RNA–Protein interactions for RNA: ENST00000590523.1

LINC00662-206, long intergenic non-protein coding RNA 662, humanhuman

TSL 1 (best) BASIC

Gene LINC00662, Length 2,053 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-206ENST00000590523 PNNQ9H307 717 aaKnown RBP16.23■□□□□ 0.19
LINC00662-206ENST00000590523 PCDHB15Q9Y5E8 787 aa16.23■□□□□ 0.19
LINC00662-206ENST00000590523 NLRP1Q9C000 1473 aa16.23■□□□□ 0.19
LINC00662-206ENST00000590523 RLBP1P12271 317 aa16.22■□□□□ 0.19
LINC00662-206ENST00000590523 DZIP1LQ8IYY4 767 aaKnown RBP16.22■□□□□ 0.19
LINC00662-206ENST00000590523 TERF2IPQ9NYB0 399 aa16.22■□□□□ 0.19
LINC00662-206ENST00000590523 PDZRN3Q9UPQ7 1066 aa16.22■□□□□ 0.19
LINC00662-206ENST00000590523 FTSJ3Q8IY81 847 aaKnown RBP16.21■□□□□ 0.19
LINC00662-206ENST00000590523 COL3A1P02461 1466 aaPredicted RBP16.21■□□□□ 0.18
LINC00662-206ENST00000590523 A0A1W2PP64 1363 aa16.2■□□□□ 0.18
LINC00662-206ENST00000590523 TBC1D32Q96NH3 1257 aa16.2■□□□□ 0.18
LINC00662-206ENST00000590523 CABP2Q9NPB3 220 aa16.2■□□□□ 0.18
LINC00662-206ENST00000590523 GLIPR1L2Q4G1C9 344 aa16.19■□□□□ 0.18
LINC00662-206ENST00000590523 FRAT2O75474 233 aaPredicted RBP16.18■□□□□ 0.18
LINC00662-206ENST00000590523 PLEKHF1Q96S99 279 aa16.18■□□□□ 0.18
LINC00662-206ENST00000590523 DDX19BQ9UMR2 479 aa16.18■□□□□ 0.18
LINC00662-206ENST00000590523 RICTORQ6R327 1708 aa16.18■□□□□ 0.18
LINC00662-206ENST00000590523 TMPOP42166 694 aaKnown RBP16.18■□□□□ 0.18
LINC00662-206ENST00000590523 HDAC1Q13547 482 aaPredicted RBP16.18■□□□□ 0.18
LINC00662-206ENST00000590523 PTPRMP28827 1452 aa16.18■□□□□ 0.18
LINC00662-206ENST00000590523 TMEM131LA2VDJ0 1609 aa16.17■□□□□ 0.18
LINC00662-206ENST00000590523 SEC24BO95487 1268 aa16.17■□□□□ 0.18
LINC00662-206ENST00000590523 SRPK2P78362 688 aaKnown RBP16.17■□□□□ 0.18
LINC00662-206ENST00000590523 L1TD1Q5T7N2 865 aaKnown RBP16.17■□□□□ 0.18
LINC00662-206ENST00000590523 BCL2L13Q9BXK5 485 aa16.17■□□□□ 0.18
LINC00662-206ENST00000590523 PREX1Q8TCU6 1659 aa16.17■□□□□ 0.18
LINC00662-206ENST00000590523 IDI1Q13907 227 aa16.17■□□□□ 0.18
LINC00662-206ENST00000590523 PIAS4Q8N2W9 510 aaPredicted RBP16.17■□□□□ 0.18
LINC00662-206ENST00000590523 SMC4Q9NTJ3 1288 aa16.17■□□□□ 0.18
LINC00662-206ENST00000590523 MYO5BQ9ULV0 1848 aa16.15■□□□□ 0.18
LINC00662-206ENST00000590523 KIF16BQ96L93 1317 aa16.15■□□□□ 0.18
LINC00662-206ENST00000590523 YEATS2Q9ULM3 1422 aa16.15■□□□□ 0.18
LINC00662-206ENST00000590523 CDC42BPGQ6DT37 1551 aa16.15■□□□□ 0.18
LINC00662-206ENST00000590523 KIF20BQ96Q89 1820 aa16.15■□□□□ 0.18
LINC00662-206ENST00000590523 IPO8O15397 1037 aaKnown RBP16.15■□□□□ 0.18
LINC00662-206ENST00000590523 HDGFL2Q7Z4V5 671 aaPredicted RBP16.15■□□□□ 0.18
LINC00662-206ENST00000590523 TNNQ9UQP3 1299 aa16.15■□□□□ 0.18
LINC00662-206ENST00000590523 U2SURPO15042 1029 aaKnown RBP16.14■□□□□ 0.17
LINC00662-206ENST00000590523 ATF7IPQ6VMQ6 1270 aa16.14■□□□□ 0.17
LINC00662-206ENST00000590523 ZNF428Q96B54 188 aa16.14■□□□□ 0.17
LINC00662-206ENST00000590523 TRIM35Q9UPQ4 493 aa16.14■□□□□ 0.17
LINC00662-206ENST00000590523 PNPLA6Q8IY17 1366 aa16.14■□□□□ 0.17
LINC00662-206ENST00000590523 YTHDC2Q9H6S0 1430 aaKnown RBP16.14■□□□□ 0.17
LINC00662-206ENST00000590523 EXOSC9Q06265 439 aaKnown RBP16.14■□□□□ 0.17
LINC00662-206ENST00000590523 ALDH1L2Q3SY69 923 aa16.13■□□□□ 0.17
LINC00662-206ENST00000590523 CD163L1Q9NR16 1453 aa16.13■□□□□ 0.17
LINC00662-206ENST00000590523 FYB1O15117 783 aa16.12■□□□□ 0.17
LINC00662-206ENST00000590523 DIAPH1O60610 1272 aaKnown RBP16.12■□□□□ 0.17
LINC00662-206ENST00000590523 TRIM27P14373 513 aa16.12■□□□□ 0.17
LINC00662-206ENST00000590523 NUTM2DQ5VT03 806 aaPredicted RBP16.12■□□□□ 0.17
LINC00662-206ENST00000590523 SSH1Q8WYL5 1049 aa16.12■□□□□ 0.17
LINC00662-206ENST00000590523 TSR2Q969E8 191 aaKnown RBP16.12■□□□□ 0.17
LINC00662-206ENST00000590523 GGNBP2Q9H3C7 697 aa16.12■□□□□ 0.17
LINC00662-206ENST00000590523 POGKQ9P215 609 aa16.12■□□□□ 0.17
LINC00662-206ENST00000590523 CHMP4BQ9H444 224 aaKnown RBP16.11■□□□□ 0.17
LINC00662-206ENST00000590523 ANTXR1Q9H6X2 564 aa16.11■□□□□ 0.17
LINC00662-206ENST00000590523 FCHSD2O94868 740 aa16.1■□□□□ 0.17
LINC00662-206ENST00000590523 STK26Q9P289 416 aa16.1■□□□□ 0.17
LINC00662-206ENST00000590523 RIPK4P57078 832 aa16.1■□□□□ 0.17
LINC00662-206ENST00000590523 SAFB2Q14151 953 aaKnown RBP eCLIP16.1■□□□□ 0.17
LINC00662-206ENST00000590523 ITPRIPQ8IWB1 547 aa16.1■□□□□ 0.17
LINC00662-206ENST00000590523 SMC5Q8IY18 1101 aa16.1■□□□□ 0.17
LINC00662-206ENST00000590523 PRAM1Q96QH2 718 aa16.1■□□□□ 0.17
LINC00662-206ENST00000590523 ALKQ9UM73 1620 aa16.09■□□□□ 0.17
LINC00662-206ENST00000590523 BRPF1P55201 1214 aaPredicted RBP16.09■□□□□ 0.17
LINC00662-206ENST00000590523 ARHGEF40Q8TER5 1519 aa16.09■□□□□ 0.17
LINC00662-206ENST00000590523 DLC1Q96QB1 1528 aa16.09■□□□□ 0.17
LINC00662-206ENST00000590523 CALD1Q05682 793 aaKnown RBP16.09■□□□□ 0.17
LINC00662-206ENST00000590523 PPIP5K1Q6PFW1 1433 aa16.09■□□□□ 0.17
LINC00662-206ENST00000590523 TBC1D2Q9BYX2 928 aa16.09■□□□□ 0.17
LINC00662-206ENST00000590523 ATP7BP35670 1465 aa16.08■□□□□ 0.17
LINC00662-206ENST00000590523 MINK1Q8N4C8 1332 aaPredicted RBP16.08■□□□□ 0.16
LINC00662-206ENST00000590523 NOB1Q9ULX3 412 aaKnown RBP16.07■□□□□ 0.16
LINC00662-206ENST00000590523 C22orf23Q9BZE7 217 aa16.07■□□□□ 0.16
LINC00662-206ENST00000590523 SLKQ9H2G2 1235 aaPredicted RBP16.07■□□□□ 0.16
LINC00662-206ENST00000590523 ZBTB40Q9NUA8 1239 aa16.07■□□□□ 0.16
LINC00662-206ENST00000590523 PKNOX2Q96KN3 472 aa16.06■□□□□ 0.16
LINC00662-206ENST00000590523 FAM135BQ49AJ0 1406 aa16.05■□□□□ 0.16
LINC00662-206ENST00000590523 CDK19Q9BWU1 502 aa16.05■□□□□ 0.16
LINC00662-206ENST00000590523 LRRC7Q96NW7 1537 aa16.05■□□□□ 0.16
LINC00662-206ENST00000590523 TMEM57Q8N5G2 664 aa16.04■□□□□ 0.16
LINC00662-206ENST00000590523 ARHGAP45Q92619 1136 aa16.04■□□□□ 0.16
LINC00662-206ENST00000590523 NUCB1Q02818 461 aa16.03■□□□□ 0.16
LINC00662-206ENST00000590523 CHMP5Q9NZZ3 219 aa16.03■□□□□ 0.16
LINC00662-206ENST00000590523 RRAGDQ9NQL2 400 aaPredicted RBP16.02■□□□□ 0.15
LINC00662-206ENST00000590523 REREQ9P2R6 1566 aa16.02■□□□□ 0.15
LINC00662-206ENST00000590523 RRP9O43818 475 aaKnown RBP16.01■□□□□ 0.15
LINC00662-206ENST00000590523 CLCN1P35523 988 aa16.01■□□□□ 0.15
LINC00662-206ENST00000590523 CABP1Q9NZU7 370 aa16.01■□□□□ 0.15
LINC00662-206ENST00000590523 PIK3R4Q99570 1358 aa16.01■□□□□ 0.15
LINC00662-206ENST00000590523 MFAP1P55081 439 aaKnown RBP16.01■□□□□ 0.15
LINC00662-206ENST00000590523 MLECQ14165 292 aa16.01■□□□□ 0.15
LINC00662-206ENST00000590523 NFE2L2Q16236 605 aa16.01■□□□□ 0.15
LINC00662-206ENST00000590523 MAP2P11137 1827 aaKnown RBP16■□□□□ 0.15
LINC00662-206ENST00000590523 HSCBQ8IWL3 235 aa16■□□□□ 0.15
LINC00662-206ENST00000590523 GCC1Q96CN9 775 aa16■□□□□ 0.15
LINC00662-206ENST00000590523 PTCH1Q13635 1447 aa16■□□□□ 0.15
LINC00662-206ENST00000590523 GNAI1P63096 354 aa15.99■□□□□ 0.15
LINC00662-206ENST00000590523 PRKAR2BP31323 418 aa15.99■□□□□ 0.15
LINC00662-206ENST00000590523 RBM25P49756 843 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms