RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 NBPF1Q3BBV0 1214 aa25.94■■□□□ 1.74
PRKCSH-211ENST00000590098 BTG4Q9NY30 223 aa25.94■■□□□ 1.74
PRKCSH-211ENST00000590098 COL14A1Q05707 1796 aaKnown RBP25.94■■□□□ 1.74
PRKCSH-211ENST00000590098 CCDC61Q9Y6R9 512 aa25.91■■□□□ 1.74
PRKCSH-211ENST00000590098 NRAPQ86VF7 1730 aa25.91■■□□□ 1.74
PRKCSH-211ENST00000590098 A0A0G2JS52 829 aa25.9■■□□□ 1.74
PRKCSH-211ENST00000590098 MYT1Q01538 1121 aa25.9■■□□□ 1.74
PRKCSH-211ENST00000590098 SRCAPQ6ZRS2 3230 aa25.9■■□□□ 1.74
PRKCSH-211ENST00000590098 CRYBG1Q9Y4K1 1723 aa25.89■■□□□ 1.74
PRKCSH-211ENST00000590098 DEFB132Q7Z7B7 95 aa25.89■■□□□ 1.74
PRKCSH-211ENST00000590098 ZRANB1Q9UGI0 708 aa25.89■■□□□ 1.74
PRKCSH-211ENST00000590098 BLMP54132 1417 aaPredicted RBP25.88■■□□□ 1.73
PRKCSH-211ENST00000590098 KRT27Q7Z3Y8 459 aa25.88■■□□□ 1.73
PRKCSH-211ENST00000590098 PRDM11Q9NQV5 511 aa25.88■■□□□ 1.73
PRKCSH-211ENST00000590098 ACEP12821 1306 aa25.88■■□□□ 1.73
PRKCSH-211ENST00000590098 TOPAZ1Q8N9V7 1692 aa25.87■■□□□ 1.73
PRKCSH-211ENST00000590098 SF3B2Q13435 895 aaKnown RBP25.87■■□□□ 1.73
PRKCSH-211ENST00000590098 NBPF8Q3BBV2 869 aa25.87■■□□□ 1.73
PRKCSH-211ENST00000590098 POLR3AO14802 1390 aaPredicted RBP25.86■■□□□ 1.73
PRKCSH-211ENST00000590098 PLEKHG3A1L390 1219 aa25.86■■□□□ 1.73
PRKCSH-211ENST00000590098 FAM98CQ17RN3 349 aaKnown RBP25.86■■□□□ 1.73
PRKCSH-211ENST00000590098 CENPJQ9HC77 1338 aaPredicted RBP25.86■■□□□ 1.73
PRKCSH-211ENST00000590098 SRPK2P78362 688 aaKnown RBP25.85■■□□□ 1.73
PRKCSH-211ENST00000590098 NUTM2GQ5VZR2 741 aa25.84■■□□□ 1.73
PRKCSH-211ENST00000590098 L3MBTL2Q969R5 705 aa25.84■■□□□ 1.73
PRKCSH-211ENST00000590098 PHRF1Q9P1Y6 1649 aaKnown RBP25.82■■□□□ 1.72
PRKCSH-211ENST00000590098 SPATA31A5Q5VU36 1347 aa25.82■■□□□ 1.72
PRKCSH-211ENST00000590098 SPATA31A7Q8IWB4 1347 aa25.82■■□□□ 1.72
PRKCSH-211ENST00000590098 KIAA0232Q92628 1395 aa25.82■■□□□ 1.72
PRKCSH-211ENST00000590098 QRICH2Q9H0J4 1663 aa25.8■■□□□ 1.72
PRKCSH-211ENST00000590098 ZC3H6P61129 1189 aaKnown RBP25.8■■□□□ 1.72
PRKCSH-211ENST00000590098 CHRNA2Q15822 529 aa25.8■■□□□ 1.72
PRKCSH-211ENST00000590098 ABTB2Q8N961 1025 aa25.8■■□□□ 1.72
PRKCSH-211ENST00000590098 FAM182BQ5T319 152 aa25.79■■□□□ 1.72
PRKCSH-211ENST00000590098 SIN3AQ96ST3 1273 aa25.79■■□□□ 1.72
PRKCSH-211ENST00000590098 CABP2Q9NPB3 220 aa25.79■■□□□ 1.72
PRKCSH-211ENST00000590098 PPIP5K1Q6PFW1 1433 aa25.79■■□□□ 1.72
PRKCSH-211ENST00000590098 NEUROD1Q13562 356 aa25.78■■□□□ 1.72
PRKCSH-211ENST00000590098 STRN4Q9NRL3 753 aa25.76■■□□□ 1.71
PRKCSH-211ENST00000590098 SPATA31A1Q5TZJ5 1347 aa25.73■■□□□ 1.71
PRKCSH-211ENST00000590098 EVA1CP58658 441 aa25.73■■□□□ 1.71
PRKCSH-211ENST00000590098 NLRP13Q86W25 1043 aa25.73■■□□□ 1.71
PRKCSH-211ENST00000590098 TRPM1Q7Z4N2 1603 aa25.73■■□□□ 1.71
PRKCSH-211ENST00000590098 BRD4O60885 1362 aaPredicted RBP25.71■■□□□ 1.71
PRKCSH-211ENST00000590098 EVC2Q86UK5 1308 aa25.71■■□□□ 1.71
PRKCSH-211ENST00000590098 CABP1Q9NZU7 370 aa25.71■■□□□ 1.71
PRKCSH-211ENST00000590098 THSD7AQ9UPZ6 1657 aa25.71■■□□□ 1.71
PRKCSH-211ENST00000590098 NRKQ7Z2Y5 1582 aa25.7■■□□□ 1.71
PRKCSH-211ENST00000590098 BAG6P46379 1132 aa25.7■■□□□ 1.7
PRKCSH-211ENST00000590098 ROCK2O75116 1388 aaKnown RBP25.69■■□□□ 1.7
PRKCSH-211ENST00000590098 USP19O94966 1318 aa25.69■■□□□ 1.7
PRKCSH-211ENST00000590098 CPDO75976 1380 aa25.69■■□□□ 1.7
PRKCSH-211ENST00000590098 USP35Q9P2H5 1018 aa25.68■■□□□ 1.7
PRKCSH-211ENST00000590098 GCP02774 474 aa25.67■■□□□ 1.7
PRKCSH-211ENST00000590098 RGPD1P0DJD0 1748 aa25.66■■□□□ 1.7
PRKCSH-211ENST00000590098 SSH2Q76I76 1423 aa25.66■■□□□ 1.7
PRKCSH-211ENST00000590098 USP6P35125 1406 aa25.65■■□□□ 1.7
PRKCSH-211ENST00000590098 EN1Q05925 392 aaPredicted RBP25.65■■□□□ 1.7
PRKCSH-211ENST00000590098 CAMTA1Q9Y6Y1 1673 aa25.64■■□□□ 1.7
PRKCSH-211ENST00000590098 NLRP6P59044 892 aa25.64■■□□□ 1.7
PRKCSH-211ENST00000590098 LARP1Q6PKG0 1096 aaKnown RBP25.64■■□□□ 1.7
PRKCSH-211ENST00000590098 LMO7Q8WWI1 1683 aa25.62■■□□□ 1.69
PRKCSH-211ENST00000590098 BARGINQ6ZT62 677 aa25.62■■□□□ 1.69
PRKCSH-211ENST00000590098 PSDA5PKW4 1024 aaPredicted RBP25.61■■□□□ 1.69
PRKCSH-211ENST00000590098 FAM196AQ6ZSG2 479 aa25.61■■□□□ 1.69
PRKCSH-211ENST00000590098 ZBTB7CA1YPR0 619 aa25.6■■□□□ 1.69
PRKCSH-211ENST00000590098 PDE3BQ13370 1112 aa25.6■■□□□ 1.69
PRKCSH-211ENST00000590098 TCP11L2Q8N4U5 519 aa25.6■■□□□ 1.69
PRKCSH-211ENST00000590098 ZNF692Q9BU19 519 aaPredicted RBP25.59■■□□□ 1.69
PRKCSH-211ENST00000590098 TRIM37O94972 964 aa25.58■■□□□ 1.69
PRKCSH-211ENST00000590098 THRAP3Q9Y2W1 955 aaKnown RBP25.57■■□□□ 1.68
PRKCSH-211ENST00000590098 TNS1Q9HBL0 1735 aaKnown RBP25.57■■□□□ 1.68
PRKCSH-211ENST00000590098 EZH2Q15910 746 aaKnown RBP25.56■■□□□ 1.68
PRKCSH-211ENST00000590098 SLIT3O75094 1523 aa25.56■■□□□ 1.68
PRKCSH-211ENST00000590098 PIK3C2AO00443 1686 aa25.55■■□□□ 1.68
PRKCSH-211ENST00000590098 COL5A2P05997 1499 aaPredicted RBP25.55■■□□□ 1.68
PRKCSH-211ENST00000590098 AKAP12Q02952 1782 aa25.54■■□□□ 1.68
PRKCSH-211ENST00000590098 AATKQ6ZMQ8 1374 aa25.54■■□□□ 1.68
PRKCSH-211ENST00000590098 DISP2A7MBM2 1401 aa25.54■■□□□ 1.68
PRKCSH-211ENST00000590098 CAMKK2Q96RR4 588 aa25.53■■□□□ 1.68
PRKCSH-211ENST00000590098 CARD11Q9BXL7 1154 aa25.53■■□□□ 1.68
PRKCSH-211ENST00000590098 TTC21BQ7Z4L5 1316 aa25.53■■□□□ 1.68
PRKCSH-211ENST00000590098 CRB1P82279 1406 aa25.52■■□□□ 1.68
PRKCSH-211ENST00000590098 KCNH5Q8NCM2 988 aa25.51■■□□□ 1.67
PRKCSH-211ENST00000590098 TTC21AQ8NDW8 1320 aa25.51■■□□□ 1.67
PRKCSH-211ENST00000590098 TONSLQ96HA7 1378 aa25.51■■□□□ 1.67
PRKCSH-211ENST00000590098 APBA3O96018 575 aa25.5■■□□□ 1.67
PRKCSH-211ENST00000590098 KTN1Q86UP2 1357 aaKnown RBP25.5■■□□□ 1.67
PRKCSH-211ENST00000590098 SBNO2Q9Y2G9 1366 aa25.49■■□□□ 1.67
PRKCSH-211ENST00000590098 R3HDM1Q15032 1099 aaKnown RBP25.49■■□□□ 1.67
PRKCSH-211ENST00000590098 PARP4Q9UKK3 1724 aaKnown RBP25.49■■□□□ 1.67
PRKCSH-211ENST00000590098 TOM1L2Q6ZVM7 507 aa25.48■■□□□ 1.67
PRKCSH-211ENST00000590098 AXIN2Q9Y2T1 843 aa25.48■■□□□ 1.67
PRKCSH-211ENST00000590098 CPSF1Q10570 1443 aaKnown RBP25.47■■□□□ 1.67
PRKCSH-211ENST00000590098 COL18A1P39060 1754 aa25.47■■□□□ 1.67
PRKCSH-211ENST00000590098 SOX12O15370 315 aa25.47■■□□□ 1.67
PRKCSH-211ENST00000590098 C11orf95C9JLR9 678 aaPredicted RBP25.45■■□□□ 1.66
PRKCSH-211ENST00000590098 ARHGEF25Q86VW2 580 aa25.45■■□□□ 1.66
PRKCSH-211ENST00000590098 LRP5O75197 1615 aa25.45■■□□□ 1.66
PRKCSH-211ENST00000590098 PARD3Q8TEW0 1356 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms