RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 SLIT2O94813 1529 aa19.66■□□□□ 0.74
NEDD4L-228ENST00000590248 PLCH1Q4KWH8 1693 aa19.66■□□□□ 0.74
NEDD4L-228ENST00000590248 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.66■□□□□ 0.74
NEDD4L-228ENST00000590248 NUTM2GQ5VZR2 741 aa19.66■□□□□ 0.74
NEDD4L-228ENST00000590248 GJD4Q96KN9 370 aaPredicted RBP19.66■□□□□ 0.74
NEDD4L-228ENST00000590248 PLEKHG3A1L390 1219 aa19.65■□□□□ 0.74
NEDD4L-228ENST00000590248 TONSLQ96HA7 1378 aa19.64■□□□□ 0.73
NEDD4L-228ENST00000590248 PPIP5K1Q6PFW1 1433 aa19.64■□□□□ 0.73
NEDD4L-228ENST00000590248 CRYBG1Q9Y4K1 1723 aa19.64■□□□□ 0.73
NEDD4L-228ENST00000590248 POLR3AO14802 1390 aaPredicted RBP19.63■□□□□ 0.73
NEDD4L-228ENST00000590248 CABP1Q9NZU7 370 aa19.62■□□□□ 0.73
NEDD4L-228ENST00000590248 NWD2Q9ULI1 1742 aa19.62■□□□□ 0.73
NEDD4L-228ENST00000590248 GLI3P10071 1580 aa19.61■□□□□ 0.73
NEDD4L-228ENST00000590248 CARD11Q9BXL7 1154 aa19.6■□□□□ 0.73
NEDD4L-228ENST00000590248 CCDC9Q9Y3X0 531 aaKnown RBP19.6■□□□□ 0.73
NEDD4L-228ENST00000590248 RALGAPBQ86X10 1494 aa19.6■□□□□ 0.73
NEDD4L-228ENST00000590248 EVC2Q86UK5 1308 aa19.59■□□□□ 0.73
NEDD4L-228ENST00000590248 ABTB2Q8N961 1025 aa19.59■□□□□ 0.73
NEDD4L-228ENST00000590248 BTG4Q9NY30 223 aa19.59■□□□□ 0.73
NEDD4L-228ENST00000590248 BRWD3Q6RI45 1802 aa19.59■□□□□ 0.73
NEDD4L-228ENST00000590248 PHRF1Q9P1Y6 1649 aaKnown RBP19.58■□□□□ 0.72
NEDD4L-228ENST00000590248 COL14A1Q05707 1796 aaKnown RBP19.57■□□□□ 0.72
NEDD4L-228ENST00000590248 NRAPQ86VF7 1730 aa19.57■□□□□ 0.72
NEDD4L-228ENST00000590248 ZC3H6P61129 1189 aaKnown RBP19.57■□□□□ 0.72
NEDD4L-228ENST00000590248 VPS72Q15906 364 aa19.57■□□□□ 0.72
NEDD4L-228ENST00000590248 CHRNA2Q15822 529 aa19.56■□□□□ 0.72
NEDD4L-228ENST00000590248 KIAA0232Q92628 1395 aa19.55■□□□□ 0.72
NEDD4L-228ENST00000590248 PCGF6Q9BYE7 350 aa19.54■□□□□ 0.72
NEDD4L-228ENST00000590248 PRDM11Q9NQV5 511 aa19.54■□□□□ 0.72
NEDD4L-228ENST00000590248 SEPT12Q8IYM1 358 aa19.52■□□□□ 0.72
NEDD4L-228ENST00000590248 ATAD2Q6PL18 1390 aa19.52■□□□□ 0.72
NEDD4L-228ENST00000590248 AKAP12Q02952 1782 aa19.51■□□□□ 0.71
NEDD4L-228ENST00000590248 USP6P35125 1406 aa19.51■□□□□ 0.71
NEDD4L-228ENST00000590248 NLRP13Q86W25 1043 aa19.5■□□□□ 0.71
NEDD4L-228ENST00000590248 NRKQ7Z2Y5 1582 aa19.49■□□□□ 0.71
NEDD4L-228ENST00000590248 FAM98CQ17RN3 349 aaKnown RBP19.49■□□□□ 0.71
NEDD4L-228ENST00000590248 STRN4Q9NRL3 753 aa19.49■□□□□ 0.71
NEDD4L-228ENST00000590248 EP400Q96L91 3159 aa19.48■□□□□ 0.71
NEDD4L-228ENST00000590248 A0A0G2JS52 829 aa19.48■□□□□ 0.71
NEDD4L-228ENST00000590248 ONECUT3O60422 494 aaPredicted RBP19.48■□□□□ 0.71
NEDD4L-228ENST00000590248 NLRP6P59044 892 aa19.48■□□□□ 0.71
NEDD4L-228ENST00000590248 MYT1Q01538 1121 aa19.48■□□□□ 0.71
NEDD4L-228ENST00000590248 GCP02774 474 aa19.47■□□□□ 0.71
NEDD4L-228ENST00000590248 SSH2Q76I76 1423 aa19.47■□□□□ 0.71
NEDD4L-228ENST00000590248 USP19O94966 1318 aa19.47■□□□□ 0.71
NEDD4L-228ENST00000590248 PIK3C2AO00443 1686 aa19.46■□□□□ 0.71
NEDD4L-228ENST00000590248 ZBTB7CA1YPR0 619 aa19.46■□□□□ 0.71
NEDD4L-228ENST00000590248 SPATA31A5Q5VU36 1347 aa19.46■□□□□ 0.71
NEDD4L-228ENST00000590248 SPATA31A7Q8IWB4 1347 aa19.46■□□□□ 0.71
NEDD4L-228ENST00000590248 ST20-MTHFSA0A0A6YYL1 179 aa19.45■□□□□ 0.7
NEDD4L-228ENST00000590248 TMC1Q8TDI8 760 aa19.45■□□□□ 0.7
NEDD4L-228ENST00000590248 ZNF692Q9BU19 519 aaPredicted RBP19.45■□□□□ 0.7
NEDD4L-228ENST00000590248 TTC21BQ7Z4L5 1316 aa19.45■□□□□ 0.7
NEDD4L-228ENST00000590248 SBNO2Q9Y2G9 1366 aa19.44■□□□□ 0.7
NEDD4L-228ENST00000590248 CAMTA1Q9Y6Y1 1673 aa19.44■□□□□ 0.7
NEDD4L-228ENST00000590248 EVA1CP58658 441 aa19.44■□□□□ 0.7
NEDD4L-228ENST00000590248 USP35Q9P2H5 1018 aa19.44■□□□□ 0.7
NEDD4L-228ENST00000590248 BRD4O60885 1362 aaPredicted RBP19.44■□□□□ 0.7
NEDD4L-228ENST00000590248 KRT27Q7Z3Y8 459 aa19.43■□□□□ 0.7
NEDD4L-228ENST00000590248 SLC12A5Q9H2X9 1139 aa19.43■□□□□ 0.7
NEDD4L-228ENST00000590248 KTN1Q86UP2 1357 aaKnown RBP19.43■□□□□ 0.7
NEDD4L-228ENST00000590248 CPSF1Q10570 1443 aaKnown RBP19.42■□□□□ 0.7
NEDD4L-228ENST00000590248 SOX12O15370 315 aa19.42■□□□□ 0.7
NEDD4L-228ENST00000590248 MON2Q7Z3U7 1717 aa19.42■□□□□ 0.7
NEDD4L-228ENST00000590248 LMO7Q8WWI1 1683 aa19.41■□□□□ 0.7
NEDD4L-228ENST00000590248 FAM182BQ5T319 152 aa19.41■□□□□ 0.7
NEDD4L-228ENST00000590248 LARP1Q6PKG0 1096 aaKnown RBP19.41■□□□□ 0.7
NEDD4L-228ENST00000590248 TESK2Q96S53 571 aa19.41■□□□□ 0.7
NEDD4L-228ENST00000590248 ZRANB1Q9UGI0 708 aa19.41■□□□□ 0.7
NEDD4L-228ENST00000590248 SPATA31A1Q5TZJ5 1347 aa19.41■□□□□ 0.7
NEDD4L-228ENST00000590248 RGPD5Q99666 1765 aa19.41■□□□□ 0.7
NEDD4L-228ENST00000590248 CPDO75976 1380 aa19.41■□□□□ 0.7
NEDD4L-228ENST00000590248 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.4■□□□□ 0.7
NEDD4L-228ENST00000590248 CD163L1Q9NR16 1453 aa19.39■□□□□ 0.69
NEDD4L-228ENST00000590248 SLIT3O75094 1523 aa19.39■□□□□ 0.69
NEDD4L-228ENST00000590248 COL18A1P39060 1754 aa19.37■□□□□ 0.69
NEDD4L-228ENST00000590248 CCDC125Q86Z20 511 aa19.37■□□□□ 0.69
NEDD4L-228ENST00000590248 THSD7AQ9UPZ6 1657 aa19.36■□□□□ 0.69
NEDD4L-228ENST00000590248 TTC21AQ8NDW8 1320 aa19.36■□□□□ 0.69
NEDD4L-228ENST00000590248 DEFB132Q7Z7B7 95 aa19.36■□□□□ 0.69
NEDD4L-228ENST00000590248 NME9Q86XW9 330 aa19.35■□□□□ 0.69
NEDD4L-228ENST00000590248 AXIN2Q9Y2T1 843 aa19.35■□□□□ 0.69
NEDD4L-228ENST00000590248 COL5A2P05997 1499 aaPredicted RBP19.35■□□□□ 0.69
NEDD4L-228ENST00000590248 USP47Q96K76 1375 aa19.34■□□□□ 0.69
NEDD4L-228ENST00000590248 HDGFL2Q7Z4V5 671 aaPredicted RBP19.34■□□□□ 0.69
NEDD4L-228ENST00000590248 BLMP54132 1417 aaPredicted RBP19.34■□□□□ 0.69
NEDD4L-228ENST00000590248 KCNH5Q8NCM2 988 aa19.33■□□□□ 0.68
NEDD4L-228ENST00000590248 A0A1W2PP64 1363 aa19.32■□□□□ 0.68
NEDD4L-228ENST00000590248 ARHGEF25Q86VW2 580 aa19.32■□□□□ 0.68
NEDD4L-228ENST00000590248 CCER1Q8TC90 406 aaPredicted RBP19.32■□□□□ 0.68
NEDD4L-228ENST00000590248 PUS7Q96PZ0 661 aaKnown RBP19.32■□□□□ 0.68
NEDD4L-228ENST00000590248 AATKQ6ZMQ8 1374 aa19.32■□□□□ 0.68
NEDD4L-228ENST00000590248 CLSPNQ9HAW4 1339 aa19.31■□□□□ 0.68
NEDD4L-228ENST00000590248 TCP11L2Q8N4U5 519 aa19.31■□□□□ 0.68
NEDD4L-228ENST00000590248 TERF2IPQ9NYB0 399 aa19.31■□□□□ 0.68
NEDD4L-228ENST00000590248 SF3B2Q13435 895 aaKnown RBP19.3■□□□□ 0.68
NEDD4L-228ENST00000590248 BARGINQ6ZT62 677 aa19.3■□□□□ 0.68
NEDD4L-228ENST00000590248 TIMELESSQ9UNS1 1208 aa19.3■□□□□ 0.68
NEDD4L-228ENST00000590248 TOM1L2Q6ZVM7 507 aa19.29■□□□□ 0.68
NEDD4L-228ENST00000590248 NFAT5O94916 1531 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms