	1347 aa		32.88	■■■□□ 2.85
CXXC1-216	ENST00000591474	SPATA31A7	Q8IWB4	1347 aa		32.88	■■■□□ 2.85
CXXC1-216	ENST00000591474	KIAA1210	Q9ULL0	1709 aa		32.88	■■■□□ 2.85
CXXC1-216	ENST00000591474	TOPAZ1	Q8N9V7	1692 aa		32.87	■■■□□ 2.85
CXXC1-216	ENST00000591474	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.87	■■■□□ 2.85
CXXC1-216	ENST00000591474	THSD7A	Q9UPZ6	1657 aa		32.86	■■■□□ 2.85
CXXC1-216	ENST00000591474	PRDM11	Q9NQV5	511 aa		32.85	■■■□□ 2.85
CXXC1-216	ENST00000591474	BAG6	P46379	1132 aa		32.83	■■■□□ 2.85
CXXC1-216	ENST00000591474	POLR3A	O14802	1390 aa	Predicted RBP	32.83	■■■□□ 2.85
CXXC1-216	ENST00000591474	CDK19	Q9BWU1	502 aa		32.82	■■■□□ 2.84
CXXC1-216	ENST00000591474	RGPD1	P0DJD0	1748 aa		32.82	■■■□□ 2.84
CXXC1-216	ENST00000591474	KIAA0232	Q92628	1395 aa		32.81	■■■□□ 2.84
CXXC1-216	ENST00000591474	LRP5	O75197	1615 aa		32.78	■■■□□ 2.84
CXXC1-216	ENST00000591474	CCDC61	Q9Y6R9	512 aa		32.77	■■■□□ 2.84
CXXC1-216	ENST00000591474	ACE	P12821	1306 aa		32.76	■■■□□ 2.83
CXXC1-216	ENST00000591474	SPATA31A1	Q5TZJ5	1347 aa		32.76	■■■□□ 2.83
CXXC1-216	ENST00000591474	PLEKHG3	A1L390	1219 aa		32.75	■■■□□ 2.83
CXXC1-216	ENST00000591474	NBPF8	Q3BBV2	869 aa		32.74	■■■□□ 2.83
CXXC1-216	ENST00000591474	CHRNA2	Q15822	529 aa		32.73	■■■□□ 2.83
CXXC1-216	ENST00000591474	DISP2	A7MBM2	1401 aa		32.73	■■■□□ 2.83
CXXC1-216	ENST00000591474	TNS1	Q9HBL0	1735 aa	Known RBP	32.73	■■■□□ 2.83
CXXC1-216	ENST00000591474	NRK	Q7Z2Y5	1582 aa		32.72	■■■□□ 2.83
CXXC1-216	ENST00000591474	FAM182B	Q5T319	152 aa		32.72	■■■□□ 2.83
CXXC1-216	ENST00000591474	ZC3H6	P61129	1189 aa	Known RBP	32.71	■■■□□ 2.83
CXXC1-216	ENST00000591474	NUTM2G	Q5VZR2	741 aa		32.7	■■■□□ 2.83
CXXC1-216	ENST00000591474	NBPF1	Q3BBV0	1214 aa		32.69	■■■□□ 2.82
CXXC1-216	ENST00000591474	STRN4	Q9NRL3	753 aa		32.69	■■■□□ 2.82
CXXC1-216	ENST00000591474	EN1	Q05925	392 aa	Predicted RBP	32.68	■■■□□ 2.82
CXXC1-216	ENST00000591474	USP19	O94966	1318 aa		32.66	■■■□□ 2.82
CXXC1-216	ENST00000591474	SSH2	Q76I76	1423 aa		32.66	■■■□□ 2.82
CXXC1-216	ENST00000591474	LMO7	Q8WWI1	1683 aa		32.66	■■■□□ 2.82
CXXC1-216	ENST00000591474	PSD	A5PKW4	1024 aa	Predicted RBP	32.65	■■■□□ 2.82
CXXC1-216	ENST00000591474	ABTB2	Q8N961	1025 aa		32.65	■■■□□ 2.82
CXXC1-216	ENST00000591474	CPD	O75976	1380 aa		32.65	■■■□□ 2.82
CXXC1-216	ENST00000591474	CAMTA1	Q9Y6Y1	1673 aa		32.63	■■■□□ 2.81
CXXC1-216	ENST00000591474	PPIP5K1	Q6PFW1	1433 aa		32.63	■■■□□ 2.81
CXXC1-216	ENST00000591474	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.63	■■■□□ 2.81
CXXC1-216	ENST00000591474	FAM196A	Q6ZSG2	479 aa		32.62	■■■□□ 2.81
CXXC1-216	ENST00000591474	BARGIN	Q6ZT62	677 aa		32.62	■■■□□ 2.81
CXXC1-216	ENST00000591474	QRICH2	Q9H0J4	1663 aa		32.6	■■■□□ 2.81
CXXC1-216	ENST00000591474	EVA1C	P58658	441 aa		32.6	■■■□□ 2.81
CXXC1-216	ENST00000591474	SRPK2	P78362	688 aa	Known RBP	32.6	■■■□□ 2.81
CXXC1-216	ENST00000591474	BRD4	O60885	1362 aa	Predicted RBP	32.59	■■■□□ 2.81
CXXC1-216	ENST00000591474	USP35	Q9P2H5	1018 aa		32.58	■■■□□ 2.81
CXXC1-216	ENST00000591474	NLRP13	Q86W25	1043 aa		32.57	■■■□□ 2.8
CXXC1-216	ENST00000591474	TRIM37	O94972	964 aa		32.56	■■■□□ 2.8
CXXC1-216	ENST00000591474	EZH2	Q15910	746 aa	Known RBP	32.56	■■■□□ 2.8
CXXC1-216	ENST00000591474	LARP1	Q6PKG0	1096 aa	Known RBP	32.56	■■■□□ 2.8
CXXC1-216	ENST00000591474	CABP2	Q9NPB3	220 aa		32.56	■■■□□ 2.8
CXXC1-216	ENST00000591474	GC	P02774	474 aa		32.55	■■■□□ 2.8
CXXC1-216	ENST00000591474	CAMKK2	Q96RR4	588 aa		32.55	■■■□□ 2.8
CXXC1-216	ENST00000591474	TCP11L2	Q8N4U5	519 aa		32.54	■■■□□ 2.8
CXXC1-216	ENST00000591474	THRAP3	Q9Y2W1	955 aa	Known RBP	32.53	■■■□□ 2.8
CXXC1-216	ENST00000591474	PARD3	Q8TEW0	1356 aa		32.53	■■■□□ 2.8
CXXC1-216	ENST00000591474	PDE3B	Q13370	1112 aa		32.52	■■■□□ 2.8
CXXC1-216	ENST00000591474	R3HDM1	Q15032	1099 aa	Known RBP	32.52	■■■□□ 2.8
CXXC1-216	ENST00000591474	COL5A2	P05997	1499 aa	Predicted RBP	32.52	■■■□□ 2.8
CXXC1-216	ENST00000591474	USP6	P35125	1406 aa		32.51	■■■□□ 2.8
CXXC1-216	ENST00000591474	PARP4	Q9UKK3	1724 aa	Known RBP	32.49	■■■□□ 2.79
CXXC1-216	ENST00000591474	SLIT3	O75094	1523 aa		32.49	■■■□□ 2.79
CXXC1-216	ENST00000591474	RREB1	Q92766	1687 aa		32.49	■■■□□ 2.79
CXXC1-216	ENST00000591474	APBA3	O96018	575 aa		32.48	■■■□□ 2.79
CXXC1-216	ENST00000591474	CABP1	Q9NZU7	370 aa		32.47	■■■□□ 2.79
CXXC1-216	ENST00000591474	L3MBTL2	Q969R5	705 aa		32.46	■■■□□ 2.79
CXXC1-216	ENST00000591474	TRPM1	Q7Z4N2	1603 aa		32.46	■■■□□ 2.79
CXXC1-216	ENST00000591474	CRB1	P82279	1406 aa		32.44	■■■□□ 2.78
CXXC1-216	ENST00000591474	PIK3C2A	O00443	1686 aa		32.43	■■■□□ 2.78
CXXC1-216	ENST00000591474	AATK	Q6ZMQ8	1374 aa		32.43	■■■□□ 2.78
CXXC1-216	ENST00000591474	NUP188	Q5SRE5	1749 aa		32.43	■■■□□ 2.78
CXXC1-216	ENST00000591474	NLRP6	P59044	892 aa		32.42	■■■□□ 2.78
CXXC1-216	ENST00000591474	EVC2	Q86UK5	1308 aa		32.42	■■■□□ 2.78
CXXC1-216	ENST00000591474	C11orf95	C9JLR9	678 aa	Predicted RBP	32.39	■■■□□ 2.78
CXXC1-216	ENST00000591474	COL18A1	P39060	1754 aa		32.39	■■■□□ 2.78
CXXC1-216	ENST00000591474	PEAK1	Q9H792	1746 aa		32.37	■■■□□ 2.77
CXXC1-216	ENST00000591474	LRRC37A3	O60309	1634 aa		32.36	■■■□□ 2.77
CXXC1-216	ENST00000591474	AKAP12	Q02952	1782 aa		32.35	■■■□□ 2.77
CXXC1-216	ENST00000591474	ZBTB7C	A1YPR0	619 aa		32.35	■■■□□ 2.77
CXXC1-216	ENST00000591474	OVOS2	A0A0G2JMS6	1433 aa		32.34	■■■□□ 2.77
CXXC1-216	ENST00000591474	OVOS2	A0A0J9YW53	1432 aa		32.34	■■■□□ 2.77
CXXC1-216	ENST00000591474	OVOS2	Q6IE36	1432 aa		32.34	■■■□□ 2.77
CXXC1-216	ENST00000591474	ROCK2	O75116	1388 aa	Known RBP	32.33	■■■□□ 2.77
CXXC1-216	ENST00000591474	WNK3	Q9BYP7	1800 aa		32.33	■■■□□ 2.77
CXXC1-216	ENST00000591474	ZNF692	Q9BU19	519 aa	Predicted RBP	32.32	■■■□□ 2.76
CXXC1-216	ENST00000591474	CPSF1	Q10570	1443 aa	Known RBP	32.32	■■■□□ 2.76
CXXC1-216	ENST00000591474	NBPF14	Q5TI25	921 aa		32.31	■■■□□ 2.76
CXXC1-216	ENST00000591474	SIN3A	Q96ST3	1273 aa		32.31	■■■□□ 2.76
CXXC1-216	ENST00000591474	TTC21B	Q7Z4L5	1316 aa		32.3	■■■□□ 2.76
CXXC1-216	ENST00000591474	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.3	■■■□□ 2.76
CXXC1-216	ENST00000591474	RGPD4	Q7Z3J3	1758 aa		32.3	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms