RNA–Protein interactions for RNA: ENST00000590436.5

TCF3-213, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-213ENST00000590436 SSH2Q76I76 1423 aa27.36■■□□□ 1.97
TCF3-213ENST00000590436 SOS2Q07890 1332 aaPredicted RBP27.36■■□□□ 1.97
TCF3-213ENST00000590436 KNSTRNQ9Y448 316 aa27.35■■□□□ 1.97
TCF3-213ENST00000590436 TTC21AQ8NDW8 1320 aa27.35■■□□□ 1.97
TCF3-213ENST00000590436 SBNO1A3KN83 1393 aa27.35■■□□□ 1.97
TCF3-213ENST00000590436 TTC21BQ7Z4L5 1316 aa27.34■■□□□ 1.97
TCF3-213ENST00000590436 PAK3O75914 559 aaPredicted RBP27.33■■□□□ 1.97
TCF3-213ENST00000590436 CGNL1Q0VF96 1302 aa27.32■■□□□ 1.96
TCF3-213ENST00000590436 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.31■■□□□ 1.96
TCF3-213ENST00000590436 KIF20BQ96Q89 1820 aa27.31■■□□□ 1.96
TCF3-213ENST00000590436 TNS3Q68CZ2 1445 aa27.31■■□□□ 1.96
TCF3-213ENST00000590436 COL16A1Q07092 1604 aaPredicted RBP27.3■■□□□ 1.96
TCF3-213ENST00000590436 PER1O15534 1290 aaPredicted RBP27.3■■□□□ 1.96
TCF3-213ENST00000590436 ALS2Q96Q42 1657 aa27.3■■□□□ 1.96
TCF3-213ENST00000590436 SPATA31A3Q5VYP0 1347 aa27.28■■□□□ 1.96
TCF3-213ENST00000590436 PIK3C2AO00443 1686 aa27.27■■□□□ 1.96
TCF3-213ENST00000590436 ARHGEF10O15013 1369 aa27.27■■□□□ 1.96
TCF3-213ENST00000590436 NSD2O96028 1365 aa27.26■■□□□ 1.95
TCF3-213ENST00000590436 FBXO41Q8TF61 875 aa27.26■■□□□ 1.95
TCF3-213ENST00000590436 LRRC59Q96AG4 307 aaKnown RBP27.26■■□□□ 1.95
TCF3-213ENST00000590436 LMOD2Q6P5Q4 547 aa27.25■■□□□ 1.95
TCF3-213ENST00000590436 ABTB2Q8N961 1025 aa27.25■■□□□ 1.95
TCF3-213ENST00000590436 NME9Q86XW9 330 aa27.24■■□□□ 1.95
TCF3-213ENST00000590436 NPC1L1Q9UHC9 1359 aa27.23■■□□□ 1.95
TCF3-213ENST00000590436 FYB1O15117 783 aa27.23■■□□□ 1.95
TCF3-213ENST00000590436 AMER1Q5JTC6 1135 aaPredicted RBP27.23■■□□□ 1.95
TCF3-213ENST00000590436 ANKRD26Q9UPS8 1709 aa27.23■■□□□ 1.95
TCF3-213ENST00000590436 USP54Q70EL1 1684 aa27.23■■□□□ 1.95
TCF3-213ENST00000590436 USP31Q70CQ4 1352 aa27.21■■□□□ 1.95
TCF3-213ENST00000590436 HSPA1LP34931 641 aa27.2■■□□□ 1.94
TCF3-213ENST00000590436 NLRP6P59044 892 aa27.2■■□□□ 1.94
TCF3-213ENST00000590436 NLRP13Q86W25 1043 aa27.2■■□□□ 1.94
TCF3-213ENST00000590436 GGNBP2Q9H3C7 697 aa27.2■■□□□ 1.94
TCF3-213ENST00000590436 OVOS2A0A0J9YW53 1432 aa27.19■■□□□ 1.94
TCF3-213ENST00000590436 OVOS2Q6IE36 1432 aa27.19■■□□□ 1.94
TCF3-213ENST00000590436 MED1Q15648 1581 aaPredicted RBP27.18■■□□□ 1.94
TCF3-213ENST00000590436 COG3Q96JB2 828 aa27.18■■□□□ 1.94
TCF3-213ENST00000590436 MARF1Q9Y4F3 1742 aaKnown RBP27.17■■□□□ 1.94
TCF3-213ENST00000590436 NUTM2GQ5VZR2 741 aa27.17■■□□□ 1.94
TCF3-213ENST00000590436 PNPLA6Q8IY17 1366 aa27.17■■□□□ 1.94
TCF3-213ENST00000590436 COL22A1Q8NFW1 1626 aaPredicted RBP27.16■■□□□ 1.94
TCF3-213ENST00000590436 CC2D1BQ5T0F9 858 aaKnown RBP27.16■■□□□ 1.94
TCF3-213ENST00000590436 ZRANB1Q9UGI0 708 aa27.16■■□□□ 1.94
TCF3-213ENST00000590436 SHPRHQ149N8 1683 aa27.16■■□□□ 1.94
TCF3-213ENST00000590436 JCADQ9P266 1359 aa27.14■■□□□ 1.94
TCF3-213ENST00000590436 USP19O94966 1318 aa27.14■■□□□ 1.93
TCF3-213ENST00000590436 MORC1Q86VD1 984 aa27.13■■□□□ 1.93
TCF3-213ENST00000590436 CRYBG1Q9Y4K1 1723 aa27.13■■□□□ 1.93
TCF3-213ENST00000590436 SLIT3O75094 1523 aa27.12■■□□□ 1.93
TCF3-213ENST00000590436 CNGB1Q14028 1251 aaPredicted RBP27.12■■□□□ 1.93
TCF3-213ENST00000590436 PHRF1Q9P1Y6 1649 aaKnown RBP27.12■■□□□ 1.93
TCF3-213ENST00000590436 ABCA3Q99758 1704 aa27.1■■□□□ 1.93
TCF3-213ENST00000590436 DIEXFQ68CQ4 756 aaKnown RBP27.09■■□□□ 1.93
TCF3-213ENST00000590436 PLEKHG5O94827 1062 aa27.08■■□□□ 1.93
TCF3-213ENST00000590436 KCNH5Q8NCM2 988 aa27.08■■□□□ 1.93
TCF3-213ENST00000590436 PARD3Q8TEW0 1356 aa27.07■■□□□ 1.92
TCF3-213ENST00000590436 HAP1P54257 671 aaPredicted RBP27.06■■□□□ 1.92
TCF3-213ENST00000590436 CABLES1Q8TDN4 633 aa27.06■■□□□ 1.92
TCF3-213ENST00000590436 ANP32CO43423 234 aa27.05■■□□□ 1.92
TCF3-213ENST00000590436 GCP02774 474 aa27.05■■□□□ 1.92
TCF3-213ENST00000590436 RALBP1Q15311 655 aa27.05■■□□□ 1.92
TCF3-213ENST00000590436 NFAT5O94916 1531 aa27.05■■□□□ 1.92
TCF3-213ENST00000590436 SOX12O15370 315 aa27.03■■□□□ 1.92
TCF3-213ENST00000590436 TNNT2P45379 298 aaPredicted RBP27.03■■□□□ 1.92
TCF3-213ENST00000590436 SPATA31A6Q5VVP1 1343 aa27.03■■□□□ 1.92
TCF3-213ENST00000590436 AATKQ6ZMQ8 1374 aa27.02■■□□□ 1.92
TCF3-213ENST00000590436 PRKRIP1Q9H875 184 aaPredicted RBP27.02■■□□□ 1.92
TCF3-213ENST00000590436 MAP2P11137 1827 aaKnown RBP26.98■■□□□ 1.91
TCF3-213ENST00000590436 LTN1O94822 1766 aa26.98■■□□□ 1.91
TCF3-213ENST00000590436 CPDO75976 1380 aa26.97■■□□□ 1.91
TCF3-213ENST00000590436 NUTM2BA6NNL0 878 aaPredicted RBP26.96■■□□□ 1.91
TCF3-213ENST00000590436 NUTM2EB1AL46 878 aaPredicted RBP26.96■■□□□ 1.91
TCF3-213ENST00000590436 ZC3H6P61129 1189 aaKnown RBP26.96■■□□□ 1.91
TCF3-213ENST00000590436 NUTM2AQ8IVF1 878 aaPredicted RBP26.96■■□□□ 1.91
TCF3-213ENST00000590436 MYBBP1AQ9BQG0 1328 aaKnown RBP26.95■■□□□ 1.91
TCF3-213ENST00000590436 MAP3K19Q56UN5 1328 aa26.94■■□□□ 1.9
TCF3-213ENST00000590436 FBLN1P23142 703 aa26.94■■□□□ 1.9
TCF3-213ENST00000590436 PPP2R1AP30153 589 aa26.94■■□□□ 1.9
TCF3-213ENST00000590436 RRS1Q15050 365 aaKnown RBP26.94■■□□□ 1.9
TCF3-213ENST00000590436 ARHGEF25Q86VW2 580 aa26.94■■□□□ 1.9
TCF3-213ENST00000590436 KIAA0232Q92628 1395 aa26.94■■□□□ 1.9
TCF3-213ENST00000590436 SMG6Q86US8 1419 aaKnown RBP26.93■■□□□ 1.9
TCF3-213ENST00000590436 PRDM11Q9NQV5 511 aa26.93■■□□□ 1.9
TCF3-213ENST00000590436 KIF24Q5T7B8 1368 aa26.93■■□□□ 1.9
TCF3-213ENST00000590436 ABCC6O95255 1503 aa26.92■■□□□ 1.9
TCF3-213ENST00000590436 POLKQ9UBT6 870 aa26.92■■□□□ 1.9
TCF3-213ENST00000590436 ZBTB7CA1YPR0 619 aa26.91■■□□□ 1.9
TCF3-213ENST00000590436 EMILIN1Q9Y6C2 1016 aa26.91■■□□□ 1.9
TCF3-213ENST00000590436 RTL1A6NKG5 1358 aa26.91■■□□□ 1.9
TCF3-213ENST00000590436 ADAMTS2O95450 1211 aa26.9■■□□□ 1.9
TCF3-213ENST00000590436 AMPHP49418 695 aa26.9■■□□□ 1.9
TCF3-213ENST00000590436 LRP6O75581 1613 aa26.9■■□□□ 1.9
TCF3-213ENST00000590436 COL14A1Q05707 1796 aaKnown RBP26.89■■□□□ 1.9
TCF3-213ENST00000590436 CDK12Q9NYV4 1490 aaPredicted RBP26.89■■□□□ 1.9
TCF3-213ENST00000590436 PEAK1Q9H792 1746 aa26.89■■□□□ 1.9
TCF3-213ENST00000590436 FLT4P35916 1363 aa26.88■■□□□ 1.89
TCF3-213ENST00000590436 PPM1GO15355 546 aaPredicted RBP26.88■■□□□ 1.89
TCF3-213ENST00000590436 MTHFSP49914 203 aa26.88■■□□□ 1.89
TCF3-213ENST00000590436 COL18A1P39060 1754 aa26.86■■□□□ 1.89
TCF3-213ENST00000590436 CHRNA2Q15822 529 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms