RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 EN1Q05925 392 aaPredicted RBP23.52■■□□□ 1.36
DDX39A-216ENST00000591275 HRCP23327 699 aa23.51■■□□□ 1.35
DDX39A-216ENST00000591275 PAK3O75914 559 aaPredicted RBP23.5■■□□□ 1.35
DDX39A-216ENST00000591275 SPATA31A5Q5VU36 1347 aa23.5■■□□□ 1.35
DDX39A-216ENST00000591275 SPATA31A7Q8IWB4 1347 aa23.5■■□□□ 1.35
DDX39A-216ENST00000591275 TULP4Q9NRJ4 1543 aa23.49■■□□□ 1.35
DDX39A-216ENST00000591275 NGDNQ8NEJ9 315 aaKnown RBP23.49■■□□□ 1.35
DDX39A-216ENST00000591275 KDM2AQ9Y2K7 1162 aa23.49■■□□□ 1.35
DDX39A-216ENST00000591275 EIF3AQ14152 1382 aaKnown RBP23.49■■□□□ 1.35
DDX39A-216ENST00000591275 RGPD1P0DJD0 1748 aa23.48■■□□□ 1.35
DDX39A-216ENST00000591275 WASLO00401 505 aaPredicted RBP23.48■■□□□ 1.35
DDX39A-216ENST00000591275 PRDM11Q9NQV5 511 aa23.48■■□□□ 1.35
DDX39A-216ENST00000591275 CRYBG1Q9Y4K1 1723 aa23.47■■□□□ 1.35
DDX39A-216ENST00000591275 THSD7AQ9UPZ6 1657 aa23.45■■□□□ 1.34
DDX39A-216ENST00000591275 R3HDM1Q15032 1099 aaKnown RBP23.45■■□□□ 1.34
DDX39A-216ENST00000591275 DCAF11Q8TEB1 546 aa23.45■■□□□ 1.34
DDX39A-216ENST00000591275 RAB3GAP2Q9H2M9 1393 aa23.43■■□□□ 1.34
DDX39A-216ENST00000591275 TNS1Q9HBL0 1735 aaKnown RBP23.42■■□□□ 1.34
DDX39A-216ENST00000591275 CHRNA2Q15822 529 aa23.42■■□□□ 1.34
DDX39A-216ENST00000591275 KIAA0232Q92628 1395 aa23.41■■□□□ 1.34
DDX39A-216ENST00000591275 EZH2Q15910 746 aaKnown RBP23.41■■□□□ 1.34
DDX39A-216ENST00000591275 SPATA31A1Q5TZJ5 1347 aa23.4■■□□□ 1.34
DDX39A-216ENST00000591275 STRN4Q9NRL3 753 aa23.4■■□□□ 1.34
DDX39A-216ENST00000591275 NUTM2GQ5VZR2 741 aa23.39■■□□□ 1.33
DDX39A-216ENST00000591275 DISP2A7MBM2 1401 aa23.39■■□□□ 1.33
DDX39A-216ENST00000591275 ATP7BP35670 1465 aa23.38■■□□□ 1.33
DDX39A-216ENST00000591275 TRIM37O94972 964 aa23.38■■□□□ 1.33
DDX39A-216ENST00000591275 ZC3H6P61129 1189 aaKnown RBP23.38■■□□□ 1.33
DDX39A-216ENST00000591275 NUDT16Q96DE0 195 aaKnown RBP23.38■■□□□ 1.33
DDX39A-216ENST00000591275 ITSN1Q15811 1721 aa23.38■■□□□ 1.33
DDX39A-216ENST00000591275 PHRF1Q9P1Y6 1649 aaKnown RBP23.37■■□□□ 1.33
DDX39A-216ENST00000591275 ARHGEF28Q8N1W1 1705 aaKnown RBP23.36■■□□□ 1.33
DDX39A-216ENST00000591275 USP35Q9P2H5 1018 aa23.36■■□□□ 1.33
DDX39A-216ENST00000591275 FAM196AQ6ZSG2 479 aa23.35■■□□□ 1.33
DDX39A-216ENST00000591275 CAMKK2Q96RR4 588 aa23.35■■□□□ 1.33
DDX39A-216ENST00000591275 APBA3O96018 575 aa23.33■■□□□ 1.33
DDX39A-216ENST00000591275 CDK19Q9BWU1 502 aa23.32■■□□□ 1.32
DDX39A-216ENST00000591275 EVA1CP58658 441 aa23.31■■□□□ 1.32
DDX39A-216ENST00000591275 ACEP12821 1306 aa23.3■■□□□ 1.32
DDX39A-216ENST00000591275 SSH2Q76I76 1423 aa23.29■■□□□ 1.32
DDX39A-216ENST00000591275 STAC3Q96MF2 364 aa23.29■■□□□ 1.32
DDX39A-216ENST00000591275 PDE3BQ13370 1112 aa23.28■■□□□ 1.32
DDX39A-216ENST00000591275 NBPF8Q3BBV2 869 aa23.28■■□□□ 1.32
DDX39A-216ENST00000591275 POLR3AO14802 1390 aaPredicted RBP23.27■■□□□ 1.32
DDX39A-216ENST00000591275 LARP1Q6PKG0 1096 aaKnown RBP23.27■■□□□ 1.32
DDX39A-216ENST00000591275 TOPAZ1Q8N9V7 1692 aa23.27■■□□□ 1.32
DDX39A-216ENST00000591275 CAMTA1Q9Y6Y1 1673 aa23.26■■□□□ 1.31
DDX39A-216ENST00000591275 BARGINQ6ZT62 677 aa23.26■■□□□ 1.31
DDX39A-216ENST00000591275 ABTB2Q8N961 1025 aa23.26■■□□□ 1.31
DDX39A-216ENST00000591275 NRKQ7Z2Y5 1582 aa23.26■■□□□ 1.31
DDX39A-216ENST00000591275 PARD3Q8TEW0 1356 aa23.26■■□□□ 1.31
DDX39A-216ENST00000591275 CCDC61Q9Y6R9 512 aa23.25■■□□□ 1.31
DDX39A-216ENST00000591275 RREB1Q92766 1687 aa23.24■■□□□ 1.31
DDX39A-216ENST00000591275 NUP188Q5SRE5 1749 aa23.23■■□□□ 1.31
DDX39A-216ENST00000591275 TCP11L2Q8N4U5 519 aa23.23■■□□□ 1.31
DDX39A-216ENST00000591275 PLEKHG3A1L390 1219 aa23.22■■□□□ 1.31
DDX39A-216ENST00000591275 LMO7Q8WWI1 1683 aa23.22■■□□□ 1.31
DDX39A-216ENST00000591275 CPDO75976 1380 aa23.2■■□□□ 1.3
DDX39A-216ENST00000591275 USP19O94966 1318 aa23.2■■□□□ 1.3
DDX39A-216ENST00000591275 NBPF14Q5TI25 921 aa23.19■■□□□ 1.3
DDX39A-216ENST00000591275 ZBTB7CA1YPR0 619 aa23.17■■□□□ 1.3
DDX39A-216ENST00000591275 GCP02774 474 aa23.17■■□□□ 1.3
DDX39A-216ENST00000591275 NBPF1Q3BBV0 1214 aa23.17■■□□□ 1.3
DDX39A-216ENST00000591275 NLRP13Q86W25 1043 aa23.17■■□□□ 1.3
DDX39A-216ENST00000591275 SRPK2P78362 688 aaKnown RBP23.16■■□□□ 1.3
DDX39A-216ENST00000591275 PPIP5K1Q6PFW1 1433 aa23.16■■□□□ 1.3
DDX39A-216ENST00000591275 THRAP3Q9Y2W1 955 aaKnown RBP23.15■■□□□ 1.3
DDX39A-216ENST00000591275 COL5A2P05997 1499 aaPredicted RBP23.15■■□□□ 1.3
DDX39A-216ENST00000591275 PARP4Q9UKK3 1724 aaKnown RBP23.14■■□□□ 1.3
DDX39A-216ENST00000591275 KIAA1210Q9ULL0 1709 aa23.14■■□□□ 1.3
DDX39A-216ENST00000591275 CABP2Q9NPB3 220 aa23.14■■□□□ 1.29
DDX39A-216ENST00000591275 PPP1R1BQ9UD71 204 aaPredicted RBP23.12■■□□□ 1.29
DDX39A-216ENST00000591275 CRB1P82279 1406 aa23.11■■□□□ 1.29
DDX39A-216ENST00000591275 YY1P25490 414 aa23.11■■□□□ 1.29
DDX39A-216ENST00000591275 SPON1Q9HCB6 807 aa23.11■■□□□ 1.29
DDX39A-216ENST00000591275 CENPJQ9HC77 1338 aaPredicted RBP23.09■■□□□ 1.29
DDX39A-216ENST00000591275 OVOS2A0A0G2JMS6 1433 aa23.09■■□□□ 1.29
DDX39A-216ENST00000591275 OVOS2A0A0J9YW53 1432 aa23.09■■□□□ 1.29
DDX39A-216ENST00000591275 OVOS2Q6IE36 1432 aa23.09■■□□□ 1.29
DDX39A-216ENST00000591275 KCNQ2O43526 872 aa23.08■■□□□ 1.29
DDX39A-216ENST00000591275 NLRP6P59044 892 aa23.08■■□□□ 1.29
DDX39A-216ENST00000591275 PEAK1Q9H792 1746 aa23.08■■□□□ 1.28
DDX39A-216ENST00000591275 CABP1Q9NZU7 370 aa23.07■■□□□ 1.28
DDX39A-216ENST00000591275 LRRC37A3O60309 1634 aa23.07■■□□□ 1.28
DDX39A-216ENST00000591275 TOM1L2Q6ZVM7 507 aa23.06■■□□□ 1.28
DDX39A-216ENST00000591275 PTF1AQ7RTS3 328 aa23.06■■□□□ 1.28
DDX39A-216ENST00000591275 USP6P35125 1406 aa23.06■■□□□ 1.28
DDX39A-216ENST00000591275 QRICH2Q9H0J4 1663 aa23.06■■□□□ 1.28
DDX39A-216ENST00000591275 SBF2Q86WG5 1849 aa23.05■■□□□ 1.28
DDX39A-216ENST00000591275 AATKQ6ZMQ8 1374 aa23.05■■□□□ 1.28
DDX39A-216ENST00000591275 C11orf95C9JLR9 678 aaPredicted RBP23.05■■□□□ 1.28
DDX39A-216ENST00000591275 DDB1Q16531 1140 aa23.05■■□□□ 1.28
DDX39A-216ENST00000591275 BRD4O60885 1362 aaPredicted RBP23.04■■□□□ 1.28
DDX39A-216ENST00000591275 SLIT3O75094 1523 aa23.04■■□□□ 1.28
DDX39A-216ENST00000591275 ANO8Q9HCE9 1232 aaPredicted RBP23.04■■□□□ 1.28
DDX39A-216ENST00000591275 PLSCR1O15162 318 aa23.02■■□□□ 1.28
DDX39A-216ENST00000591275 RGPD3A6NKT7 1758 aaPredicted RBP23.01■■□□□ 1.27
DDX39A-216ENST00000591275 RGPD4Q7Z3J3 1758 aa23.01■■□□□ 1.27
DDX39A-216ENST00000591275 PIK3C2AO00443 1686 aa23.01■■□□□ 1.27
DDX39A-216ENST00000591275 AXIN2Q9Y2T1 843 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms