RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-222ENST00000589235 CCDC125Q86Z20 511 aa30.48■■■□□ 2.47
CIRBP-222ENST00000589235 POLR3AO14802 1390 aaPredicted RBP30.47■■■□□ 2.47
CIRBP-222ENST00000589235 ALS2Q96Q42 1657 aa30.46■■■□□ 2.47
CIRBP-222ENST00000589235 BTG4Q9NY30 223 aa30.46■■■□□ 2.47
CIRBP-222ENST00000589235 NWD2Q9ULI1 1742 aa30.44■■■□□ 2.46
CIRBP-222ENST00000589235 ABCA3Q99758 1704 aa30.44■■■□□ 2.46
CIRBP-222ENST00000589235 ROCK2O75116 1388 aaKnown RBP30.42■■■□□ 2.46
CIRBP-222ENST00000589235 SEPT12Q8IYM1 358 aa30.42■■■□□ 2.46
CIRBP-222ENST00000589235 CABP2Q9NPB3 220 aa30.42■■■□□ 2.46
CIRBP-222ENST00000589235 PRDM11Q9NQV5 511 aa30.42■■■□□ 2.46
CIRBP-222ENST00000589235 GLI3P10071 1580 aa30.41■■■□□ 2.46
CIRBP-222ENST00000589235 ONECUT3O60422 494 aaPredicted RBP30.41■■■□□ 2.46
CIRBP-222ENST00000589235 PLCH1Q4KWH8 1693 aa30.41■■■□□ 2.46
CIRBP-222ENST00000589235 EVC2Q86UK5 1308 aa30.4■■■□□ 2.46
CIRBP-222ENST00000589235 PPIP5K1Q6PFW1 1433 aa30.39■■■□□ 2.46
CIRBP-222ENST00000589235 ABTB2Q8N961 1025 aa30.39■■■□□ 2.46
CIRBP-222ENST00000589235 COL14A1Q05707 1796 aaKnown RBP30.37■■■□□ 2.45
CIRBP-222ENST00000589235 A0A0G2JS52 829 aa30.37■■■□□ 2.45
CIRBP-222ENST00000589235 MYT1Q01538 1121 aa30.37■■■□□ 2.45
CIRBP-222ENST00000589235 NUTM2GQ5VZR2 741 aa30.37■■■□□ 2.45
CIRBP-222ENST00000589235 TOPAZ1Q8N9V7 1692 aa30.36■■■□□ 2.45
CIRBP-222ENST00000589235 BRD4O60885 1362 aaPredicted RBP30.36■■■□□ 2.45
CIRBP-222ENST00000589235 TRIM26Q12899 539 aaPredicted RBP30.34■■■□□ 2.45
CIRBP-222ENST00000589235 NLRP13Q86W25 1043 aa30.34■■■□□ 2.45
CIRBP-222ENST00000589235 CABP1Q9NZU7 370 aa30.34■■■□□ 2.45
CIRBP-222ENST00000589235 TRPM1Q7Z4N2 1603 aa30.33■■■□□ 2.45
CIRBP-222ENST00000589235 KRT27Q7Z3Y8 459 aa30.33■■■□□ 2.45
CIRBP-222ENST00000589235 QRICH2Q9H0J4 1663 aa30.33■■■□□ 2.45
CIRBP-222ENST00000589235 KIAA0232Q92628 1395 aa30.32■■■□□ 2.44
CIRBP-222ENST00000589235 ZC3H6P61129 1189 aaKnown RBP30.32■■■□□ 2.44
CIRBP-222ENST00000589235 SF3B2Q13435 895 aaKnown RBP30.32■■■□□ 2.44
CIRBP-222ENST00000589235 FAM98CQ17RN3 349 aaKnown RBP30.31■■■□□ 2.44
CIRBP-222ENST00000589235 TONSLQ96HA7 1378 aa30.3■■■□□ 2.44
CIRBP-222ENST00000589235 SPATA31A5Q5VU36 1347 aa30.29■■■□□ 2.44
CIRBP-222ENST00000589235 SPATA31A7Q8IWB4 1347 aa30.29■■■□□ 2.44
CIRBP-222ENST00000589235 EVA1CP58658 441 aa30.28■■■□□ 2.44
CIRBP-222ENST00000589235 CHRNA2Q15822 529 aa30.28■■■□□ 2.44
CIRBP-222ENST00000589235 BLMP54132 1417 aaPredicted RBP30.28■■■□□ 2.44
CIRBP-222ENST00000589235 CRYBG1Q9Y4K1 1723 aa30.27■■■□□ 2.44
CIRBP-222ENST00000589235 NRAPQ86VF7 1730 aa30.26■■■□□ 2.43
CIRBP-222ENST00000589235 ZNF692Q9BU19 519 aaPredicted RBP30.26■■■□□ 2.43
CIRBP-222ENST00000589235 CARD11Q9BXL7 1154 aa30.26■■■□□ 2.43
CIRBP-222ENST00000589235 STRN4Q9NRL3 753 aa30.25■■■□□ 2.43
CIRBP-222ENST00000589235 ZRANB1Q9UGI0 708 aa30.24■■■□□ 2.43
CIRBP-222ENST00000589235 USP19O94966 1318 aa30.23■■■□□ 2.43
CIRBP-222ENST00000589235 GCP02774 474 aa30.23■■■□□ 2.43
CIRBP-222ENST00000589235 USP6P35125 1406 aa30.22■■■□□ 2.43
CIRBP-222ENST00000589235 PHRF1Q9P1Y6 1649 aaKnown RBP30.22■■■□□ 2.43
CIRBP-222ENST00000589235 NLRP6P59044 892 aa30.22■■■□□ 2.43
CIRBP-222ENST00000589235 CPDO75976 1380 aa30.21■■■□□ 2.43
CIRBP-222ENST00000589235 SPATA31A1Q5TZJ5 1347 aa30.21■■■□□ 2.43
CIRBP-222ENST00000589235 BRWD3Q6RI45 1802 aa30.18■■■□□ 2.42
CIRBP-222ENST00000589235 NRKQ7Z2Y5 1582 aa30.15■■■□□ 2.42
CIRBP-222ENST00000589235 SBNO2Q9Y2G9 1366 aa30.15■■■□□ 2.42
CIRBP-222ENST00000589235 USP35Q9P2H5 1018 aa30.13■■■□□ 2.41
CIRBP-222ENST00000589235 SSH2Q76I76 1423 aa30.13■■■□□ 2.41
CIRBP-222ENST00000589235 ZBTB7CA1YPR0 619 aa30.12■■■□□ 2.41
CIRBP-222ENST00000589235 BARGINQ6ZT62 677 aa30.12■■■□□ 2.41
CIRBP-222ENST00000589235 TTC21AQ8NDW8 1320 aa30.12■■■□□ 2.41
CIRBP-222ENST00000589235 BAG6P46379 1132 aa30.11■■■□□ 2.41
CIRBP-222ENST00000589235 DEFB132Q7Z7B7 95 aa30.11■■■□□ 2.41
CIRBP-222ENST00000589235 KCNH5Q8NCM2 988 aa30.11■■■□□ 2.41
CIRBP-222ENST00000589235 TTC21BQ7Z4L5 1316 aa30.11■■■□□ 2.41
CIRBP-222ENST00000589235 LARP1Q6PKG0 1096 aaKnown RBP30.1■■■□□ 2.41
CIRBP-222ENST00000589235 THRAP3Q9Y2W1 955 aaKnown RBP30.1■■■□□ 2.41
CIRBP-222ENST00000589235 TCP11L2Q8N4U5 519 aa30.09■■■□□ 2.41
CIRBP-222ENST00000589235 KTN1Q86UP2 1357 aaKnown RBP30.08■■■□□ 2.41
CIRBP-222ENST00000589235 SLC24A1O60721 1099 aa30.08■■■□□ 2.41
CIRBP-222ENST00000589235 CAMTA1Q9Y6Y1 1673 aa30.07■■■□□ 2.41
CIRBP-222ENST00000589235 PDE3BQ13370 1112 aa30.07■■■□□ 2.4
CIRBP-222ENST00000589235 AATKQ6ZMQ8 1374 aa30.06■■■□□ 2.4
CIRBP-222ENST00000589235 FAM196AQ6ZSG2 479 aa30.06■■■□□ 2.4
CIRBP-222ENST00000589235 CPSF1Q10570 1443 aaKnown RBP30.05■■■□□ 2.4
CIRBP-222ENST00000589235 THSD7AQ9UPZ6 1657 aa30.05■■■□□ 2.4
CIRBP-222ENST00000589235 TMC1Q8TDI8 760 aa30.05■■■□□ 2.4
CIRBP-222ENST00000589235 HDGFL2Q7Z4V5 671 aaPredicted RBP30.04■■■□□ 2.4
CIRBP-222ENST00000589235 PUS7Q96PZ0 661 aaKnown RBP30.04■■■□□ 2.4
CIRBP-222ENST00000589235 SLIT3O75094 1523 aa30.04■■■□□ 2.4
CIRBP-222ENST00000589235 FAM182BQ5T319 152 aa30.03■■■□□ 2.4
CIRBP-222ENST00000589235 EP400Q96L91 3159 aa30.03■■■□□ 2.4
CIRBP-222ENST00000589235 LMO7Q8WWI1 1683 aa30.02■■■□□ 2.4
CIRBP-222ENST00000589235 COL5A2P05997 1499 aaPredicted RBP30.01■■■□□ 2.4
CIRBP-222ENST00000589235 CRB1P82279 1406 aa29.99■■■□□ 2.39
CIRBP-222ENST00000589235 TERF2IPQ9NYB0 399 aa29.99■■■□□ 2.39
CIRBP-222ENST00000589235 PIK3C2AO00443 1686 aa29.98■■■□□ 2.39
CIRBP-222ENST00000589235 TOM1L2Q6ZVM7 507 aa29.98■■■□□ 2.39
CIRBP-222ENST00000589235 C11orf95C9JLR9 678 aaPredicted RBP29.97■■■□□ 2.39
CIRBP-222ENST00000589235 SOX12O15370 315 aa29.97■■■□□ 2.39
CIRBP-222ENST00000589235 ARHGEF25Q86VW2 580 aa29.97■■■□□ 2.39
CIRBP-222ENST00000589235 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.97■■■□□ 2.39
CIRBP-222ENST00000589235 AKAP12Q02952 1782 aa29.97■■■□□ 2.39
CIRBP-222ENST00000589235 SLC12A5Q9H2X9 1139 aa29.95■■■□□ 2.39
CIRBP-222ENST00000589235 ST20-MTHFSA0A0A6YYL1 179 aa29.94■■■□□ 2.38
CIRBP-222ENST00000589235 EN1Q05925 392 aaPredicted RBP29.94■■■□□ 2.38
CIRBP-222ENST00000589235 TRIM37O94972 964 aa29.93■■■□□ 2.38
CIRBP-222ENST00000589235 CSB-PGBD3P0DP91 1061 aa29.93■■■□□ 2.38
CIRBP-222ENST00000589235 RGPD1P0DJD0 1748 aa29.93■■■□□ 2.38
CIRBP-222ENST00000589235 WDR17Q8IZU2 1322 aa29.93■■■□□ 2.38
CIRBP-222ENST00000589235 AXIN2Q9Y2T1 843 aa29.92■■■□□ 2.38
CIRBP-222ENST00000589235 USP31Q70CQ4 1352 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms